RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 POLR3EQ9NVU0 708 aa30.38■■■□□ 2.45
HLA-C-208ENST00000487245 ME1P48163 572 aa30.37■■■□□ 2.45
HLA-C-208ENST00000487245 FMR1NBQ8N0W7 255 aaPredicted RBP30.37■■■□□ 2.45
HLA-C-208ENST00000487245 PCDHA7Q9UN72 937 aa30.37■■■□□ 2.45
HLA-C-208ENST00000487245 GOLGA6L19H0YKK7 550 aa30.36■■■□□ 2.45
HLA-C-208ENST00000487245 C11orf57Q6ZUT1 292 aaPredicted RBP30.36■■■□□ 2.45
HLA-C-208ENST00000487245 IFNL3Q8IZI9 196 aa30.36■■■□□ 2.45
HLA-C-208ENST00000487245 KCNG4Q8TDN1 519 aa30.36■■■□□ 2.45
HLA-C-208ENST00000487245 CNNM2Q9H8M5 875 aa30.36■■■□□ 2.45
HLA-C-208ENST00000487245 PRKCSHP14314 528 aaPredicted RBP30.36■■■□□ 2.45
HLA-C-208ENST00000487245 CYB5R4Q7L1T6 521 aa30.36■■■□□ 2.45
HLA-C-208ENST00000487245 DRC7Q8IY82 874 aa30.36■■■□□ 2.45
HLA-C-208ENST00000487245 LINC00301Q8NCQ3 95 aa30.36■■■□□ 2.45
HLA-C-208ENST00000487245 NAPBQ9H115 298 aa30.36■■■□□ 2.45
HLA-C-208ENST00000487245 NUTM2BA6NNL0 878 aaPredicted RBP30.35■■■□□ 2.45
HLA-C-208ENST00000487245 NUTM2EB1AL46 878 aaPredicted RBP30.35■■■□□ 2.45
HLA-C-208ENST00000487245 NUTM2AQ8IVF1 878 aaPredicted RBP30.35■■■□□ 2.45
HLA-C-208ENST00000487245 PNPLA7Q6ZV29 1317 aa30.35■■■□□ 2.45
HLA-C-208ENST00000487245 BCORQ6W2J9 1755 aa30.34■■■□□ 2.45
HLA-C-208ENST00000487245 MBD4O95243 580 aa30.34■■■□□ 2.45
HLA-C-208ENST00000487245 METAP2P50579 478 aaKnown RBP eCLIP30.34■■■□□ 2.45
HLA-C-208ENST00000487245 NACAP1Q9BZK3 213 aa30.34■■■□□ 2.45
HLA-C-208ENST00000487245 COL5A3P25940 1745 aaPredicted RBP30.34■■■□□ 2.45
HLA-C-208ENST00000487245 CHRNDQ07001 517 aa30.33■■■□□ 2.45
HLA-C-208ENST00000487245 CLIP2Q9UDT6 1046 aa30.33■■■□□ 2.45
HLA-C-208ENST00000487245 SGMS1Q86VZ5 419 aa30.33■■■□□ 2.45
HLA-C-208ENST00000487245 KRT23Q9C075 422 aa30.33■■■□□ 2.45
HLA-C-208ENST00000487245 B4E1Z4 1266 aa30.32■■■□□ 2.44
HLA-C-208ENST00000487245 LIFRP42702 1097 aa30.32■■■□□ 2.44
HLA-C-208ENST00000487245 BCAMP50895 628 aa30.32■■■□□ 2.44
HLA-C-208ENST00000487245 CHAF1AQ13111 956 aaPredicted RBP30.32■■■□□ 2.44
HLA-C-208ENST00000487245 IGDCC4Q8TDY8 1250 aa30.32■■■□□ 2.44
HLA-C-208ENST00000487245 NEMFO60524 1076 aa30.31■■■□□ 2.44
HLA-C-208ENST00000487245 SF3B3Q15393 1217 aaKnown RBP30.31■■■□□ 2.44
HLA-C-208ENST00000487245 NRBP1Q9UHY1 535 aa30.31■■■□□ 2.44
HLA-C-208ENST00000487245 PPFIA3O75145 1194 aa30.31■■■□□ 2.44
HLA-C-208ENST00000487245 STK38Q15208 465 aa30.31■■■□□ 2.44
HLA-C-208ENST00000487245 MYSM1Q5VVJ2 828 aa30.31■■■□□ 2.44
HLA-C-208ENST00000487245 APOA5Q6Q788 366 aa30.31■■■□□ 2.44
HLA-C-208ENST00000487245 DHX40Q8IX18 779 aaKnown RBP30.31■■■□□ 2.44
HLA-C-208ENST00000487245 MTA3Q9BTC8 594 aa30.31■■■□□ 2.44
HLA-C-208ENST00000487245 EPB41L4AQ9HCS5 686 aaPredicted RBP30.31■■■□□ 2.44
HLA-C-208ENST00000487245 GNL3LQ9NVN8 582 aaKnown RBP30.31■■■□□ 2.44
HLA-C-208ENST00000487245 CEP57L1Q8IYX8 460 aa30.3■■■□□ 2.44
HLA-C-208ENST00000487245 NAT10Q9H0A0 1025 aaKnown RBP30.3■■■□□ 2.44
HLA-C-208ENST00000487245 ARMT1Q9H993 441 aa30.3■■■□□ 2.44
HLA-C-208ENST00000487245 GSG1L2A8MUP6 293 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 SNAP23O00161 211 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 ZBTB43O43298 467 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 AKNAD1Q5T1N1 836 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 SYNE3Q6ZMZ3 975 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 ANKRD18AQ8IVF6 992 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 TIAM2Q8IVF5 1701 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 NEDD4P46934 1319 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 TMEM67Q5HYA8 995 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 BPIFA3Q9BQP9 254 aa30.29■■■□□ 2.44
HLA-C-208ENST00000487245 SPTLC2O15270 562 aa30.28■■■□□ 2.44
HLA-C-208ENST00000487245 KIF23Q02241 960 aaPredicted RBP30.28■■■□□ 2.44
HLA-C-208ENST00000487245 UBE4AQ14139 1066 aa30.28■■■□□ 2.44
HLA-C-208ENST00000487245 SF3A1Q15459 793 aaKnown RBP30.28■■■□□ 2.44
HLA-C-208ENST00000487245 OTUD7BQ6GQQ9 843 aa30.28■■■□□ 2.44
HLA-C-208ENST00000487245 NFXL1Q6ZNB6 911 aa30.28■■■□□ 2.44
HLA-C-208ENST00000487245 LY9Q9HBG7 655 aa30.28■■■□□ 2.44
HLA-C-208ENST00000487245 LRP2BPQ9P2M1 347 aa30.28■■■□□ 2.44
HLA-C-208ENST00000487245 CLIC4Q9Y696 253 aa30.28■■■□□ 2.44
HLA-C-208ENST00000487245 BECN2A8MW95 431 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 KCNQ2O43526 872 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 MFSD6Q6ZSS7 791 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 ECM29Q5VYK3 1845 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 CNTNAP4Q9C0A0 1308 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 LRMPQ12912 555 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 RAB11FIP4Q86YS3 637 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 CACTINQ8WUQ7 758 aaKnown RBP30.27■■■□□ 2.44
HLA-C-208ENST00000487245 STAG1Q8WVM7 1258 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 ALG1Q9BT22 464 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 DENND2AQ9ULE3 1009 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 SLC4A4Q9Y6R1 1079 aa30.27■■■□□ 2.44
HLA-C-208ENST00000487245 ZNF804BA4D1E1 1349 aa30.26■■■□□ 2.44
HLA-C-208ENST00000487245 CCDC144BQ3MJ40 725 aa30.26■■■□□ 2.43
HLA-C-208ENST00000487245 CCDC144CPQ8IYA2 1237 aa30.26■■■□□ 2.43
HLA-C-208ENST00000487245 BSDC1Q9NW68 430 aaPredicted RBP30.26■■■□□ 2.43
HLA-C-208ENST00000487245 BCL9LQ86UU0 1499 aa30.26■■■□□ 2.43
HLA-C-208ENST00000487245 CHD4Q14839 1912 aa30.26■■■□□ 2.43
HLA-C-208ENST00000487245 IFIT3O14879 490 aaKnown RBP30.25■■■□□ 2.43
HLA-C-208ENST00000487245 TOM1O60784 492 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 TDO2P48775 406 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 SLC10A5Q5PT55 438 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 LINC00116Q8NCU8 138 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 RNF41Q9H4P4 317 aaPredicted RBP30.25■■■□□ 2.43
HLA-C-208ENST00000487245 ZSWIM5Q9P217 1185 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 GOLGA8AA7E2F4 631 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 POLR3DP05423 398 aaPredicted RBP30.25■■■□□ 2.43
HLA-C-208ENST00000487245 NDUFA8P51970 172 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 SART3Q15020 963 aaKnown RBP30.25■■■□□ 2.43
HLA-C-208ENST00000487245 ERFEQ4G0M1 354 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 ANO1Q5XXA6 986 aa30.25■■■□□ 2.43
HLA-C-208ENST00000487245 STK36Q9NRP7 1315 aa30.24■■■□□ 2.43
HLA-C-208ENST00000487245 NID2Q14112 1375 aa30.24■■■□□ 2.43
HLA-C-208ENST00000487245 CCDC69A6NI79 296 aa30.24■■■□□ 2.43
HLA-C-208ENST00000487245 IARSP41252 1262 aaKnown RBP30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms