RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TTC41PQ6P2S7 1318 aa14.4□□□□□ -0.1
HPS4-214ENST00000485842 TMEM88BA6NKF7 163 aa14.39□□□□□ -0.11
HPS4-214ENST00000485842 NUCB1Q02818 461 aa14.39□□□□□ -0.11
HPS4-214ENST00000485842 MAP3K12Q12852 859 aa14.39□□□□□ -0.11
HPS4-214ENST00000485842 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
HPS4-214ENST00000485842 MAGEB6Q8N7X4 407 aa14.39□□□□□ -0.11
HPS4-214ENST00000485842 NOL10Q9BSC4 688 aaKnown RBP14.39□□□□□ -0.11
HPS4-214ENST00000485842 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
HPS4-214ENST00000485842 USP40Q9NVE5 1235 aa14.39□□□□□ -0.11
HPS4-214ENST00000485842 MYH7P12883 1935 aa14.39□□□□□ -0.11
HPS4-214ENST00000485842 ERC2O15083 957 aa14.38□□□□□ -0.11
HPS4-214ENST00000485842 MAP4K4O95819 1239 aaPredicted RBP14.38□□□□□ -0.11
HPS4-214ENST00000485842 CYP7A1P22680 504 aa14.38□□□□□ -0.11
HPS4-214ENST00000485842 TNNI2P48788 182 aa14.38□□□□□ -0.11
HPS4-214ENST00000485842 RASA3Q14644 834 aa14.38□□□□□ -0.11
HPS4-214ENST00000485842 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
HPS4-214ENST00000485842 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
HPS4-214ENST00000485842 ABT1Q9ULW3 272 aaKnown RBP14.38□□□□□ -0.11
HPS4-214ENST00000485842 SALL3Q9BXA9 1300 aa14.38□□□□□ -0.11
HPS4-214ENST00000485842 GPR75-ASB3A0A0A6YYF3 556 aa14.37□□□□□ -0.11
HPS4-214ENST00000485842 GLRX3O76003 335 aaKnown RBP14.37□□□□□ -0.11
HPS4-214ENST00000485842 NF2P35240 595 aa14.37□□□□□ -0.11
HPS4-214ENST00000485842 CST9Q5W186 159 aa14.37□□□□□ -0.11
HPS4-214ENST00000485842 ADGRA1Q86SQ6 560 aa14.37□□□□□ -0.11
HPS4-214ENST00000485842 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
HPS4-214ENST00000485842 TMEM39BQ9GZU3 492 aa14.37□□□□□ -0.11
HPS4-214ENST00000485842 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
HPS4-214ENST00000485842 PPP2R3BQ9Y5P8 575 aa14.37□□□□□ -0.11
HPS4-214ENST00000485842 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
HPS4-214ENST00000485842 PDE6AP16499 860 aa14.36□□□□□ -0.11
HPS4-214ENST00000485842 PDE1AP54750 535 aa14.36□□□□□ -0.11
HPS4-214ENST00000485842 TCP10Q12799 353 aa14.36□□□□□ -0.11
HPS4-214ENST00000485842 NFIAQ12857 509 aa14.36□□□□□ -0.11
HPS4-214ENST00000485842 TTLL12Q14166 644 aaPredicted RBP14.36□□□□□ -0.11
HPS4-214ENST00000485842 SLC9C2Q5TAH2 1124 aa14.36□□□□□ -0.11
HPS4-214ENST00000485842 MIGA1Q8NAN2 632 aa14.36□□□□□ -0.11
HPS4-214ENST00000485842 GBA2Q9HCG7 927 aaPredicted RBP14.36□□□□□ -0.11
HPS4-214ENST00000485842 SSC5DA1L4H1 1573 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 AK9Q5TCS8 1911 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 PAPPA2Q9BXP8 1791 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 IGSF3O75054 1194 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 BAG3O95817 575 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 RGS3P49796 1198 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 DYNLL1P63167 89 aaKnown RBP14.35□□□□□ -0.11
HPS4-214ENST00000485842 PICALMQ13492 652 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 PRKG1Q13976 671 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 FKBP1CQ5VVH2 108 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 TEX11Q8IYF3 940 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 C2orf69Q8N8R5 385 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.35□□□□□ -0.11
HPS4-214ENST00000485842 STAP2Q9UGK3 403 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 ZNF532Q9HCE3 1301 aa14.35□□□□□ -0.11
HPS4-214ENST00000485842 RFX7Q2KHR2 1363 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 CDK5RAP2Q96SN8 1893 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 RHBDL3P58872 404 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 NBPF12Q5TAG4 269 aaPredicted RBP14.34□□□□□ -0.11
HPS4-214ENST00000485842 PAXIP1Q6ZW49 1069 aaPredicted RBP14.34□□□□□ -0.11
HPS4-214ENST00000485842 FAM83AQ86UY5 434 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 PLEKHM2Q8IWE5 1019 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 CDAN1Q8IWY9 1227 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 SH3RF3Q8TEJ3 882 aaPredicted RBP14.34□□□□□ -0.11
HPS4-214ENST00000485842 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 FAM198AQ9UFP1 575 aa14.34□□□□□ -0.11
HPS4-214ENST00000485842 MKRN1Q9UHC7 482 aaKnown RBP14.34□□□□□ -0.11
HPS4-214ENST00000485842 WDHD1O75717 1129 aaPredicted RBP14.33□□□□□ -0.12
HPS4-214ENST00000485842 PLCG2P16885 1265 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 ADD2P35612 726 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 HUNKP57058 714 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 SUPT20HL1Q3ZLR7 823 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 SLFNL1Q499Z3 407 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 MOB2Q70IA6 237 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 FAM151AQ8WW52 585 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 TEPSINQ96N21 525 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 FSD1Q9BTV5 496 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 DDX4Q9NQI0 724 aaKnown RBP14.33□□□□□ -0.12
HPS4-214ENST00000485842 FZD1Q9UP38 647 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 TLL2Q9Y6L7 1015 aa14.33□□□□□ -0.12
HPS4-214ENST00000485842 RPAP1Q9BWH6 1393 aaPredicted RBP14.33□□□□□ -0.12
HPS4-214ENST00000485842 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
HPS4-214ENST00000485842 MAGEB6P1A0A0J9YX57 407 aa14.32□□□□□ -0.12
HPS4-214ENST00000485842 CHGBP05060 677 aa14.32□□□□□ -0.12
HPS4-214ENST00000485842 PDE4AP27815 886 aa14.32□□□□□ -0.12
HPS4-214ENST00000485842 PPP4CP60510 307 aa14.32□□□□□ -0.12
HPS4-214ENST00000485842 GRM1Q13255 1194 aa14.32□□□□□ -0.12
HPS4-214ENST00000485842 TMED8Q6PL24 325 aaPredicted RBP14.32□□□□□ -0.12
HPS4-214ENST00000485842 CENPQQ7L2Z9 268 aaPredicted RBP14.32□□□□□ -0.12
HPS4-214ENST00000485842 SAPCD2Q86UD0 394 aa14.32□□□□□ -0.12
HPS4-214ENST00000485842 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
HPS4-214ENST00000485842 ZFPM1Q8IX07 1006 aa14.32□□□□□ -0.12
HPS4-214ENST00000485842 TCRBV5S4A2TA0A5A2 114 aa14.31□□□□□ -0.12
HPS4-214ENST00000485842 ENTPD3O75355 529 aa14.31□□□□□ -0.12
HPS4-214ENST00000485842 FKBP1BP68106 108 aa14.31□□□□□ -0.12
HPS4-214ENST00000485842 MAPKAPK5Q8IW41 473 aa14.31□□□□□ -0.12
HPS4-214ENST00000485842 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
HPS4-214ENST00000485842 ANGEL1Q9UNK9 670 aaKnown RBP14.31□□□□□ -0.12
HPS4-214ENST00000485842 NAV1Q8NEY1 1877 aa14.3□□□□□ -0.12
HPS4-214ENST00000485842 RASSF10A6NK89 507 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms