RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 HMGCRP04035 888 aa14.89□□□□□ -0.03
HDAC6-233ENST00000489352 TMOD2Q9NZR1 351 aa14.89□□□□□ -0.03
HDAC6-233ENST00000489352 KCNH4Q9UQ05 1017 aa14.89□□□□□ -0.03
HDAC6-233ENST00000489352 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
HDAC6-233ENST00000489352 ARIH1Q9Y4X5 557 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-233ENST00000489352 SYNGAP1Q96PV0 1343 aa14.89□□□□□ -0.03
HDAC6-233ENST00000489352 SMCR8Q8TEV9 937 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-233ENST00000489352 SNX27Q96L92 541 aa14.88□□□□□ -0.03
HDAC6-233ENST00000489352 ZNF341Q9BYN7 854 aa14.88□□□□□ -0.03
HDAC6-233ENST00000489352 DNAH12Q6ZR08 3092 aa14.87□□□□□ -0.03
HDAC6-233ENST00000489352 IL1R1P14778 569 aa14.87□□□□□ -0.03
HDAC6-233ENST00000489352 PPP2R1AP30153 589 aa14.87□□□□□ -0.03
HDAC6-233ENST00000489352 RIPK4P57078 832 aa14.87□□□□□ -0.03
HDAC6-233ENST00000489352 KRT24Q2M2I5 525 aa14.87□□□□□ -0.03
HDAC6-233ENST00000489352 PLEKHF1Q96S99 279 aa14.87□□□□□ -0.03
HDAC6-233ENST00000489352 UHRF1Q96T88 793 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-233ENST00000489352 OGDHLQ9ULD0 1010 aa14.87□□□□□ -0.03
HDAC6-233ENST00000489352 CHRNDQ07001 517 aa14.86□□□□□ -0.03
HDAC6-233ENST00000489352 LMOD3Q0VAK6 560 aa14.86□□□□□ -0.03
HDAC6-233ENST00000489352 MFSD14BQ5SR56 506 aa14.86□□□□□ -0.03
HDAC6-233ENST00000489352 FASTKD5Q7L8L6 764 aaKnown RBP14.86□□□□□ -0.03
HDAC6-233ENST00000489352 ADAMTS19Q8TE59 1207 aa14.86□□□□□ -0.03
HDAC6-233ENST00000489352 ATXN2LQ8WWM7 1075 aaKnown RBP14.86□□□□□ -0.03
HDAC6-233ENST00000489352 PFASO15067 1338 aa14.86□□□□□ -0.03
HDAC6-233ENST00000489352 PIEZO1Q92508 2521 aa14.86□□□□□ -0.03
HDAC6-233ENST00000489352 HOXB7P09629 217 aa14.85□□□□□ -0.03
HDAC6-233ENST00000489352 CRKP46108 304 aa14.85□□□□□ -0.03
HDAC6-233ENST00000489352 SMAD3P84022 425 aaKnown RBP14.85□□□□□ -0.03
HDAC6-233ENST00000489352 LRRC26Q2I0M4 334 aa14.85□□□□□ -0.03
HDAC6-233ENST00000489352 MIGA2Q7L4E1 593 aa14.85□□□□□ -0.03
HDAC6-233ENST00000489352 TTYH1Q9H313 450 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-233ENST00000489352 CXCL11O14625 94 aa14.84□□□□□ -0.03
HDAC6-233ENST00000489352 ITGA6P23229 1130 aa14.84□□□□□ -0.03
HDAC6-233ENST00000489352 INPP5BP32019 993 aa14.84□□□□□ -0.03
HDAC6-233ENST00000489352 GADL1Q6ZQY3 521 aa14.84□□□□□ -0.03
HDAC6-233ENST00000489352 PPM1EQ8WY54 764 aa14.84□□□□□ -0.03
HDAC6-233ENST00000489352 TAF5LO75529 589 aa14.83□□□□□ -0.04
HDAC6-233ENST00000489352 DDX58O95786 925 aaKnown RBP14.83□□□□□ -0.04
HDAC6-233ENST00000489352 CACNB3P54284 484 aa14.83□□□□□ -0.04
HDAC6-233ENST00000489352 SHHQ15465 462 aa14.83□□□□□ -0.04
HDAC6-233ENST00000489352 GPAT2Q6NUI2 795 aa14.83□□□□□ -0.04
HDAC6-233ENST00000489352 C15orf52Q6ZUT6 534 aaKnown RBP14.83□□□□□ -0.04
HDAC6-233ENST00000489352 ASB2Q96Q27 587 aa14.83□□□□□ -0.04
HDAC6-233ENST00000489352 MRPS5P82675 430 aaKnown RBP14.82□□□□□ -0.04
HDAC6-233ENST00000489352 MOGSQ13724 837 aa14.82□□□□□ -0.04
HDAC6-233ENST00000489352 FAM83AQ86UY5 434 aa14.82□□□□□ -0.04
HDAC6-233ENST00000489352 ALYREFQ86V81 257 aaKnown RBP14.82□□□□□ -0.04
HDAC6-233ENST00000489352 ANKRD13CQ8N6S4 541 aa14.82□□□□□ -0.04
HDAC6-233ENST00000489352 METTL22Q9BUU2 404 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-233ENST00000489352 PHAXQ9H814 394 aaKnown RBP14.82□□□□□ -0.04
HDAC6-233ENST00000489352 THEGQ9P2T0 379 aa14.82□□□□□ -0.04
HDAC6-233ENST00000489352 SNAP23O00161 211 aa14.81□□□□□ -0.04
HDAC6-233ENST00000489352 COL6A1P12109 1028 aa14.81□□□□□ -0.04
HDAC6-233ENST00000489352 USP38Q8NB14 1042 aa14.81□□□□□ -0.04
HDAC6-233ENST00000489352 NEXNQ0ZGT2 675 aa14.8□□□□□ -0.04
HDAC6-233ENST00000489352 TRIM32Q13049 653 aa14.8□□□□□ -0.04
HDAC6-233ENST00000489352 SLC45A1Q9Y2W3 748 aa14.8□□□□□ -0.04
HDAC6-233ENST00000489352 TCF20Q9UGU0 1960 aaKnown RBP14.8□□□□□ -0.04
HDAC6-233ENST00000489352 CHL1O00533 1208 aa14.79□□□□□ -0.04
HDAC6-233ENST00000489352 DUSP27Q5VZP5 1158 aa14.79□□□□□ -0.04
HDAC6-233ENST00000489352 TEKT1Q969V4 418 aa14.79□□□□□ -0.04
HDAC6-233ENST00000489352 SENP6Q9GZR1 1112 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-233ENST00000489352 MYO9BQ13459 2157 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 PLIN1O60240 522 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 PRKAR2AP13861 404 aaKnown RBP14.78□□□□□ -0.04
HDAC6-233ENST00000489352 PDE3AQ14432 1141 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 C9orf50Q5SZB4 431 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 FKBP1CQ5VVH2 108 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 GAS2L1Q99501 681 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-233ENST00000489352 PICK1Q9NRD5 415 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 PNMA3Q9UL41 463 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 ZHX2Q9Y6X8 837 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 LTBP2Q14767 1821 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 MAST2Q6P0Q8 1798 aa14.78□□□□□ -0.04
HDAC6-233ENST00000489352 ANKRD18BA2A2Z9 1011 aa14.77□□□□□ -0.05
HDAC6-233ENST00000489352 GRIN2CQ14957 1233 aa14.77□□□□□ -0.05
HDAC6-233ENST00000489352 FAM110CQ1W6H9 321 aa14.77□□□□□ -0.05
HDAC6-233ENST00000489352 UBE3BQ7Z3V4 1068 aa14.77□□□□□ -0.05
HDAC6-233ENST00000489352 MAP3K2Q9Y2U5 619 aa14.77□□□□□ -0.05
HDAC6-233ENST00000489352 MUC6Q6W4X9 2439 aa14.76□□□□□ -0.05
HDAC6-233ENST00000489352 A0A1B0GUL6 1792 aa14.76□□□□□ -0.05
HDAC6-233ENST00000489352 A0A0G2JLL6 359 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-233ENST00000489352 FRAT2O75474 233 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-233ENST00000489352 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-233ENST00000489352 HDLBPQ00341 1268 aaKnown RBP14.76□□□□□ -0.05
HDAC6-233ENST00000489352 NEUROD2Q15784 382 aa14.76□□□□□ -0.05
HDAC6-233ENST00000489352 NOL9Q5SY16 702 aaKnown RBP14.76□□□□□ -0.05
HDAC6-233ENST00000489352 PRRT2Q7Z6L0 340 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-233ENST00000489352 LRFN3Q9BTN0 628 aa14.76□□□□□ -0.05
HDAC6-233ENST00000489352 PRDM5Q9NQX1 630 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-233ENST00000489352 ZNF112Q9UJU3 913 aa14.76□□□□□ -0.05
HDAC6-233ENST00000489352 PTPRFP10586 1907 aa14.75□□□□□ -0.05
HDAC6-233ENST00000489352 CYP2B6P20813 491 aa14.75□□□□□ -0.05
HDAC6-233ENST00000489352 HIBADHP31937 336 aaKnown RBP14.75□□□□□ -0.05
HDAC6-233ENST00000489352 TRMT44Q8IYL2 757 aaKnown RBP14.75□□□□□ -0.05
HDAC6-233ENST00000489352 TRIB2Q92519 343 aa14.75□□□□□ -0.05
HDAC6-233ENST00000489352 TSPYL2Q9H2G4 693 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-233ENST00000489352 RPAP1Q9BWH6 1393 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-233ENST00000489352 TMPOP42166 694 aaKnown RBP14.74□□□□□ -0.05
HDAC6-233ENST00000489352 TMEM31Q5JXX7 168 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms