RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CHL1O00533 1208 aa19.44■□□□□ 0.7
UFD1-209ENST00000489406 TTYH1Q9H313 450 aaPredicted RBP19.44■□□□□ 0.7
UFD1-209ENST00000489406 HMX1Q9NP08 348 aaPredicted RBP19.44■□□□□ 0.7
UFD1-209ENST00000489406 HOXB7P09629 217 aa19.43■□□□□ 0.7
UFD1-209ENST00000489406 CRKP46108 304 aa19.43■□□□□ 0.7
UFD1-209ENST00000489406 C15orf52Q6ZUT6 534 aaKnown RBP19.43■□□□□ 0.7
UFD1-209ENST00000489406 MIGA2Q7L4E1 593 aa19.43■□□□□ 0.7
UFD1-209ENST00000489406 COA7Q96BR5 231 aa19.43■□□□□ 0.7
UFD1-209ENST00000489406 LBHD1Q9BQE6 289 aaPredicted RBP19.43■□□□□ 0.7
UFD1-209ENST00000489406 METTL22Q9BUU2 404 aaPredicted RBP19.43■□□□□ 0.7
UFD1-209ENST00000489406 PNNQ9H307 717 aaKnown RBP19.43■□□□□ 0.7
UFD1-209ENST00000489406 OGDHLQ9ULD0 1010 aa19.43■□□□□ 0.7
UFD1-209ENST00000489406 CDH23Q9H251 3354 aa19.43■□□□□ 0.7
UFD1-209ENST00000489406 ITGA6P23229 1130 aa19.42■□□□□ 0.7
UFD1-209ENST00000489406 TRIM32Q13049 653 aa19.42■□□□□ 0.7
UFD1-209ENST00000489406 LRRC26Q2I0M4 334 aa19.42■□□□□ 0.7
UFD1-209ENST00000489406 MFSD14BQ5SR56 506 aa19.42■□□□□ 0.7
UFD1-209ENST00000489406 USP38Q8NB14 1042 aa19.42■□□□□ 0.7
UFD1-209ENST00000489406 ZNF341Q9BYN7 854 aa19.42■□□□□ 0.7
UFD1-209ENST00000489406 HMGCRP04035 888 aa19.41■□□□□ 0.7
UFD1-209ENST00000489406 DCAF15Q66K64 600 aa19.41■□□□□ 0.7
UFD1-209ENST00000489406 HOOK2Q96ED9 719 aa19.41■□□□□ 0.7
UFD1-209ENST00000489406 MYH3P11055 1940 aa19.41■□□□□ 0.7
UFD1-209ENST00000489406 DUSP27Q5VZP5 1158 aa19.4■□□□□ 0.7
UFD1-209ENST00000489406 LMOD3Q0VAK6 560 aa19.39■□□□□ 0.69
UFD1-209ENST00000489406 SYNGAP1Q96PV0 1343 aa19.39■□□□□ 0.69
UFD1-209ENST00000489406 COL6A1P12109 1028 aa19.38■□□□□ 0.69
UFD1-209ENST00000489406 DOCK3Q8IZD9 2030 aa19.38■□□□□ 0.69
UFD1-209ENST00000489406 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
UFD1-209ENST00000489406 IGKV5-2P06315 115 aa19.37■□□□□ 0.69
UFD1-209ENST00000489406 TMPOP42166 694 aaKnown RBP19.37■□□□□ 0.69
UFD1-209ENST00000489406 SHHQ15465 462 aa19.37■□□□□ 0.69
UFD1-209ENST00000489406 SMCR8Q8TEV9 937 aaPredicted RBP19.37■□□□□ 0.69
UFD1-209ENST00000489406 BDP1A6H8Y1 2624 aa19.36■□□□□ 0.69
UFD1-209ENST00000489406 CXCL11O14625 94 aa19.36■□□□□ 0.69
UFD1-209ENST00000489406 FAM83AQ86UY5 434 aa19.36■□□□□ 0.69
UFD1-209ENST00000489406 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
UFD1-209ENST00000489406 NEUROD2Q15784 382 aa19.35■□□□□ 0.69
UFD1-209ENST00000489406 GRIK5Q16478 980 aa19.35■□□□□ 0.69
UFD1-209ENST00000489406 C9orf50Q5SZB4 431 aa19.35■□□□□ 0.69
UFD1-209ENST00000489406 GADL1Q6ZQY3 521 aa19.35■□□□□ 0.69
UFD1-209ENST00000489406 UBE3BQ7Z3V4 1068 aa19.35■□□□□ 0.69
UFD1-209ENST00000489406 ANKRD13CQ8N6S4 541 aa19.35■□□□□ 0.69
UFD1-209ENST00000489406 ADAMTS19Q8TE59 1207 aa19.35■□□□□ 0.69
UFD1-209ENST00000489406 TMOD2Q9NZR1 351 aa19.35■□□□□ 0.69
UFD1-209ENST00000489406 FASTKD5Q7L8L6 764 aaKnown RBP19.34■□□□□ 0.69
UFD1-209ENST00000489406 ZNF112Q9UJU3 913 aa19.34■□□□□ 0.69
UFD1-209ENST00000489406 DDX58O95786 925 aaKnown RBP19.33■□□□□ 0.68
UFD1-209ENST00000489406 SMAD3P84022 425 aaKnown RBP19.33■□□□□ 0.68
UFD1-209ENST00000489406 CWF19L2Q2TBE0 894 aaKnown RBP19.33■□□□□ 0.68
UFD1-209ENST00000489406 TDRD7Q8NHU6 1098 aaKnown RBP19.33■□□□□ 0.68
UFD1-209ENST00000489406 UHRF1Q96T88 793 aaPredicted RBP19.33■□□□□ 0.68
UFD1-209ENST00000489406 NCOR1O75376 2440 aa19.33■□□□□ 0.68
UFD1-209ENST00000489406 PLIN1O60240 522 aa19.32■□□□□ 0.68
UFD1-209ENST00000489406 SNX27Q96L92 541 aa19.32■□□□□ 0.68
UFD1-209ENST00000489406 A0A0G2JLL6 359 aaPredicted RBP19.31■□□□□ 0.68
UFD1-209ENST00000489406 H7C1W4 665 aa19.31■□□□□ 0.68
UFD1-209ENST00000489406 NOL9Q5SY16 702 aaKnown RBP19.31■□□□□ 0.68
UFD1-209ENST00000489406 FKBP1CQ5VVH2 108 aa19.31■□□□□ 0.68
UFD1-209ENST00000489406 PRRT2Q7Z6L0 340 aaPredicted RBP19.31■□□□□ 0.68
UFD1-209ENST00000489406 ATXN2LQ8WWM7 1075 aaKnown RBP19.31■□□□□ 0.68
UFD1-209ENST00000489406 TRIB2Q92519 343 aa19.31■□□□□ 0.68
UFD1-209ENST00000489406 TEKT1Q969V4 418 aa19.31■□□□□ 0.68
UFD1-209ENST00000489406 PRKAG2Q9UGJ0 569 aa19.31■□□□□ 0.68
UFD1-209ENST00000489406 GJD2Q9UKL4 321 aa19.31■□□□□ 0.68
UFD1-209ENST00000489406 SLC45A1Q9Y2W3 748 aa19.31■□□□□ 0.68
UFD1-209ENST00000489406 ARIH1Q9Y4X5 557 aaPredicted RBP19.31■□□□□ 0.68
UFD1-209ENST00000489406 ZHX2Q9Y6X8 837 aa19.31■□□□□ 0.68
UFD1-209ENST00000489406 ANKRD18BA2A2Z9 1011 aa19.3■□□□□ 0.68
UFD1-209ENST00000489406 ELL2O00472 640 aaPredicted RBP19.3■□□□□ 0.68
UFD1-209ENST00000489406 CSF1RP07333 972 aa19.3■□□□□ 0.68
UFD1-209ENST00000489406 PRKAR2AP13861 404 aaKnown RBP19.3■□□□□ 0.68
UFD1-209ENST00000489406 PPM1EQ8WY54 764 aa19.3■□□□□ 0.68
UFD1-209ENST00000489406 ASB2Q96Q27 587 aa19.3■□□□□ 0.68
UFD1-209ENST00000489406 C1QTNF1Q9BXJ1 281 aa19.3■□□□□ 0.68
UFD1-209ENST00000489406 HCN4Q9Y3Q4 1203 aa19.3■□□□□ 0.68
UFD1-209ENST00000489406 PIEZO1Q92508 2521 aa19.3■□□□□ 0.68
UFD1-209ENST00000489406 RPAP1Q9BWH6 1393 aaPredicted RBP19.3■□□□□ 0.68
UFD1-209ENST00000489406 GYG1P46976 350 aa19.29■□□□□ 0.68
UFD1-209ENST00000489406 HDLBPQ00341 1268 aaKnown RBP19.29■□□□□ 0.68
UFD1-209ENST00000489406 GRIN2CQ14957 1233 aa19.29■□□□□ 0.68
UFD1-209ENST00000489406 MAP3K21Q5TCX8 1036 aa19.29■□□□□ 0.68
UFD1-209ENST00000489406 PLA2G12BQ9BX93 195 aa19.29■□□□□ 0.68
UFD1-209ENST00000489406 CLSPNQ9HAW4 1339 aa19.28■□□□□ 0.68
UFD1-209ENST00000489406 DNAH12Q6ZR08 3092 aa19.28■□□□□ 0.68
UFD1-209ENST00000489406 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
UFD1-209ENST00000489406 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
UFD1-209ENST00000489406 HIBADHP31937 336 aaKnown RBP19.28■□□□□ 0.68
UFD1-209ENST00000489406 NEXNQ0ZGT2 675 aa19.28■□□□□ 0.68
UFD1-209ENST00000489406 FAM110CQ1W6H9 321 aa19.28■□□□□ 0.68
UFD1-209ENST00000489406 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
UFD1-209ENST00000489406 SENP6Q9GZR1 1112 aaPredicted RBP19.28■□□□□ 0.68
UFD1-209ENST00000489406 A0A1B0GUL6 1792 aa19.27■□□□□ 0.68
UFD1-209ENST00000489406 CYP2B6P20813 491 aa19.27■□□□□ 0.68
UFD1-209ENST00000489406 ATN1P54259 1190 aaPredicted RBP19.27■□□□□ 0.68
UFD1-209ENST00000489406 APOBEC3HQ6NTF7 200 aaKnown RBP19.27■□□□□ 0.68
UFD1-209ENST00000489406 KSR2Q6VAB6 950 aa19.27■□□□□ 0.68
UFD1-209ENST00000489406 ALYREFQ86V81 257 aaKnown RBP19.27■□□□□ 0.68
UFD1-209ENST00000489406 ZDHHC15Q96MV8 337 aa19.27■□□□□ 0.68
UFD1-209ENST00000489406 TCP10Q12799 353 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms