RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ARGLU1Q9NWB6 273 aaPredicted RBP14.07□□□□□ -0.16
COL3A1-206ENST00000487010 MYH7P12883 1935 aa14.07□□□□□ -0.16
COL3A1-206ENST00000487010 FANCGO15287 622 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 TOP1P11387 765 aaKnown RBP14.06□□□□□ -0.16
COL3A1-206ENST00000487010 ZAP70P43403 619 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 PLA2G4AP47712 749 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 HSP90AB3PQ58FF7 597 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 KRT40Q6A162 431 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 OLFM4Q6UX06 510 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 PROSER2Q86WR7 435 aaPredicted RBP14.06□□□□□ -0.16
COL3A1-206ENST00000487010 MNS1Q8NEH6 495 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 TMEM232C9JQI7 657 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 GPAA1O43292 621 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 ZSCAN12O43309 604 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 TADA3O75528 432 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 CDKL5O76039 1030 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 URI1O94763 535 aaPredicted RBP14.06□□□□□ -0.16
COL3A1-206ENST00000487010 A1BGP04217 495 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 CCDC57Q2TAC2 916 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 NBPF3Q9H094 633 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 ZBTB3Q9H5J0 574 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 FANCLQ9NW38 375 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 ANGEL1Q9UNK9 670 aaKnown RBP14.06□□□□□ -0.16
COL3A1-206ENST00000487010 ABCC12Q96J65 1359 aa14.06□□□□□ -0.16
COL3A1-206ENST00000487010 EFCAB8A8MWE9 144 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 TPM1P09493 284 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 METAP2P50579 478 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL3A1-206ENST00000487010 TRDNQ13061 729 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 TMCO3Q6UWJ1 677 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 METTL16Q86W50 562 aaKnown RBP14.05□□□□□ -0.16
COL3A1-206ENST00000487010 TMEM139Q8IV31 216 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.05□□□□□ -0.16
COL3A1-206ENST00000487010 PARP3Q9Y6F1 533 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 PARP4Q9UKK3 1724 aaKnown RBP14.05□□□□□ -0.16
COL3A1-206ENST00000487010 VWA3AA6NCI4 1184 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 ARHGAP6O43182 974 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 CUTAO60888 179 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 GOLGA8FQ08AF8 430 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 GOLGA8DPQ0D2H9 430 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 GNL2Q13823 731 aaKnown RBP14.05□□□□□ -0.16
COL3A1-206ENST00000487010 LONRF3Q496Y0 759 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 CCDC102BQ68D86 513 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 KRBA2Q6ZNG9 492 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 FOXP4Q8IVH2 680 aaPredicted RBP14.05□□□□□ -0.16
COL3A1-206ENST00000487010 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 CARD6Q9BX69 1037 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 C19orf44Q9H6X5 657 aa14.05□□□□□ -0.16
COL3A1-206ENST00000487010 ECM29Q5VYK3 1845 aa14.04□□□□□ -0.16
COL3A1-206ENST00000487010 SH2B2O14492 632 aaPredicted RBP14.04□□□□□ -0.16
COL3A1-206ENST00000487010 CYB5R4Q7L1T6 521 aa14.04□□□□□ -0.16
COL3A1-206ENST00000487010 MPHOSPH8Q99549 860 aa14.04□□□□□ -0.16
COL3A1-206ENST00000487010 INTS13Q9NVM9 706 aa14.04□□□□□ -0.16
COL3A1-206ENST00000487010 DENND2AQ9ULE3 1009 aa14.04□□□□□ -0.16
COL3A1-206ENST00000487010 PPP2R2CQ9Y2T4 447 aa14.04□□□□□ -0.16
COL3A1-206ENST00000487010 PCDHA5Q9Y5H7 936 aa14.04□□□□□ -0.16
COL3A1-206ENST00000487010 ADAMTSL3P82987 1691 aa14.04□□□□□ -0.16
COL3A1-206ENST00000487010 CDC27P30260 824 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 CYP2C19P33261 490 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 TBX2Q13207 712 aaPredicted RBP14.03□□□□□ -0.16
COL3A1-206ENST00000487010 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 CPLX2Q6PUV4 134 aaKnown RBP14.03□□□□□ -0.16
COL3A1-206ENST00000487010 CNNM3Q8NE01 707 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 NKX2-3Q8TAU0 364 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 KCNH3Q9ULD8 1083 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 UBR2Q8IWV8 1755 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 ERICH4A6NGS2 130 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 ATP8B1O43520 1251 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 MDM2Q00987 491 aaPredicted RBP14.03□□□□□ -0.16
COL3A1-206ENST00000487010 PDE4BQ07343 736 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 PTPN21Q16825 1174 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 PI16Q6UXB8 463 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 TBC1D10CQ8IV04 446 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 ELOA2Q8IYF1 753 aaPredicted RBP14.03□□□□□ -0.16
COL3A1-206ENST00000487010 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 DDX17Q92841 729 aaKnown RBP14.03□□□□□ -0.16
COL3A1-206ENST00000487010 PHKBQ93100 1093 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 ISCA1Q9BUE6 129 aa14.03□□□□□ -0.16
COL3A1-206ENST00000487010 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL3A1-206ENST00000487010 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL3A1-206ENST00000487010 GOLGA6L9A6NEM1 432 aa14.02□□□□□ -0.16
COL3A1-206ENST00000487010 RXRAP19793 462 aa14.02□□□□□ -0.16
COL3A1-206ENST00000487010 BMP6P22004 513 aa14.02□□□□□ -0.16
COL3A1-206ENST00000487010 BAG1Q99933 345 aaPredicted RBP14.02□□□□□ -0.16
COL3A1-206ENST00000487010 CASQ1P31415 396 aa14.02□□□□□ -0.17
COL3A1-206ENST00000487010 ADD2P35612 726 aa14.02□□□□□ -0.17
COL3A1-206ENST00000487010 MAP3K9P80192 1104 aa14.02□□□□□ -0.17
COL3A1-206ENST00000487010 TRIM29Q14134 588 aa14.02□□□□□ -0.17
COL3A1-206ENST00000487010 NTRK3Q16288 839 aa14.02□□□□□ -0.17
COL3A1-206ENST00000487010 SENP2Q9HC62 589 aa14.02□□□□□ -0.17
COL3A1-206ENST00000487010 CALCOCO1Q9P1Z2 691 aa14.02□□□□□ -0.17
COL3A1-206ENST00000487010 AKAP11Q9UKA4 1901 aa14.01□□□□□ -0.17
COL3A1-206ENST00000487010 ZBTB43O43298 467 aa14.01□□□□□ -0.17
COL3A1-206ENST00000487010 STX10O60499 249 aa14.01□□□□□ -0.17
COL3A1-206ENST00000487010 RANBP6O60518 1105 aaKnown RBP14.01□□□□□ -0.17
COL3A1-206ENST00000487010 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
COL3A1-206ENST00000487010 FAM177A1Q8N128 213 aaPredicted RBP14.01□□□□□ -0.17
COL3A1-206ENST00000487010 IGDCC4Q8TDY8 1250 aa14.01□□□□□ -0.17
COL3A1-206ENST00000487010 TMEM87BQ96K49 555 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms