RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 LGR6Q9HBX8 967 aa5.98□□□□□ -1.45
CD46-215ENST00000488596 AP4E1Q9UPM8 1137 aa5.98□□□□□ -1.45
CD46-215ENST00000488596 ICMTO60725 284 aa5.97□□□□□ -1.45
CD46-215ENST00000488596 CORO1BQ9BR76 489 aa5.97□□□□□ -1.45
CD46-215ENST00000488596 ZNF576Q9H609 170 aa5.97□□□□□ -1.45
CD46-215ENST00000488596 PPP1R9AQ9ULJ8 1098 aa5.97□□□□□ -1.45
CD46-215ENST00000488596 USTQ9Y2C2 406 aa5.97□□□□□ -1.45
CD46-215ENST00000488596 AOC2O75106 756 aa5.96□□□□□ -1.46
CD46-215ENST00000488596 ITPKAP23677 461 aa5.96□□□□□ -1.46
CD46-215ENST00000488596 CYP27A1Q02318 531 aa5.96□□□□□ -1.46
CD46-215ENST00000488596 PDE4CQ08493 712 aa5.96□□□□□ -1.46
CD46-215ENST00000488596 ORC1Q13415 861 aa5.96□□□□□ -1.46
CD46-215ENST00000488596 WFDC3Q8IUB2 231 aa5.96□□□□□ -1.46
CD46-215ENST00000488596 WDR18Q9BV38 432 aa5.96□□□□□ -1.46
CD46-215ENST00000488596 DAGLAQ9Y4D2 1042 aa5.96□□□□□ -1.46
CD46-215ENST00000488596 HP1BP3Q5SSJ5 553 aaPredicted RBP5.95□□□□□ -1.46
CD46-215ENST00000488596 OGFOD3Q6PK18 319 aa5.95□□□□□ -1.46
CD46-215ENST00000488596 ZNF574Q6ZN55 896 aaPredicted RBP5.95□□□□□ -1.46
CD46-215ENST00000488596 AGBL5Q8NDL9 886 aa5.95□□□□□ -1.46
CD46-215ENST00000488596 BCL7CQ8WUZ0 217 aaPredicted RBP5.95□□□□□ -1.46
CD46-215ENST00000488596 WDR89Q96FK6 387 aaPredicted RBP5.95□□□□□ -1.46
CD46-215ENST00000488596 EHD4Q9H223 541 aa5.95□□□□□ -1.46
CD46-215ENST00000488596 ZFYVE1Q9HBF4 777 aa5.95□□□□□ -1.46
CD46-215ENST00000488596 NPHS2Q9NP85 383 aa5.95□□□□□ -1.46
CD46-215ENST00000488596 BRPF3Q9ULD4 1205 aa5.95□□□□□ -1.46
CD46-215ENST00000488596 SERPINB4P48594 390 aa5.94□□□□□ -1.46
CD46-215ENST00000488596 PDE3AQ14432 1141 aa5.94□□□□□ -1.46
CD46-215ENST00000488596 SPRED2Q7Z698 418 aa5.94□□□□□ -1.46
CD46-215ENST00000488596 DDX54Q8TDD1 881 aaKnown RBP5.94□□□□□ -1.46
CD46-215ENST00000488596 EGFL7Q9UHF1 273 aa5.94□□□□□ -1.46
CD46-215ENST00000488596 DBX1A6NMT0 343 aa5.93□□□□□ -1.46
CD46-215ENST00000488596 H3BRB1 525 aa5.93□□□□□ -1.46
CD46-215ENST00000488596 LIG1P18858 919 aa5.93□□□□□ -1.46
CD46-215ENST00000488596 ZNF157P51786 506 aaPredicted RBP5.93□□□□□ -1.46
CD46-215ENST00000488596 ARHGAP4P98171 946 aa5.93□□□□□ -1.46
CD46-215ENST00000488596 BNIP3Q12983 259 aa5.93□□□□□ -1.46
CD46-215ENST00000488596 SPOCD1Q6ZMY3 1216 aa5.93□□□□□ -1.46
CD46-215ENST00000488596 ZC3H12CQ9C0D7 883 aaKnown RBP5.93□□□□□ -1.46
CD46-215ENST00000488596 TUT1Q9H6E5 874 aaKnown RBP5.93□□□□□ -1.46
CD46-215ENST00000488596 ABCB6Q9NP58 842 aa5.93□□□□□ -1.46
CD46-215ENST00000488596 TMPRSS2O15393 492 aa5.92□□□□□ -1.46
CD46-215ENST00000488596 CPNE3O75131 537 aaKnown RBP5.92□□□□□ -1.46
CD46-215ENST00000488596 PAPLNO95428 1278 aa5.92□□□□□ -1.46
CD46-215ENST00000488596 PTPN12Q05209 780 aaKnown RBP5.92□□□□□ -1.46
CD46-215ENST00000488596 FAAP100Q0VG06 881 aa5.92□□□□□ -1.46
CD46-215ENST00000488596 GLYCTKQ8IVS8 523 aa5.92□□□□□ -1.46
CD46-215ENST00000488596 FAM129BQ96TA1 746 aa5.92□□□□□ -1.46
CD46-215ENST00000488596 CCDC86Q9H6F5 360 aaKnown RBP5.92□□□□□ -1.46
CD46-215ENST00000488596 SLC5A6Q9Y289 635 aa5.92□□□□□ -1.46
CD46-215ENST00000488596 SYNGAP1Q96PV0 1343 aa5.92□□□□□ -1.46
CD46-215ENST00000488596 ZNF862O60290 1169 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 BRD1O95696 1058 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 IGHA2P01877 340 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 NEFLP07196 543 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 CDK5R2Q13319 367 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 ZNF792Q3KQV3 632 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 CCDC74AQ96AQ1 378 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 FANCD2OSQ96PS1 177 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 CRIM1Q9NZV1 1036 aa5.91□□□□□ -1.46
CD46-215ENST00000488596 TMEM238LA0A1B0GVL6 79 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 EIF1AYO14602 144 aaKnown RBP5.9□□□□□ -1.46
CD46-215ENST00000488596 NDUFB5O43674 189 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 FAM87AP0C7U9 286 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 AP3B2Q13367 1082 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 PLCL1Q15111 1095 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 CYP27C1Q4G0S4 372 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 PLD6Q8N2A8 252 aaKnown RBP5.9□□□□□ -1.46
CD46-215ENST00000488596 FAM181AQ8N9Y4 354 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 GLIS3Q8NEA6 775 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 CCER1Q8TC90 406 aaPredicted RBP5.9□□□□□ -1.46
CD46-215ENST00000488596 DISC1Q9NRI5 854 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 U3KQE9 123 aa5.9□□□□□ -1.46
CD46-215ENST00000488596 ZBTB7CA1YPR0 619 aa5.89□□□□□ -1.47
CD46-215ENST00000488596 GPR182O15218 404 aa5.89□□□□□ -1.47
CD46-215ENST00000488596 PDE3BQ13370 1112 aa5.89□□□□□ -1.47
CD46-215ENST00000488596 RPS26P11Q5JNZ5 115 aaPredicted RBP5.89□□□□□ -1.47
CD46-215ENST00000488596 PRPF40BQ6NWY9 871 aaKnown RBP5.89□□□□□ -1.47
CD46-215ENST00000488596 STK11IPQ8N1F8 1099 aa5.89□□□□□ -1.47
CD46-215ENST00000488596 NIF3L1Q9GZT8 377 aa5.89□□□□□ -1.47
CD46-215ENST00000488596 PCDHGC5Q9Y5F6 944 aa5.89□□□□□ -1.47
CD46-215ENST00000488596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.89□□□□□ -1.47
CD46-215ENST00000488596 CARMIL2Q6F5E8 1435 aa5.89□□□□□ -1.47
CD46-215ENST00000488596 GADD45BO75293 160 aaPredicted RBP5.88□□□□□ -1.47
CD46-215ENST00000488596 SLFN14P0C7P3 912 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 CD8BP10966 210 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 CD96P40200 585 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 ID3Q02535 119 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 GRM2Q14416 872 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 TTLL4Q14679 1199 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 KIF4BQ2VIQ3 1234 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 SMYD4Q8IYR2 804 aaPredicted RBP5.88□□□□□ -1.47
CD46-215ENST00000488596 NETO1Q8TDF5 533 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 EPS8L3Q8TE67 593 aaKnown RBP5.88□□□□□ -1.47
CD46-215ENST00000488596 GZF1Q9H116 711 aaPredicted RBP5.88□□□□□ -1.47
CD46-215ENST00000488596 DNAJC25Q9H1X3 360 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 ATXN3LQ9H3M9 355 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 PIDD1Q9HB75 910 aa5.88□□□□□ -1.47
CD46-215ENST00000488596 LEFTY1O75610 366 aa5.87□□□□□ -1.47
CD46-215ENST00000488596 GSTP1P09211 210 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms