RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 BLOC1S2Q6QNY1 142 aa21.33■■□□□ 1.01
POLR2J3-205ENST00000489144 CLEC17AQ6ZS10 378 aa21.33■■□□□ 1.01
POLR2J3-205ENST00000489144 ZNF219Q9P2Y4 722 aaPredicted RBP21.33■■□□□ 1.01
POLR2J3-205ENST00000489144 FEZ2Q9UHY8 353 aaPredicted RBP21.33■■□□□ 1.01
POLR2J3-205ENST00000489144 ZFYP08048 801 aaPredicted RBP21.33■■□□□ 1
POLR2J3-205ENST00000489144 ZSCAN23Q3MJ62 389 aa21.33■■□□□ 1
POLR2J3-205ENST00000489144 PTMAP06454 111 aaKnown RBP21.32■■□□□ 1
POLR2J3-205ENST00000489144 CRY2Q49AN0 593 aa21.32■■□□□ 1
POLR2J3-205ENST00000489144 PIBF1Q8WXW3 757 aa21.32■■□□□ 1
POLR2J3-205ENST00000489144 MAP3K12Q12852 859 aa21.32■■□□□ 1
POLR2J3-205ENST00000489144 CCDC83Q8IWF9 413 aa21.32■■□□□ 1
POLR2J3-205ENST00000489144 NLGN1Q8N2Q7 840 aa21.32■■□□□ 1
POLR2J3-205ENST00000489144 AIDAQ96BJ3 306 aa21.32■■□□□ 1
POLR2J3-205ENST00000489144 INCENPQ9NQS7 918 aa21.32■■□□□ 1
POLR2J3-205ENST00000489144 LOC102724159A0A0B4J2E5 919 aa21.31■■□□□ 1
POLR2J3-205ENST00000489144 HIBADHP31937 336 aaKnown RBP21.31■■□□□ 1
POLR2J3-205ENST00000489144 PWP2Q15269 919 aaKnown RBP21.31■■□□□ 1
POLR2J3-205ENST00000489144 NKX2-3Q8TAU0 364 aa21.31■■□□□ 1
POLR2J3-205ENST00000489144 DSCC1Q9BVC3 393 aa21.31■■□□□ 1
POLR2J3-205ENST00000489144 TPCN1Q9ULQ1 816 aa21.31■■□□□ 1
POLR2J3-205ENST00000489144 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.31■■□□□ 1
POLR2J3-205ENST00000489144 RPS6KB1P23443 525 aa21.31■■□□□ 1
POLR2J3-205ENST00000489144 NOLC1Q14978 699 aaKnown RBP eCLIP21.31■■□□□ 1
POLR2J3-205ENST00000489144 LRRFIP1Q32MZ4 808 aaKnown RBP21.31■■□□□ 1
POLR2J3-205ENST00000489144 LCORLQ8N3X6 602 aa21.31■■□□□ 1
POLR2J3-205ENST00000489144 RBM17Q96I25 401 aaKnown RBP21.31■■□□□ 1
POLR2J3-205ENST00000489144 NEK1Q96PY6 1258 aa21.31■■□□□ 1
POLR2J3-205ENST00000489144 ANKRD2Q9GZV1 360 aa21.31■■□□□ 1
POLR2J3-205ENST00000489144 PPFIA3O75145 1194 aa21.3■■□□□ 1
POLR2J3-205ENST00000489144 UFL1O94874 794 aa21.3■■□□□ 1
POLR2J3-205ENST00000489144 SLC15A2Q16348 729 aa21.3■■□□□ 1
POLR2J3-205ENST00000489144 FOXD4L6Q3SYB3 417 aaPredicted RBP21.3■■□□□ 1
POLR2J3-205ENST00000489144 FOXD4L3Q6VB84 417 aaPredicted RBP21.3■■□□□ 1
POLR2J3-205ENST00000489144 PARP3Q9Y6F1 533 aa21.3■■□□□ 1
POLR2J3-205ENST00000489144 FBXO33Q7Z6M2 555 aa21.3■■□□□ 1
POLR2J3-205ENST00000489144 GNL3LQ9NVN8 582 aaKnown RBP21.3■■□□□ 1
POLR2J3-205ENST00000489144 E7EWF7 191 aa21.29■■□□□ 1
POLR2J3-205ENST00000489144 CYP7A1P22680 504 aa21.29■■□□□ 1
POLR2J3-205ENST00000489144 ME3Q16798 604 aa21.29■■□□□ 1
POLR2J3-205ENST00000489144 ZSCAN25Q6NSZ9 544 aa21.29■■□□□ 1
POLR2J3-205ENST00000489144 ZNF384Q8TF68 577 aa21.29■■□□□ 1
POLR2J3-205ENST00000489144 GPHNQ9NQX3 736 aaPredicted RBP21.29■■□□□ 1
POLR2J3-205ENST00000489144 LIMCH1Q9UPQ0 1083 aa21.29■■□□□ 1
POLR2J3-205ENST00000489144 PRDX5P30044 214 aa21.29■■□□□ 1
POLR2J3-205ENST00000489144 TOB2Q14106 344 aaPredicted RBP21.29■■□□□ 1
POLR2J3-205ENST00000489144 ILDR1Q86SU0 546 aaPredicted RBP21.29■■□□□ 1
POLR2J3-205ENST00000489144 PATL2C9JE40 543 aaKnown RBP21.28■■□□□ 1
POLR2J3-205ENST00000489144 SMIM22K7EJ46 135 aa21.28■■□□□ 1
POLR2J3-205ENST00000489144 PSMA5P28066 241 aa21.28■■□□□ 1
POLR2J3-205ENST00000489144 TNNT3P45378 269 aaPredicted RBP21.28■■□□□ 1
POLR2J3-205ENST00000489144 ST3GAL1Q11201 340 aa21.28■■□□□ 1
POLR2J3-205ENST00000489144 UBE3CQ15386 1083 aa21.28■■□□□ 1
POLR2J3-205ENST00000489144 ANKRD31Q8N7Z5 1873 aa21.28■■□□□ 1
POLR2J3-205ENST00000489144 DYNLL1P63167 89 aaKnown RBP21.28■■□□□ 1
POLR2J3-205ENST00000489144 TM6SF1Q9BZW5 370 aa21.28■■□□□ 1
POLR2J3-205ENST00000489144 RIMBP2O15034 1052 aa21.27■■□□□ 1
POLR2J3-205ENST00000489144 MCM2P49736 904 aa21.27■■□□□ 1
POLR2J3-205ENST00000489144 GRIK5Q16478 980 aa21.27■■□□□ 1
POLR2J3-205ENST00000489144 Q6ZUG5 572 aa21.27■■□□□ 1
POLR2J3-205ENST00000489144 SDR42E1Q8WUS8 393 aa21.27■■□□□ 1
POLR2J3-205ENST00000489144 STRBPQ96SI9 672 aaKnown RBP21.27■■□□□ 1
POLR2J3-205ENST00000489144 EPB41L4AQ9HCS5 686 aaPredicted RBP21.27■□□□□ 0.99
POLR2J3-205ENST00000489144 STK32BQ9NY57 414 aa21.27■□□□□ 0.99
POLR2J3-205ENST00000489144 POLLQ9UGP5 575 aa21.27■□□□□ 0.99
POLR2J3-205ENST00000489144 XDHP47989 1333 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 C6orf229H3BNL8 230 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 PRR29P0C7W0 189 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 CHRNA5P30532 468 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 CUL4AQ13619 759 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 SLC4A8Q2Y0W8 1093 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 CAVIN1Q6NZI2 390 aaKnown RBP21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 DDX41Q9UJV9 622 aaKnown RBP21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 CTIFO43310 598 aaKnown RBP21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 RAB11FIP4Q86YS3 637 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 NBPF3Q9H094 633 aa21.26■□□□□ 0.99
POLR2J3-205ENST00000489144 SF3B2Q13435 895 aaKnown RBP21.25■□□□□ 0.99
POLR2J3-205ENST00000489144 BRF1Q92994 677 aa21.25■□□□□ 0.99
POLR2J3-205ENST00000489144 ZDHHC9Q9Y397 364 aa21.25■□□□□ 0.99
POLR2J3-205ENST00000489144 MORC2Q9Y6X9 1032 aaPredicted RBP21.25■□□□□ 0.99
POLR2J3-205ENST00000489144 IRS2Q9Y4H2 1338 aa21.25■□□□□ 0.99
POLR2J3-205ENST00000489144 PPEF1O14829 653 aaPredicted RBP21.25■□□□□ 0.99
POLR2J3-205ENST00000489144 LAMA4Q16363 1823 aa21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 SRGNP10124 158 aa21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 CTDSPL2Q05D32 466 aa21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 TBC1D10CQ8IV04 446 aa21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 BRIP1Q9BX63 1249 aa21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 SLC4A4Q9Y6R1 1079 aa21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 DOCK2Q92608 1830 aa21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 BAG4O95429 457 aaKnown RBP21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 IMMTQ16891 758 aaKnown RBP21.24■□□□□ 0.99
POLR2J3-205ENST00000489144 EVX2Q03828 476 aa21.23■□□□□ 0.99
POLR2J3-205ENST00000489144 TSGA10IPQ3SY00 556 aa21.23■□□□□ 0.99
POLR2J3-205ENST00000489144 GRIPAP1Q4V328 841 aa21.23■□□□□ 0.99
POLR2J3-205ENST00000489144 SPTLC3Q9NUV7 552 aa21.23■□□□□ 0.99
POLR2J3-205ENST00000489144 GGA1Q9UJY5 639 aa21.23■□□□□ 0.99
POLR2J3-205ENST00000489144 ZNF213O14771 459 aa21.23■□□□□ 0.99
POLR2J3-205ENST00000489144 MECOMQ03112 1051 aa21.23■□□□□ 0.99
POLR2J3-205ENST00000489144 APOBRQ0VD83 1088 aa21.23■□□□□ 0.99
POLR2J3-205ENST00000489144 FLAD1Q8NFF5 587 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms