RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 CYP21A2P08686 494 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 PRDX5P30044 214 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 TDO2P48775 406 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 TGFB2P61812 414 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 FGD1P98174 961 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 ANKRD1Q15327 319 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 ALX1Q15699 326 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
CTSA-208ENST00000485627 SLF2Q8IX21 1173 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 NSUN4Q96CB9 384 aaKnown RBP11.32□□□□□ -0.6
CTSA-208ENST00000485627 NAPBQ9H115 298 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 MYH7P12883 1935 aa11.32□□□□□ -0.6
CTSA-208ENST00000485627 RPS6KB1P23443 525 aa11.31□□□□□ -0.6
CTSA-208ENST00000485627 TRDNQ13061 729 aa11.31□□□□□ -0.6
CTSA-208ENST00000485627 CCDC93Q567U6 631 aa11.31□□□□□ -0.6
CTSA-208ENST00000485627 SOGA3Q5TF21 947 aa11.31□□□□□ -0.6
CTSA-208ENST00000485627 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
CTSA-208ENST00000485627 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
CTSA-208ENST00000485627 ZSCAN31Q96LW9 406 aaPredicted RBP11.31□□□□□ -0.6
CTSA-208ENST00000485627 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.31□□□□□ -0.6
CTSA-208ENST00000485627 LRRC37AA6NMS7 1700 aa11.31□□□□□ -0.6
CTSA-208ENST00000485627 COL11A2P13942 1736 aaPredicted RBP11.31□□□□□ -0.6
CTSA-208ENST00000485627 E7EWF7 191 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 C21orf2O43822 256 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 BAG3O95817 575 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 CPA1P15085 419 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 KCNA3P22001 575 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 AK2P54819 239 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 HAND2P61296 217 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 GTF2IP78347 998 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 FSTL1Q12841 308 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 MFSD14BQ5SR56 506 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 TTLL5Q6EMB2 1281 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
CTSA-208ENST00000485627 CERS3Q8IU89 383 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 IFNL3Q8IZI9 196 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 TTC14Q96N46 770 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
CTSA-208ENST00000485627 CRNKL1Q9BZJ0 848 aaKnown RBP11.3□□□□□ -0.6
CTSA-208ENST00000485627 RNF181Q9P0P0 153 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 DOCK2Q92608 1830 aa11.3□□□□□ -0.6
CTSA-208ENST00000485627 DHX32Q7L7V1 743 aaKnown RBP11.29□□□□□ -0.6
CTSA-208ENST00000485627 NCOA7Q8NI08 942 aa11.29□□□□□ -0.6
CTSA-208ENST00000485627 C7orf43Q8WVR3 580 aa11.29□□□□□ -0.6
CTSA-208ENST00000485627 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
CTSA-208ENST00000485627 SH2B1Q9NRF2 756 aaPredicted RBP11.29□□□□□ -0.6
CTSA-208ENST00000485627 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTSA-208ENST00000485627 CHMP5Q9NZZ3 219 aa11.29□□□□□ -0.6
CTSA-208ENST00000485627 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
CTSA-208ENST00000485627 SUGT1Q9Y2Z0 365 aa11.29□□□□□ -0.6
CTSA-208ENST00000485627 MYH13Q9UKX3 1938 aa11.29□□□□□ -0.6
CTSA-208ENST00000485627 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 KIF13BQ9NQT8 1826 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 GSG1L2A8MUP6 293 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 FOXP2O15409 715 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 PRKAB2O43741 272 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 PLCG2P16885 1265 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
CTSA-208ENST00000485627 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 ADGRA1Q86SQ6 560 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 RIOK1Q9BRS2 568 aaKnown RBP11.28□□□□□ -0.6
CTSA-208ENST00000485627 ALDH8A1Q9H2A2 487 aaPredicted RBP11.28□□□□□ -0.6
CTSA-208ENST00000485627 DBNDD1Q9H9R9 158 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
CTSA-208ENST00000485627 TAF6LQ9Y6J9 622 aa11.28□□□□□ -0.6
CTSA-208ENST00000485627 MYO5AQ9Y4I1 1855 aaKnown RBP11.27□□□□□ -0.6
CTSA-208ENST00000485627 ECE2O60344 883 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 MCM5P33992 734 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 USP5P45974 858 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 RASSF7Q02833 373 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 KIAA2012Q0VF49 1180 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
CTSA-208ENST00000485627 STOX1Q6ZVD7 989 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 AMOTL1Q8IY63 956 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 SDR42E1Q8WUS8 393 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.61
CTSA-208ENST00000485627 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.61
CTSA-208ENST00000485627 RNF41Q9H4P4 317 aaPredicted RBP11.27□□□□□ -0.61
CTSA-208ENST00000485627 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 EPB41L4AQ9HCS5 686 aaPredicted RBP11.27□□□□□ -0.61
CTSA-208ENST00000485627 ATP8A2Q9NTI2 1148 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.27□□□□□ -0.61
CTSA-208ENST00000485627 SLX4Q8IY92 1834 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
CTSA-208ENST00000485627 LTBP1Q14766 1721 aa11.26□□□□□ -0.61
CTSA-208ENST00000485627 MINDY4BA8MYZ0 360 aa11.26□□□□□ -0.61
CTSA-208ENST00000485627 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
CTSA-208ENST00000485627 CUL4AQ13619 759 aa11.26□□□□□ -0.61
CTSA-208ENST00000485627 AOC3Q16853 763 aa11.26□□□□□ -0.61
CTSA-208ENST00000485627 MFSD6Q6ZSS7 791 aa11.26□□□□□ -0.61
CTSA-208ENST00000485627 Q6ZUG5 572 aa11.26□□□□□ -0.61
CTSA-208ENST00000485627 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms