RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 FAM170BA6NMN3 283 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 AOC2O75106 756 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 PRNPP04156 253 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 AKAP4Q5JQC9 854 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 HP1BP3Q5SSJ5 553 aaPredicted RBP8.03□□□□□ -1.12
GCFC2-209ENST00000486016 LCE4AQ5TA78 99 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 CBLL1Q75N03 491 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 GIMAP7Q8NHV1 300 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 CCER1Q8TC90 406 aaPredicted RBP8.03□□□□□ -1.12
GCFC2-209ENST00000486016 EPS8L3Q8TE67 593 aaKnown RBP8.03□□□□□ -1.12
GCFC2-209ENST00000486016 DMRTB1Q96MA1 342 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 CORO1BQ9BR76 489 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 WDR18Q9BV38 432 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 OSBPL1AQ9BXW6 950 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 PPP1R9AQ9ULJ8 1098 aa8.03□□□□□ -1.12
GCFC2-209ENST00000486016 GNEQ9Y223 722 aaKnown RBP8.03□□□□□ -1.12
GCFC2-209ENST00000486016 DYMQ7RTS9 669 aa8.02□□□□□ -1.13
GCFC2-209ENST00000486016 DDX54Q8TDD1 881 aaKnown RBP8.02□□□□□ -1.13
GCFC2-209ENST00000486016 METTL22Q9BUU2 404 aaPredicted RBP8.02□□□□□ -1.13
GCFC2-209ENST00000486016 YIPF2Q9BWQ6 316 aa8.02□□□□□ -1.13
GCFC2-209ENST00000486016 C1GALT1Q9NS00 363 aa8.02□□□□□ -1.13
GCFC2-209ENST00000486016 DYNC1LI2O43237 492 aaPredicted RBP8.01□□□□□ -1.13
GCFC2-209ENST00000486016 PDE4CQ08493 712 aa8.01□□□□□ -1.13
GCFC2-209ENST00000486016 AP3B2Q13367 1082 aa8.01□□□□□ -1.13
GCFC2-209ENST00000486016 MAP7Q14244 749 aa8.01□□□□□ -1.13
GCFC2-209ENST00000486016 TMC7Q7Z402 723 aa8.01□□□□□ -1.13
GCFC2-209ENST00000486016 WDR89Q96FK6 387 aaPredicted RBP8.01□□□□□ -1.13
GCFC2-209ENST00000486016 FBXL18Q96ME1 805 aa8.01□□□□□ -1.13
GCFC2-209ENST00000486016 TBC1D32Q96NH3 1257 aa8.01□□□□□ -1.13
GCFC2-209ENST00000486016 CCDC39Q9UFE4 941 aa8.01□□□□□ -1.13
GCFC2-209ENST00000486016 GADD45BO75293 160 aaPredicted RBP8□□□□□ -1.13
GCFC2-209ENST00000486016 DSC3Q14574 896 aa8□□□□□ -1.13
GCFC2-209ENST00000486016 CCDC86Q9H6F5 360 aaKnown RBP8□□□□□ -1.13
GCFC2-209ENST00000486016 TRAK1Q9UPV9 953 aa8□□□□□ -1.13
GCFC2-209ENST00000486016 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
GCFC2-209ENST00000486016 JUNBP17275 347 aaPredicted RBP7.99□□□□□ -1.13
GCFC2-209ENST00000486016 ITGB5P18084 799 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 RAB6AP20340 208 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 ASPAP45381 313 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 PI16Q6UXB8 463 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 PDZD3Q86UT5 571 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 VSIG10LQ86VR7 867 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 TP53INP2Q8IXH6 220 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 TMC1Q8TDI8 760 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 RAD18Q9NS91 495 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 CRIM1Q9NZV1 1036 aa7.99□□□□□ -1.13
GCFC2-209ENST00000486016 TMPRSS2O15393 492 aa7.98□□□□□ -1.13
GCFC2-209ENST00000486016 CYP26A1O43174 497 aa7.98□□□□□ -1.13
GCFC2-209ENST00000486016 ZNF862O60290 1169 aa7.98□□□□□ -1.13
GCFC2-209ENST00000486016 ZNF157P51786 506 aaPredicted RBP7.98□□□□□ -1.13
GCFC2-209ENST00000486016 COL19A1Q14993 1142 aa7.98□□□□□ -1.13
GCFC2-209ENST00000486016 ZNF765Q7L2R6 523 aa7.98□□□□□ -1.13
GCFC2-209ENST00000486016 AP4E1Q9UPM8 1137 aa7.98□□□□□ -1.13
GCFC2-209ENST00000486016 LIG1P18858 919 aa7.97□□□□□ -1.13
GCFC2-209ENST00000486016 PDE3AQ14432 1141 aa7.97□□□□□ -1.13
GCFC2-209ENST00000486016 KIF4BQ2VIQ3 1234 aa7.97□□□□□ -1.13
GCFC2-209ENST00000486016 OGFOD3Q6PK18 319 aa7.96□□□□□ -1.14
GCFC2-209ENST00000486016 STK35Q8TDR2 534 aa7.96□□□□□ -1.14
GCFC2-209ENST00000486016 KRT82Q9NSB4 513 aa7.96□□□□□ -1.14
GCFC2-209ENST00000486016 BSDC1Q9NW68 430 aaPredicted RBP7.96□□□□□ -1.14
GCFC2-209ENST00000486016 ZC3H7BQ9UGR2 993 aaKnown RBP7.96□□□□□ -1.14
GCFC2-209ENST00000486016 DCTN4Q9UJW0 460 aa7.96□□□□□ -1.14
GCFC2-209ENST00000486016 BRD1O95696 1058 aa7.95□□□□□ -1.14
GCFC2-209ENST00000486016 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
GCFC2-209ENST00000486016 ERICH6Q7L0X2 663 aa7.95□□□□□ -1.14
GCFC2-209ENST00000486016 FANCD2OSQ96PS1 177 aa7.95□□□□□ -1.14
GCFC2-209ENST00000486016 BCO2Q9BYV7 579 aa7.95□□□□□ -1.14
GCFC2-209ENST00000486016 DISC1Q9NRI5 854 aa7.95□□□□□ -1.14
GCFC2-209ENST00000486016 TREHO43280 583 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 FCGRTP55899 365 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 CYP27A1Q02318 531 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 ENOX2Q16206 610 aaKnown RBP7.94□□□□□ -1.14
GCFC2-209ENST00000486016 DUSP27Q5VZP5 1158 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 DTHD1Q6ZMT9 781 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 WFDC3Q8IUB2 231 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 C3orf58Q8NDZ4 430 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 KRTAP4-11Q9BYQ6 195 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 ZC3H12CQ9C0D7 883 aaKnown RBP7.94□□□□□ -1.14
GCFC2-209ENST00000486016 TMEM39AQ9NV64 488 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 CACNA2D2Q9NY47 1150 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 DAGLAQ9Y4D2 1042 aa7.94□□□□□ -1.14
GCFC2-209ENST00000486016 XRCC5P13010 732 aaKnown RBP7.93□□□□□ -1.14
GCFC2-209ENST00000486016 ID3Q02535 119 aa7.93□□□□□ -1.14
GCFC2-209ENST00000486016 PAK6Q9NQU5 681 aaPredicted RBP7.93□□□□□ -1.14
GCFC2-209ENST00000486016 NLRP2Q9NX02 1062 aa7.93□□□□□ -1.14
GCFC2-209ENST00000486016 SLFN14P0C7P3 912 aa7.92□□□□□ -1.14
GCFC2-209ENST00000486016 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.92□□□□□ -1.14
GCFC2-209ENST00000486016 ZNF648Q5T619 568 aaPredicted RBP7.92□□□□□ -1.14
GCFC2-209ENST00000486016 NXPE4Q6UWF7 544 aa7.92□□□□□ -1.14
GCFC2-209ENST00000486016 AGBL5Q8NDL9 886 aa7.92□□□□□ -1.14
GCFC2-209ENST00000486016 ATXN3LQ9H3M9 355 aa7.92□□□□□ -1.14
GCFC2-209ENST00000486016 LGR6Q9HBX8 967 aa7.92□□□□□ -1.14
GCFC2-209ENST00000486016 PLCB3Q01970 1234 aa7.91□□□□□ -1.14
GCFC2-209ENST00000486016 ZNF252P-AS1Q0IIN9 211 aa7.91□□□□□ -1.14
GCFC2-209ENST00000486016 ZNF124Q15973 351 aa7.91□□□□□ -1.14
GCFC2-209ENST00000486016 FBLN7Q53RD9 439 aa7.91□□□□□ -1.14
GCFC2-209ENST00000486016 BIN2Q9UBW5 565 aaPredicted RBP7.91□□□□□ -1.14
GCFC2-209ENST00000486016 PNMA6FA0A0J9YX94 578 aa7.9□□□□□ -1.14
GCFC2-209ENST00000486016 ARNTP27540 789 aa7.9□□□□□ -1.14
GCFC2-209ENST00000486016 PPP2R3AQ06190 1150 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms