RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 SLC15A2Q16348 729 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 TXNRD1Q16881 649 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 TMEM164Q5U3C3 297 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 PRIMPOLQ96LW4 560 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 PDGFDQ9GZP0 370 aaPredicted RBP7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 MTFR1LQ9H019 292 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 SUV39H2Q9H5I1 410 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 MARK1Q9P0L2 795 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 AKAP12Q02952 1782 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 TNS2Q63HR2 1409 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 MYOM1P52179 1685 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 USP54Q70EL1 1684 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 TTC21BQ7Z4L5 1316 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 EVC2Q86UK5 1308 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 PAPPAQ13219 1627 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 PRMT3O60678 531 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 FURINP09958 794 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 LAMC2Q13753 1193 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 OCLNQ16625 522 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 RTN1Q16799 776 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 BTBD6Q96KE9 485 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 SYT17Q9BSW7 474 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 AVENQ9NQS1 362 aaPredicted RBP7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 ANKIB1Q9P2G1 1089 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 NHSQ6T4R5 1651 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 USP31Q70CQ4 1352 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 SBNO2Q9Y2G9 1366 aa7.31□□□□□ -1.24
R3HDM1-218ENST00000487294 EXOC5O00471 708 aa7.3□□□□□ -1.24
R3HDM1-218ENST00000487294 SFSWAPQ12872 951 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-218ENST00000487294 FKBP5Q13451 457 aaPredicted RBP7.3□□□□□ -1.24
R3HDM1-218ENST00000487294 STK32BQ9NY57 414 aa7.3□□□□□ -1.24
R3HDM1-218ENST00000487294 KLF15Q9UIH9 416 aa7.3□□□□□ -1.24
R3HDM1-218ENST00000487294 BCS1LQ9Y276 419 aa7.3□□□□□ -1.24
R3HDM1-218ENST00000487294 COL24A1Q17RW2 1714 aa7.3□□□□□ -1.24
R3HDM1-218ENST00000487294 CHD4Q14839 1912 aa7.29□□□□□ -1.24
R3HDM1-218ENST00000487294 ZBTB7AO95365 584 aa7.29□□□□□ -1.24
R3HDM1-218ENST00000487294 ADH6P28332 368 aa7.29□□□□□ -1.24
R3HDM1-218ENST00000487294 TYRO3Q06418 890 aa7.29□□□□□ -1.24
R3HDM1-218ENST00000487294 Q8N3U1 123 aa7.29□□□□□ -1.24
R3HDM1-218ENST00000487294 CEP63Q96MT8 703 aa7.29□□□□□ -1.24
R3HDM1-218ENST00000487294 BRD7Q9NPI1 651 aa7.29□□□□□ -1.24
R3HDM1-218ENST00000487294 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 QSER1Q2KHR3 1735 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 MON2Q7Z3U7 1717 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 NEURL1BA8MQ27 555 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 C1QTNF9BB2RNN3 333 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 BTLAQ7Z6A9 289 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 CD163Q86VB7 1156 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 KLK14Q9P0G3 267 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 TIMELESSQ9UNS1 1208 aa7.28□□□□□ -1.24
R3HDM1-218ENST00000487294 HIF1AQ16665 826 aa7.27□□□□□ -1.25
R3HDM1-218ENST00000487294 CHSY3Q70JA7 882 aa7.27□□□□□ -1.25
R3HDM1-218ENST00000487294 ERICH6Q7L0X2 663 aa7.27□□□□□ -1.25
R3HDM1-218ENST00000487294 CLP1Q92989 425 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-218ENST00000487294 VTI1AQ96AJ9 217 aa7.27□□□□□ -1.25
R3HDM1-218ENST00000487294 SLC30A3Q99726 388 aa7.27□□□□□ -1.25
R3HDM1-218ENST00000487294 DMGDHQ9UI17 866 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-218ENST00000487294 LRFN2Q9ULH4 789 aa7.27□□□□□ -1.25
R3HDM1-218ENST00000487294 CD163L1Q9NR16 1453 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 KTN1Q86UP2 1357 aaKnown RBP7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 TGFBR3LH3BV60 316 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 IL2RBP14784 551 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 CHRNA4P43681 627 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 KCNQ4P56696 695 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 PCBP4P57723 403 aaKnown RBP7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 C1QTNF8P60827 252 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 DGKZQ13574 1117 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 ZNF468Q5VIY5 522 aaPredicted RBP7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 IER5Q5VY09 327 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 FCHSD1Q86WN1 690 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 MYO19Q96H55 970 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 PUS7Q96PZ0 661 aaKnown RBP7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 PRR12Q9ULL5 1215 aa7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 GOLGB1Q14789 3259 aaKnown RBP7.26□□□□□ -1.25
R3HDM1-218ENST00000487294 BTAF1O14981 1849 aa7.25□□□□□ -1.25
R3HDM1-218ENST00000487294 ZBTB7CA1YPR0 619 aa7.25□□□□□ -1.25
R3HDM1-218ENST00000487294 C11orf91Q3C1V1 193 aa7.25□□□□□ -1.25
R3HDM1-218ENST00000487294 CAPN12Q6ZSI9 719 aa7.25□□□□□ -1.25
R3HDM1-218ENST00000487294 KCNH4Q9UQ05 1017 aa7.25□□□□□ -1.25
R3HDM1-218ENST00000487294 SPEM2Q0P670 501 aa7.24□□□□□ -1.25
R3HDM1-218ENST00000487294 ZNF827Q17R98 1081 aa7.24□□□□□ -1.25
R3HDM1-218ENST00000487294 COX20Q5RI15 118 aa7.24□□□□□ -1.25
R3HDM1-218ENST00000487294 SYT9Q86SS6 491 aa7.24□□□□□ -1.25
R3HDM1-218ENST00000487294 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.24□□□□□ -1.252e-7■■■■■ 93.2
R3HDM1-218ENST00000487294 FAM208AQ9UK61 1670 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-218ENST00000487294 EDC4Q6P2E9 1401 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-218ENST00000487294 LTN1O94822 1766 aa7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 ROCK2O75116 1388 aaKnown RBP7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 GRNP28799 593 aaKnown RBP7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 RAB44Q7Z6P3 723 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 IP6K1Q92551 441 aa7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 COL26A1Q96A83 441 aa7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 SAP130Q9H0E3 1048 aa7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 NLRP2Q9NX02 1062 aa7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 LY75O60449 1722 aa7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 PNPLA7Q6ZV29 1317 aa7.23□□□□□ -1.25
R3HDM1-218ENST00000487294 ANKRD36BQ8N2N9 1353 aa7.22□□□□□ -1.25
R3HDM1-218ENST00000487294 CEP350Q5VT06 3117 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms