RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 ADGRA1Q86SQ6 560 aa15.43■□□□□ 0.06
PRDM2-208ENST00000487453 MIGA1Q8NAN2 632 aa15.43■□□□□ 0.06
PRDM2-208ENST00000487453 ZC3H15Q8WU90 426 aaKnown RBP15.43■□□□□ 0.06
PRDM2-208ENST00000487453 ZBED3Q96IU2 234 aaPredicted RBP15.43■□□□□ 0.06
PRDM2-208ENST00000487453 MRIQ9BWK5 157 aa15.43■□□□□ 0.06
PRDM2-208ENST00000487453 TOMM70O94826 608 aa15.42■□□□□ 0.06
PRDM2-208ENST00000487453 GSPT1P15170 499 aaKnown RBP15.42■□□□□ 0.06
PRDM2-208ENST00000487453 CACNB3P54284 484 aa15.42■□□□□ 0.06
PRDM2-208ENST00000487453 APOBEC3HQ6NTF7 200 aaKnown RBP15.42■□□□□ 0.06
PRDM2-208ENST00000487453 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
PRDM2-208ENST00000487453 AATFQ9NY61 560 aaKnown RBP eCLIP15.42■□□□□ 0.06
PRDM2-208ENST00000487453 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
PRDM2-208ENST00000487453 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
PRDM2-208ENST00000487453 BAG3O95817 575 aa15.41■□□□□ 0.06
PRDM2-208ENST00000487453 CHGBP05060 677 aa15.41■□□□□ 0.06
PRDM2-208ENST00000487453 SPDYE2Q495Y8 402 aa15.41■□□□□ 0.06
PRDM2-208ENST00000487453 SLFNL1Q499Z3 407 aa15.41■□□□□ 0.06
PRDM2-208ENST00000487453 TMED8Q6PL24 325 aaPredicted RBP15.41■□□□□ 0.06
PRDM2-208ENST00000487453 APOBEC3FQ8IUX4 373 aaKnown RBP15.41■□□□□ 0.06
PRDM2-208ENST00000487453 SULF1Q8IWU6 871 aa15.41■□□□□ 0.06
PRDM2-208ENST00000487453 SMC1BQ8NDV3 1235 aa15.41■□□□□ 0.06
PRDM2-208ENST00000487453 FAM163AQ96GL9 167 aaPredicted RBP15.41■□□□□ 0.06
PRDM2-208ENST00000487453 USP40Q9NVE5 1235 aa15.41■□□□□ 0.06
PRDM2-208ENST00000487453 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
PRDM2-208ENST00000487453 FOCADQ5VW36 1801 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 RFX7Q2KHR2 1363 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 GPR75-ASB3A0A0A6YYF3 556 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 TCRBV5S4A2TA0A5A2 114 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 TCP10L2B9ZVM9 353 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 ADM5C9JUS6 153 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 ZFYP08048 801 aaPredicted RBP15.4■□□□□ 0.06
PRDM2-208ENST00000487453 CDC42EP5Q6NZY7 148 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 KRT26Q7Z3Y9 468 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 RBM46Q8TBY0 533 aaKnown RBP15.4■□□□□ 0.06
PRDM2-208ENST00000487453 GLIS2Q9BZE0 524 aaPredicted RBP15.4■□□□□ 0.06
PRDM2-208ENST00000487453 NAV1Q8NEY1 1877 aa15.4■□□□□ 0.06
PRDM2-208ENST00000487453 MAGEB6P1A0A0J9YX57 407 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 RNF113AO15541 343 aaKnown RBP15.39■□□□□ 0.05
PRDM2-208ENST00000487453 PLCG2P16885 1265 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 SDSP20132 328 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 TNNI2P48788 182 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
PRDM2-208ENST00000487453 PICALMQ13492 652 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 TNFAIP1Q13829 316 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 UBE3CQ15386 1083 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 CDC37L1Q7L3B6 337 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 SH3RF3Q8TEJ3 882 aaPredicted RBP15.39■□□□□ 0.05
PRDM2-208ENST00000487453 PGAP2Q9UHJ9 254 aa15.39■□□□□ 0.05
PRDM2-208ENST00000487453 MBD4O95243 580 aa15.38■□□□□ 0.05
PRDM2-208ENST00000487453 USP48Q86UV5 1035 aa15.38■□□□□ 0.05
PRDM2-208ENST00000487453 TEX11Q8IYF3 940 aa15.38■□□□□ 0.05
PRDM2-208ENST00000487453 APPBP2Q92624 585 aa15.38■□□□□ 0.05
PRDM2-208ENST00000487453 AIDAQ96BJ3 306 aa15.38■□□□□ 0.05
PRDM2-208ENST00000487453 TRAF5O00463 557 aa15.37■□□□□ 0.05
PRDM2-208ENST00000487453 RHBDL3P58872 404 aa15.37■□□□□ 0.05
PRDM2-208ENST00000487453 TCP10Q12799 353 aa15.37■□□□□ 0.05
PRDM2-208ENST00000487453 CERS3Q8IU89 383 aa15.37■□□□□ 0.05
PRDM2-208ENST00000487453 LCORLQ8N3X6 602 aa15.37■□□□□ 0.05
PRDM2-208ENST00000487453 ARMT1Q9H993 441 aa15.37■□□□□ 0.05
PRDM2-208ENST00000487453 DIAPH3Q9NSV4 1193 aa15.37■□□□□ 0.05
PRDM2-208ENST00000487453 DDX60LQ5H9U9 1706 aaKnown RBP15.37■□□□□ 0.05
PRDM2-208ENST00000487453 USP5P45974 858 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 PPP4CP60510 307 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 FSTL1Q12841 308 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 NFIAQ12857 509 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 RASA3Q14644 834 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 RIOK1Q9BRS2 568 aaKnown RBP15.36■□□□□ 0.05
PRDM2-208ENST00000487453 CRNKL1Q9BZJ0 848 aaKnown RBP15.36■□□□□ 0.05
PRDM2-208ENST00000487453 PUS7LQ9H0K6 701 aaKnown RBP15.36■□□□□ 0.05
PRDM2-208ENST00000487453 DEFB129Q9H1M3 183 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 ZNF408Q9H9D4 720 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 PPP2R3BQ9Y5P8 575 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 POLR2AP24928 1970 aaKnown RBP15.36■□□□□ 0.05
PRDM2-208ENST00000487453 CNTNAP1P78357 1384 aa15.36■□□□□ 0.05
PRDM2-208ENST00000487453 M0R2C6 588 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 HIP1O00291 1037 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 WDHD1O75717 1129 aaPredicted RBP15.35■□□□□ 0.05
PRDM2-208ENST00000487453 NMIQ13287 307 aaPredicted RBP15.35■□□□□ 0.05
PRDM2-208ENST00000487453 BMP2KLQ5H9B9 411 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 ZMYM1Q5SVZ6 1142 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 PRAMEF18Q5VWM3 479 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 DLK2Q6UY11 383 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 TGFBRAP1Q8WUH2 860 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 OSBP2Q969R2 916 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 CDCA5Q96FF9 252 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 SEC62Q99442 399 aaKnown RBP15.35■□□□□ 0.05
PRDM2-208ENST00000487453 TMEM39BQ9GZU3 492 aa15.35■□□□□ 0.05
PRDM2-208ENST00000487453 TRPM7Q96QT4 1865 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 A0A0D9SFI3 127 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 GPAA1O43292 621 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 FMR1Q06787 632 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRDM2-208ENST00000487453 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 FAM83AQ86UY5 434 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 MAPKAPK5Q8IW41 473 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 ZSCAN29Q8IWY8 852 aaPredicted RBP15.34■□□□□ 0.05
PRDM2-208ENST00000487453 FAM227BQ96M60 508 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 IDI2Q9BXS1 227 aa15.34■□□□□ 0.05
PRDM2-208ENST00000487453 DDX4Q9NQI0 724 aaKnown RBP15.34■□□□□ 0.05
PRDM2-208ENST00000487453 FAM198AQ9UFP1 575 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms