RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 A0A1W2PP55 124 aa7.53□□□□□ -1.2
UBR3-211ENST00000487689 CYP27A1Q02318 531 aa7.53□□□□□ -1.2
UBR3-211ENST00000487689 POU4F3Q15319 338 aa7.53□□□□□ -1.2
UBR3-211ENST00000487689 WFDC3Q8IUB2 231 aa7.53□□□□□ -1.2
UBR3-211ENST00000487689 CCNJLQ8IV13 435 aa7.53□□□□□ -1.2
UBR3-211ENST00000487689 FAM168AQ92567 244 aa7.53□□□□□ -1.2
UBR3-211ENST00000487689 METTL12A8MUP2 240 aa7.52□□□□□ -1.21
UBR3-211ENST00000487689 NFICP08651 508 aa7.52□□□□□ -1.21
UBR3-211ENST00000487689 SERPINB4P48594 390 aa7.52□□□□□ -1.21
UBR3-211ENST00000487689 GADD45BO75293 160 aaPredicted RBP7.51□□□□□ -1.21
UBR3-211ENST00000487689 RAB6AP20340 208 aa7.51□□□□□ -1.21
UBR3-211ENST00000487689 MAP7Q14244 749 aa7.51□□□□□ -1.21
UBR3-211ENST00000487689 ATG4DQ86TL0 474 aaPredicted RBP7.51□□□□□ -1.21
UBR3-211ENST00000487689 STK11IPQ8N1F8 1099 aa7.51□□□□□ -1.21
UBR3-211ENST00000487689 SLC38A3Q99624 504 aa7.51□□□□□ -1.21
UBR3-211ENST00000487689 PPP4R2Q9NY27 417 aa7.51□□□□□ -1.21
UBR3-211ENST00000487689 ACTL7BQ9Y614 415 aa7.51□□□□□ -1.21
UBR3-211ENST00000487689 ZNF865P0CJ78 1059 aaPredicted RBP7.5□□□□□ -1.21
UBR3-211ENST00000487689 ADH5P11766 374 aa7.5□□□□□ -1.21
UBR3-211ENST00000487689 MAOBP27338 520 aa7.5□□□□□ -1.21
UBR3-211ENST00000487689 BNIP3Q12983 259 aa7.5□□□□□ -1.21
UBR3-211ENST00000487689 KIAA0319Q5VV43 1072 aa7.5□□□□□ -1.21
UBR3-211ENST00000487689 RC3H2Q9HBD1 1191 aaKnown RBP7.5□□□□□ -1.21
UBR3-211ENST00000487689 TRAK1Q9UPV9 953 aa7.5□□□□□ -1.21
UBR3-211ENST00000487689 PDE3AQ14432 1141 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 SPRED3Q2MJR0 410 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 AKAP4Q5JQC9 854 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 LCE5AQ5TCM9 118 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 DYMQ7RTS9 669 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 GLIS3Q8NEA6 775 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 TMEM40Q8WWA1 233 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 DNAJC25Q9H1X3 360 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 SEMA6CQ9H3T2 930 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 AP4E1Q9UPM8 1137 aa7.49□□□□□ -1.21
UBR3-211ENST00000487689 GRIA4P48058 902 aa7.48□□□□□ -1.21
UBR3-211ENST00000487689 AP3B2Q13367 1082 aa7.48□□□□□ -1.21
UBR3-211ENST00000487689 DMRTB1Q96MA1 342 aa7.48□□□□□ -1.21
UBR3-211ENST00000487689 TCF12Q99081 682 aa7.48□□□□□ -1.21
UBR3-211ENST00000487689 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
UBR3-211ENST00000487689 B3GALT4O96024 378 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 RNASE1P07998 156 aaKnown RBP7.46□□□□□ -1.22
UBR3-211ENST00000487689 FUT4P22083 530 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 ASPAP45381 313 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 ORC1Q13415 861 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 ZNF423Q2M1K9 1284 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 USPL1Q5W0Q7 1092 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 MISP3Q96FF7 219 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 NIF3L1Q9GZT8 377 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 MBNL3Q9NUK0 354 aaKnown RBP7.46□□□□□ -1.22
UBR3-211ENST00000487689 NLRP2Q9NX02 1062 aa7.46□□□□□ -1.22
UBR3-211ENST00000487689 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.45□□□□□ -1.22
UBR3-211ENST00000487689 EIF1AYO14602 144 aaKnown RBP7.45□□□□□ -1.22
UBR3-211ENST00000487689 CD8BP10966 210 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 ARHGAP4P98171 946 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 PTPN12Q05209 780 aaKnown RBP7.45□□□□□ -1.22
UBR3-211ENST00000487689 MESP2Q0VG99 397 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 OGFOD3Q6PK18 319 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 CCDC74AQ96AQ1 378 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 FAM84AQ96KN4 292 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 FAM129BQ96TA1 746 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 ZNF576Q9H609 170 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 ACSS3Q9H6R3 686 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 C1GALT1Q9NS00 363 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 FAM105AQ9NUU6 356 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 BIN2Q9UBW5 565 aaPredicted RBP7.45□□□□□ -1.22
UBR3-211ENST00000487689 ADAMTS6Q9UKP5 1117 aa7.45□□□□□ -1.22
UBR3-211ENST00000487689 DYNC1LI2O43237 492 aaPredicted RBP7.44□□□□□ -1.22
UBR3-211ENST00000487689 SLFN14P0C7P3 912 aa7.44□□□□□ -1.22
UBR3-211ENST00000487689 ITPKAP23677 461 aa7.44□□□□□ -1.22
UBR3-211ENST00000487689 PPP2R3AQ06190 1150 aa7.44□□□□□ -1.22
UBR3-211ENST00000487689 RPS26P11Q5JNZ5 115 aaPredicted RBP7.44□□□□□ -1.22
UBR3-211ENST00000487689 SEZ6L2Q6UXD5 910 aa7.44□□□□□ -1.22
UBR3-211ENST00000487689 LRRN4CLQ8ND94 238 aa7.44□□□□□ -1.22
UBR3-211ENST00000487689 NRSN2Q9GZP1 204 aa7.44□□□□□ -1.22
UBR3-211ENST00000487689 PIDD1Q9HB75 910 aa7.44□□□□□ -1.22
UBR3-211ENST00000487689 DTHD1Q6ZMT9 781 aa7.43□□□□□ -1.22
UBR3-211ENST00000487689 CILP2Q8IUL8 1156 aa7.43□□□□□ -1.22
UBR3-211ENST00000487689 RETREG2Q8NC44 543 aa7.43□□□□□ -1.22
UBR3-211ENST00000487689 LGR6Q9HBX8 967 aa7.43□□□□□ -1.22
UBR3-211ENST00000487689 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
UBR3-211ENST00000487689 CTSBP07858 339 aa7.42□□□□□ -1.22
UBR3-211ENST00000487689 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
UBR3-211ENST00000487689 LILRA6Q6PI73 481 aa7.42□□□□□ -1.22
UBR3-211ENST00000487689 TXNDC2Q86VQ3 553 aa7.42□□□□□ -1.22
UBR3-211ENST00000487689 PLD6Q8N2A8 252 aaKnown RBP7.42□□□□□ -1.22
UBR3-211ENST00000487689 PI4K2BQ8TCG2 481 aa7.42□□□□□ -1.22
UBR3-211ENST00000487689 CSRNP1Q96S65 589 aa7.42□□□□□ -1.22
UBR3-211ENST00000487689 DAGLAQ9Y4D2 1042 aa7.42□□□□□ -1.22
UBR3-211ENST00000487689 AOC2O75106 756 aa7.41□□□□□ -1.22
UBR3-211ENST00000487689 BHLHE22Q8NFJ8 381 aaPredicted RBP7.41□□□□□ -1.22
UBR3-211ENST00000487689 NETO1Q8TDF5 533 aa7.41□□□□□ -1.22
UBR3-211ENST00000487689 GPN3Q9UHW5 284 aaPredicted RBP7.41□□□□□ -1.22
UBR3-211ENST00000487689 NCANO14594 1321 aa7.41□□□□□ -1.22
UBR3-211ENST00000487689 LRRC10BA6NIK2 292 aa7.4□□□□□ -1.22
UBR3-211ENST00000487689 SUPT5HO00267 1087 aaKnown RBP7.4□□□□□ -1.22
UBR3-211ENST00000487689 XRCC5P13010 732 aaKnown RBP7.4□□□□□ -1.22
UBR3-211ENST00000487689 CFPP27918 469 aa7.4□□□□□ -1.22
UBR3-211ENST00000487689 CD96P40200 585 aa7.4□□□□□ -1.22
UBR3-211ENST00000487689 CYP27C1Q4G0S4 372 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms