RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 HPS5Q9UPZ3 1129 aa23.88■■□□□ 1.41
HPS3-206ENST00000486530 WTIPA6NIX2 430 aaPredicted RBP23.87■■□□□ 1.41
HPS3-206ENST00000486530 SERPINB2P05120 415 aa23.87■■□□□ 1.41
HPS3-206ENST00000486530 TDO2P48775 406 aa23.87■■□□□ 1.41
HPS3-206ENST00000486530 TFCP2L1Q9NZI6 479 aa23.87■■□□□ 1.41
HPS3-206ENST00000486530 B4E1Z4 1266 aa23.87■■□□□ 1.41
HPS3-206ENST00000486530 SPATA32Q96LK8 384 aa23.87■■□□□ 1.41
HPS3-206ENST00000486530 TSPY26PQ9H489 355 aa23.87■■□□□ 1.41
HPS3-206ENST00000486530 CCDC88AQ3V6T2 1871 aa23.86■■□□□ 1.41
HPS3-206ENST00000486530 CCDC173Q0VFZ6 552 aa23.86■■□□□ 1.41
HPS3-206ENST00000486530 MIGA1Q8NAN2 632 aa23.86■■□□□ 1.41
HPS3-206ENST00000486530 KRT23Q9C075 422 aa23.86■■□□□ 1.41
HPS3-206ENST00000486530 MAGEB6P1A0A0J9YX57 407 aa23.85■■□□□ 1.41
HPS3-206ENST00000486530 ZBTB22O15209 634 aa23.85■■□□□ 1.41
HPS3-206ENST00000486530 PRKAB2O43741 272 aa23.85■■□□□ 1.41
HPS3-206ENST00000486530 DDR1Q08345 913 aa23.85■■□□□ 1.41
HPS3-206ENST00000486530 AKNAD1Q5T1N1 836 aa23.85■■□□□ 1.41
HPS3-206ENST00000486530 LEO1Q8WVC0 666 aaPredicted RBP23.85■■□□□ 1.41
HPS3-206ENST00000486530 CFAP45Q9UL16 551 aa23.85■■□□□ 1.41
HPS3-206ENST00000486530 CPLX1O14810 134 aa23.85■■□□□ 1.41
HPS3-206ENST00000486530 COL23A1Q86Y22 540 aaPredicted RBP23.85■■□□□ 1.41
HPS3-206ENST00000486530 STAG1Q8WVM7 1258 aa23.85■■□□□ 1.41
HPS3-206ENST00000486530 FDPSP14324 419 aaKnown RBP23.84■■□□□ 1.41
HPS3-206ENST00000486530 HIBADHP31937 336 aaKnown RBP23.84■■□□□ 1.41
HPS3-206ENST00000486530 ADGRA1Q86SQ6 560 aa23.84■■□□□ 1.41
HPS3-206ENST00000486530 KIAA1551Q9HCM1 1747 aa23.84■■□□□ 1.41
HPS3-206ENST00000486530 POLRMTO00411 1230 aaKnown RBP23.83■■□□□ 1.41
HPS3-206ENST00000486530 KLRK1P26718 216 aa23.83■■□□□ 1.41
HPS3-206ENST00000486530 CTDSPL2Q05D32 466 aa23.83■■□□□ 1.41
HPS3-206ENST00000486530 GRAPQ13588 217 aa23.83■■□□□ 1.41
HPS3-206ENST00000486530 MFSD6Q6ZSS7 791 aa23.83■■□□□ 1.41
HPS3-206ENST00000486530 SGMS1Q86VZ5 419 aa23.83■■□□□ 1.41
HPS3-206ENST00000486530 GRAPLQ8TC17 118 aaPredicted RBP23.83■■□□□ 1.41
HPS3-206ENST00000486530 ATL3Q6DD88 541 aa23.83■■□□□ 1.4
HPS3-206ENST00000486530 RGS22Q8NE09 1264 aa23.83■■□□□ 1.4
HPS3-206ENST00000486530 NKX2-3Q8TAU0 364 aa23.83■■□□□ 1.4
HPS3-206ENST00000486530 IGDCC4Q8TDY8 1250 aa23.83■■□□□ 1.4
HPS3-206ENST00000486530 TFIP11Q9UBB9 837 aaKnown RBP23.83■■□□□ 1.4
HPS3-206ENST00000486530 LIFRP42702 1097 aa23.82■■□□□ 1.4
HPS3-206ENST00000486530 TPRNQ4KMQ1 711 aa23.82■■□□□ 1.4
HPS3-206ENST00000486530 TMED8Q6PL24 325 aaPredicted RBP23.82■■□□□ 1.4
HPS3-206ENST00000486530 PPP1R9BQ96SB3 815 aa23.82■■□□□ 1.4
HPS3-206ENST00000486530 RIOK1Q9BRS2 568 aaKnown RBP23.82■■□□□ 1.4
HPS3-206ENST00000486530 RNF41Q9H4P4 317 aaPredicted RBP23.82■■□□□ 1.4
HPS3-206ENST00000486530 ECM29Q5VYK3 1845 aa23.82■■□□□ 1.4
HPS3-206ENST00000486530 GOLGA6L4A6NEF3 574 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 METAP2P50579 478 aaKnown RBP eCLIP23.81■■□□□ 1.4
HPS3-206ENST00000486530 FOSBP53539 338 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 ST5P78524 1137 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 CRY2Q49AN0 593 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 TMEM67Q5HYA8 995 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 APOA5Q6Q788 366 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 MTA3Q9BTC8 594 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 LY9Q9HBG7 655 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 ORC3Q9UBD5 711 aaPredicted RBP23.81■■□□□ 1.4
HPS3-206ENST00000486530 TNS1Q9HBL0 1735 aaKnown RBP23.81■■□□□ 1.4
HPS3-206ENST00000486530 KDM4AO75164 1064 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 CDKL5O76039 1030 aa23.81■■□□□ 1.4
HPS3-206ENST00000486530 IRS2Q9Y4H2 1338 aa23.8■■□□□ 1.4
HPS3-206ENST00000486530 FAM43AQ8N2R8 423 aa23.8■■□□□ 1.4
HPS3-206ENST00000486530 C8orf76Q96K31 380 aa23.8■■□□□ 1.4
HPS3-206ENST00000486530 ZSWIM5Q9P217 1185 aa23.8■■□□□ 1.4
HPS3-206ENST00000486530 BAZ2AQ9UIF9 1905 aaKnown RBP23.8■■□□□ 1.4
HPS3-206ENST00000486530 PPARAQ07869 468 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 CPLX2Q6PUV4 134 aaKnown RBP23.79■■□□□ 1.4
HPS3-206ENST00000486530 RAB11FIP4Q86YS3 637 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 FLAD1Q8NFF5 587 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 ZNF396Q96N95 335 aaPredicted RBP23.79■■□□□ 1.4
HPS3-206ENST00000486530 ANAPC4Q9UJX5 808 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 TACC3Q9Y6A5 838 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 LAMB1P07942 1786 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 ZBTB43O43298 467 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 ADD1P35611 737 aaKnown RBP23.79■■□□□ 1.4
HPS3-206ENST00000486530 NFXL1Q6ZNB6 911 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 NLGN1Q8N2Q7 840 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 NSUN4Q96CB9 384 aaKnown RBP23.79■■□□□ 1.4
HPS3-206ENST00000486530 BRIP1Q9BX63 1249 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 INCENPQ9NQS7 918 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 LEMD3Q9Y2U8 911 aa23.79■■□□□ 1.4
HPS3-206ENST00000486530 NID2Q14112 1375 aa23.78■■□□□ 1.4
HPS3-206ENST00000486530 IFIT3O14879 490 aaKnown RBP23.78■■□□□ 1.4
HPS3-206ENST00000486530 PPFIA3O75145 1194 aa23.78■■□□□ 1.4
HPS3-206ENST00000486530 SART3Q15020 963 aaKnown RBP23.78■■□□□ 1.4
HPS3-206ENST00000486530 SDR42E1Q8WUS8 393 aa23.78■■□□□ 1.4
HPS3-206ENST00000486530 KLRG2A4D1S0 409 aaPredicted RBP23.77■■□□□ 1.4
HPS3-206ENST00000486530 ZNF384Q8TF68 577 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 DUOX1Q9NRD9 1551 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 IGSF3O75054 1194 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 GUCY1B3Q02153 619 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 GIMAP6Q6P9H5 292 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 MICU3Q86XE3 530 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 FBXO18Q8NFZ0 1043 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 RPGRQ92834 1020 aaKnown RBP23.77■■□□□ 1.4
HPS3-206ENST00000486530 TRIM44Q96DX7 344 aaPredicted RBP23.77■■□□□ 1.4
HPS3-206ENST00000486530 SENP2Q9HC62 589 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 ANKIB1Q9P2G1 1089 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 XDHP47989 1333 aa23.77■■□□□ 1.4
HPS3-206ENST00000486530 CCDC69A6NI79 296 aa23.76■■□□□ 1.39
HPS3-206ENST00000486530 RRP12Q5JTH9 1297 aaKnown RBP23.76■■□□□ 1.39
HPS3-206ENST00000486530 TOMM22Q9NS69 142 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms