RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 PCDHGA11Q9Y5H2 935 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 TNS3Q68CZ2 1445 aa8.25□□□□□ -1.09
PDCD4-209ENST00000489049 GNB5O14775 395 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
PDCD4-209ENST00000489049 TATP17735 454 aaPredicted RBP8.24□□□□□ -1.09
PDCD4-209ENST00000489049 CD33P20138 364 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 RGS3P49796 1198 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 TEFQ10587 303 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 ZNF530Q6P9A1 599 aaPredicted RBP8.24□□□□□ -1.09
PDCD4-209ENST00000489049 RAPGEF4Q8WZA2 1011 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 ARID3AQ99856 593 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 SPG7Q9UQ90 795 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 PXDNLA1KZ92 1463 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 SPATA31A3Q5VYP0 1347 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 ALS2Q96Q42 1657 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 CAMTA1Q9Y6Y1 1673 aa8.24□□□□□ -1.09
PDCD4-209ENST00000489049 ELL2O00472 640 aaPredicted RBP8.23□□□□□ -1.09
PDCD4-209ENST00000489049 KHNYNO15037 678 aaKnown RBP8.23□□□□□ -1.09
PDCD4-209ENST00000489049 ADH6P28332 368 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 BAG6P46379 1132 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 EML3Q32P44 896 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 BMP2KLQ5H9B9 411 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 CHD1LQ86WJ1 897 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 ANKRD44Q8N8A2 993 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 LTV1Q96GA3 475 aaPredicted RBP8.23□□□□□ -1.09
PDCD4-209ENST00000489049 ZIC5Q96T25 663 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 DCTPP1Q9H773 170 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 AVENQ9NQS1 362 aaPredicted RBP8.23□□□□□ -1.09
PDCD4-209ENST00000489049 KLF15Q9UIH9 416 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 TNNQ9UQP3 1299 aa8.23□□□□□ -1.09
PDCD4-209ENST00000489049 FAM208AQ9UK61 1670 aaKnown RBP8.23□□□□□ -1.09
PDCD4-209ENST00000489049 K7ELQ4 463 aaPredicted RBP8.22□□□□□ -1.09
PDCD4-209ENST00000489049 FAM157BP0CG42 384 aa8.22□□□□□ -1.09
PDCD4-209ENST00000489049 BECN1Q14457 450 aa8.22□□□□□ -1.09
PDCD4-209ENST00000489049 CHSY3Q70JA7 882 aa8.22□□□□□ -1.09
PDCD4-209ENST00000489049 LMO7Q8WWI1 1683 aa8.21□□□□□ -1.09
PDCD4-209ENST00000489049 PXDNQ92626 1479 aa8.21□□□□□ -1.09
PDCD4-209ENST00000489049 RNMTO43148 476 aaKnown RBP8.21□□□□□ -1.1
PDCD4-209ENST00000489049 GNAI2P04899 355 aa8.21□□□□□ -1.1
PDCD4-209ENST00000489049 SKIP12755 728 aa8.21□□□□□ -1.1
PDCD4-209ENST00000489049 EIF4A1P60842 406 aaKnown RBP8.21□□□□□ -1.1
PDCD4-209ENST00000489049 SAMD5Q5TGI4 173 aa8.21□□□□□ -1.1
PDCD4-209ENST00000489049 FCHSD1Q86WN1 690 aa8.21□□□□□ -1.1
PDCD4-209ENST00000489049 SLAIN2Q9P270 581 aa8.21□□□□□ -1.1
PDCD4-209ENST00000489049 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
PDCD4-209ENST00000489049 GJA3Q9Y6H8 435 aa8.21□□□□□ -1.1
PDCD4-209ENST00000489049 RGS12O14924 1447 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 BTBD11A6QL63 1104 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 BACH1O14867 736 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 LZTS3O60299 673 aaPredicted RBP8.2□□□□□ -1.1
PDCD4-209ENST00000489049 GTF2IP78347 998 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 HDGFL1Q5TGJ6 251 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 ALG2Q9H553 416 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 HYPKQ9NX55 129 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 NOP53Q9NZM5 478 aaKnown RBP8.2□□□□□ -1.1
PDCD4-209ENST00000489049 SCHIP1Q9P0W5 487 aaPredicted RBP8.2□□□□□ -1.1
PDCD4-209ENST00000489049 USP35Q9P2H5 1018 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 DBF4Q9UBU7 674 aaPredicted RBP8.2□□□□□ -1.1
PDCD4-209ENST00000489049 PARP3Q9Y6F1 533 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 HEG1Q9ULI3 1381 aa8.2□□□□□ -1.1
PDCD4-209ENST00000489049 ADAMTS7Q9UKP4 1686 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 POM121CA8CG34 1229 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 DDX58O95786 925 aaKnown RBP8.19□□□□□ -1.1
PDCD4-209ENST00000489049 TXLNAP40222 546 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 FKBP5Q13451 457 aaPredicted RBP8.19□□□□□ -1.1
PDCD4-209ENST00000489049 ANKRD45Q5TZF3 282 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 ZNF468Q5VIY5 522 aaPredicted RBP8.19□□□□□ -1.1
PDCD4-209ENST00000489049 BICDL1Q6ZP65 573 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 BRINP3Q76B58 766 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 IFNL2Q8IZJ0 200 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 NFATC2IPQ8NCF5 419 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 ZNF358Q9NW07 568 aa8.19□□□□□ -1.1
PDCD4-209ENST00000489049 VIRMAQ69YN4 1812 aaKnown RBP8.18□□□□□ -1.1
PDCD4-209ENST00000489049 C1QTNF9BB2RNN3 333 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 EFSO43281 561 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 ALDH1L1O75891 902 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 PCBP4P57723 403 aaKnown RBP8.18□□□□□ -1.1
PDCD4-209ENST00000489049 XPCQ01831 940 aaPredicted RBP8.18□□□□□ -1.1
PDCD4-209ENST00000489049 LAMC2Q13753 1193 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 NCOA4Q13772 614 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 HSP90AB4PQ58FF6 505 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 CEP85Q6P2H3 762 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
PDCD4-209ENST00000489049 ZDHHC1Q8WTX9 485 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 TBC1D32Q96NH3 1257 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 SRCIN1Q9C0H9 1055 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 STRN4Q9NRL3 753 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 NLRP2Q9NX02 1062 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 MIS18AQ9NYP9 233 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 MARK1Q9P0L2 795 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 ATP10DQ9P241 1426 aa8.18□□□□□ -1.1
PDCD4-209ENST00000489049 STRCP1A6NGW2 1772 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 SRCAPQ6ZRS2 3230 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 ZBTB7CA1YPR0 619 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 RAB11FIP3O75154 756 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 FURINP09958 794 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 HSPA2P54652 639 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 EPHA4P54764 986 aa8.17□□□□□ -1.1
PDCD4-209ENST00000489049 ZC3H6P61129 1189 aaKnown RBP8.17□□□□□ -1.1
PDCD4-209ENST00000489049 ATP8B2P98198 1209 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms