RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 FAM95CA0A1B0GW59 222 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 PRR19A6NJB7 356 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 ENC1O14682 589 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 GIPC1O14908 333 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 PAGE1O75459 146 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 TGFB1P01137 390 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 NFICP08651 508 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 ARNTP27540 789 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 NFKBIBQ15653 356 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 HP1BP3Q5SSJ5 553 aaPredicted RBP7.25□□□□□ -1.25
VPS41-213ENST00000485955 SULF2Q8IWU5 870 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 SHKBP1Q8TBC3 707 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 EZH1Q92800 747 aaPredicted RBP7.25□□□□□ -1.25
VPS41-213ENST00000485955 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
VPS41-213ENST00000485955 C12orf49Q9H741 205 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 AP4E1Q9UPM8 1137 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 SPG7Q9UQ90 795 aa7.25□□□□□ -1.25
VPS41-213ENST00000485955 BMP6P22004 513 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 NME2P22392 152 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 SSTR4P31391 388 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 ADMP35318 185 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 ASPAP45381 313 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 LRP8Q14114 963 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 GRIN3AQ8TCU5 1115 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 KCNB2Q92953 911 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 SEMA6CQ9H3T2 930 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 ZFP64Q9NPA5 681 aa7.24□□□□□ -1.25
VPS41-213ENST00000485955 WDR64B1ANS9 1081 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 TMPRSS2O15393 492 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 PRPF40AO75400 957 aaKnown RBP7.23□□□□□ -1.25
VPS41-213ENST00000485955 USP17L7P0C7H9 530 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 RAB6AP20340 208 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 ZNF252P-AS1Q0IIN9 211 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 RASIP1Q5U651 963 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 NPAS4Q8IUM7 802 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 FBXL6Q8N531 539 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 DUSP9Q99956 384 aaKnown RBP7.23□□□□□ -1.25
VPS41-213ENST00000485955 ACSS3Q9H6R3 686 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 CRIM1Q9NZV1 1036 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 FAM8A1Q9UBU6 413 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 PCDHGC5Q9Y5F6 944 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 SYNGAP1Q96PV0 1343 aa7.23□□□□□ -1.25
VPS41-213ENST00000485955 DYNC1LI2O43237 492 aaPredicted RBP7.22□□□□□ -1.25
VPS41-213ENST00000485955 F13BP05160 661 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 COL19A1Q14993 1142 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 KIF4BQ2VIQ3 1234 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 EAPPQ56P03 285 aaPredicted RBP7.22□□□□□ -1.25
VPS41-213ENST00000485955 MAP1SQ66K74 1059 aaPredicted RBP7.22□□□□□ -1.25
VPS41-213ENST00000485955 PAOXQ6QHF9 649 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 GATA6Q92908 595 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 LGR6Q9HBX8 967 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 DISC1Q9NRI5 854 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 KRT82Q9NSB4 513 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 PRKAG2Q9UGJ0 569 aa7.22□□□□□ -1.25
VPS41-213ENST00000485955 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.21□□□□□ -1.26
VPS41-213ENST00000485955 CELA3AP09093 270 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 SLFN14P0C7P3 912 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 GNA15P30679 374 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 CD97P48960 835 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 TAGLNQ01995 201 aaKnown RBP7.21□□□□□ -1.26
VPS41-213ENST00000485955 FANCD2OSQ96PS1 177 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 CBX8Q9HC52 389 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 CACNA2D2Q9NY47 1150 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 PPM1HQ9ULR3 514 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 AK5Q9Y6K8 562 aa7.21□□□□□ -1.26
VPS41-213ENST00000485955 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
VPS41-213ENST00000485955 ID3Q02535 119 aa7.2□□□□□ -1.26
VPS41-213ENST00000485955 SEZ6L2Q6UXD5 910 aa7.2□□□□□ -1.26
VPS41-213ENST00000485955 GPBAR1Q8TDU6 330 aa7.2□□□□□ -1.26
VPS41-213ENST00000485955 ANKRD24Q8TF21 1146 aa7.2□□□□□ -1.26
VPS41-213ENST00000485955 CEP44Q9C0F1 390 aa7.2□□□□□ -1.26
VPS41-213ENST00000485955 C1GALT1Q9NS00 363 aa7.2□□□□□ -1.26
VPS41-213ENST00000485955 COBLO75128 1261 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 EIF4BP23588 611 aaKnown RBP7.19□□□□□ -1.26
VPS41-213ENST00000485955 FBXO33Q7Z6M2 555 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 ZAR1Q86SH2 424 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 FRMD6Q96NE9 622 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 TBC1D32Q96NH3 1257 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 YIPF2Q9BWQ6 316 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 EMILIN2Q9BXX0 1053 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 PCMTD2Q9NV79 361 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 PARP2Q9UGN5 583 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 DAGLAQ9Y4D2 1042 aa7.19□□□□□ -1.26
VPS41-213ENST00000485955 FAM170BA6NMN3 283 aa7.18□□□□□ -1.26
VPS41-213ENST00000485955 MAP7Q14244 749 aa7.18□□□□□ -1.26
VPS41-213ENST00000485955 TTLL4Q14679 1199 aa7.18□□□□□ -1.26
VPS41-213ENST00000485955 ZC3H12AQ5D1E8 599 aaKnown RBP7.18□□□□□ -1.26
VPS41-213ENST00000485955 FAM161BQ96MY7 647 aa7.18□□□□□ -1.26
VPS41-213ENST00000485955 ADAMTS4O75173 837 aa7.17□□□□□ -1.26
VPS41-213ENST00000485955 HCLS1P14317 486 aaPredicted RBP7.17□□□□□ -1.26
VPS41-213ENST00000485955 PTPN11Q06124 597 aaPredicted RBP7.17□□□□□ -1.26
VPS41-213ENST00000485955 CCDC27Q2M243 656 aa7.17□□□□□ -1.26
VPS41-213ENST00000485955 PCNX4Q63HM2 1172 aa7.17□□□□□ -1.26
VPS41-213ENST00000485955 ATXN3LQ9H3M9 355 aa7.17□□□□□ -1.26
VPS41-213ENST00000485955 ATG3Q9NT62 314 aa7.17□□□□□ -1.26
VPS41-213ENST00000485955 KIAA1324LA8MWY0 1029 aaPredicted RBP7.16□□□□□ -1.26
VPS41-213ENST00000485955 NEFMP07197 916 aa7.16□□□□□ -1.26
VPS41-213ENST00000485955 DAB2P98082 770 aa7.16□□□□□ -1.26
VPS41-213ENST00000485955 ACSBG1Q96GR2 724 aa7.16□□□□□ -1.26
VPS41-213ENST00000485955 OSBPL1AQ9BXW6 950 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms