RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 BCL9O00512 1426 aa14.74□□□□□ -0.05
CLIC4-202ENST00000488683 NPHP1O15259 732 aa14.74□□□□□ -0.05
CLIC4-202ENST00000488683 MBD4O95243 580 aa14.74□□□□□ -0.05
CLIC4-202ENST00000488683 PDE8BO95263 885 aa14.74□□□□□ -0.05
CLIC4-202ENST00000488683 METAP2P50579 478 aaKnown RBP eCLIP14.74□□□□□ -0.05
CLIC4-202ENST00000488683 LRRC8AQ8IWT6 810 aa14.74□□□□□ -0.05
CLIC4-202ENST00000488683 KCNJ14Q9UNX9 436 aa14.74□□□□□ -0.05
CLIC4-202ENST00000488683 CTAGE5O15320 804 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 ZNF202O95125 648 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 SMC2O95347 1197 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 ATP1A3P13637 1013 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 PFKFB1P16118 471 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 LMOD1P29536 600 aaPredicted RBP14.73□□□□□ -0.05
CLIC4-202ENST00000488683 EVX2Q03828 476 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 GRIN1Q05586 938 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 RASGRF1Q13972 1273 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 SLC4A8Q2Y0W8 1093 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 PPP4R3BQ5MIZ7 849 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 ADALQ6DHV7 355 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 ECM29Q5VYK3 1845 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 CCDC69A6NI79 296 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 PNOCQ13519 176 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 GNL2Q13823 731 aaKnown RBP14.73□□□□□ -0.05
CLIC4-202ENST00000488683 SUSD4Q5VX71 490 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 SYNE3Q6ZMZ3 975 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.73□□□□□ -0.05
CLIC4-202ENST00000488683 NBPF11Q86T75 865 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 AIDAQ96BJ3 306 aa14.73□□□□□ -0.05
CLIC4-202ENST00000488683 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLIC4-202ENST00000488683 NHSL1Q5SYE7 1610 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 IGSF3O75054 1194 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 SKILP12757 684 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 U2AF2P26368 475 aaKnown RBP eCLIP14.72□□□□□ -0.056e-7■□□□□ 11
CLIC4-202ENST00000488683 GTF2F1P35269 517 aaKnown RBP eCLIP14.72□□□□□ -0.052e-13■■■■■ 29.2
CLIC4-202ENST00000488683 TRDNQ13061 729 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 KRT40Q6A162 431 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 VPS37DQ86XT2 251 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 CCDC24Q8N4L8 307 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 SLC26A6Q9BXS9 759 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 IFNKQ9P0W0 207 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 ZSWIM5Q9P217 1185 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 ATRNO75882 1429 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 ANO1Q5XXA6 986 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 APOA5Q6Q788 366 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 TCRBV5S4A2TA0A5A2 114 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 DISP2A7MBM2 1401 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 CAVIN2O95810 425 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 AXDND1Q5T1B0 1012 aaPredicted RBP14.72□□□□□ -0.05
CLIC4-202ENST00000488683 SARM1Q6SZW1 724 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 SLC51AQ86UW1 340 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 LCORLQ8N3X6 602 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 XPO4Q9C0E2 1151 aaKnown RBP14.72□□□□□ -0.05
CLIC4-202ENST00000488683 KIAA1468Q9P260 1216 aa14.72□□□□□ -0.05
CLIC4-202ENST00000488683 ANGEL1Q9UNK9 670 aaKnown RBP14.72□□□□□ -0.05
CLIC4-202ENST00000488683 SH2B2O14492 632 aaPredicted RBP14.71□□□□□ -0.05
CLIC4-202ENST00000488683 ADAMTS2O95450 1211 aa14.71□□□□□ -0.05
CLIC4-202ENST00000488683 TMEM67Q5HYA8 995 aa14.71□□□□□ -0.05
CLIC4-202ENST00000488683 SDR42E1Q8WUS8 393 aa14.71□□□□□ -0.05
CLIC4-202ENST00000488683 ZNF512BQ96KM6 892 aaPredicted RBP14.71□□□□□ -0.05
CLIC4-202ENST00000488683 FAM217BQ9NTX9 383 aaPredicted RBP14.71□□□□□ -0.05
CLIC4-202ENST00000488683 POLR3EQ9NVU0 708 aa14.71□□□□□ -0.05
CLIC4-202ENST00000488683 BAZ2BQ9UIF8 2168 aaKnown RBP14.71□□□□□ -0.05
CLIC4-202ENST00000488683 CYP2D7A0A087X1C5 515 aa14.71□□□□□ -0.06
CLIC4-202ENST00000488683 DHX16O60231 1041 aaKnown RBP14.71□□□□□ -0.06
CLIC4-202ENST00000488683 PDE8AO60658 829 aa14.71□□□□□ -0.06
CLIC4-202ENST00000488683 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.06
CLIC4-202ENST00000488683 TMC6Q7Z403 805 aa14.71□□□□□ -0.06
CLIC4-202ENST00000488683 GRAMD1CQ8IYS0 662 aa14.71□□□□□ -0.06
CLIC4-202ENST00000488683 STRBPQ96SI9 672 aaKnown RBP14.71□□□□□ -0.06
CLIC4-202ENST00000488683 ANO10Q9NW15 660 aa14.71□□□□□ -0.06
CLIC4-202ENST00000488683 COL4A1P02462 1669 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 A0A1W2PQ27 194 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 A0A1W2PQ64 194 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 A0A1W2PQD8 194 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 CHAF1AQ13111 956 aaPredicted RBP14.7□□□□□ -0.06
CLIC4-202ENST00000488683 UBE3CQ15386 1083 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 SHC4Q6S5L8 630 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 ADGRA1Q86SQ6 560 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 CEP57L1Q8IYX8 460 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 SPATA5Q8NB90 893 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 DPF2Q92785 391 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 JAG2Q9Y219 1238 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 GOLGA8AA7E2F4 631 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 SLC3A2P08195 630 aaKnown RBP14.7□□□□□ -0.06
CLIC4-202ENST00000488683 FGFR2P21802 821 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 CDC25BP30305 580 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 CCZ1BP86790 482 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 CCZ1P86791 482 aaPredicted RBP14.7□□□□□ -0.06
CLIC4-202ENST00000488683 NUP133Q8WUM0 1156 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 LY9Q9HBG7 655 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 TAF1P21675 1872 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 ZMYM6O95789 1325 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 WDR19Q8NEZ3 1342 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 CHD4Q14839 1912 aa14.7□□□□□ -0.06
CLIC4-202ENST00000488683 LRP5O75197 1615 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 BTBD18B2RXH4 712 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 IFIT3O14879 490 aaKnown RBP14.69□□□□□ -0.06
CLIC4-202ENST00000488683 YEATS4O95619 227 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 TTF1Q15361 905 aaPredicted RBP14.69□□□□□ -0.06
CLIC4-202ENST00000488683 ZNF827Q17R98 1081 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms