RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 TDRD7Q8NHU6 1098 aaKnown RBP22.98■■□□□ 1.27
DDR1-245ENST00000484556 CHMP3Q9Y3E7 222 aa22.98■■□□□ 1.27
DDR1-245ENST00000484556 MIGA2Q7L4E1 593 aa22.97■■□□□ 1.27
DDR1-245ENST00000484556 G2E3Q7L622 706 aa22.97■■□□□ 1.27
DDR1-245ENST00000484556 TSPYL6Q8N831 410 aa22.97■■□□□ 1.27
DDR1-245ENST00000484556 PARK7Q99497 189 aaKnown RBP22.97■■□□□ 1.27
DDR1-245ENST00000484556 CRISPLD2Q9H0B8 497 aa22.97■■□□□ 1.27
DDR1-245ENST00000484556 PAK6Q9NQU5 681 aaPredicted RBP22.97■■□□□ 1.27
DDR1-245ENST00000484556 GNAI1P63096 354 aa22.96■■□□□ 1.27
DDR1-245ENST00000484556 IFIT5Q13325 482 aaKnown RBP22.96■■□□□ 1.27
DDR1-245ENST00000484556 TAOK2Q9UL54 1235 aa22.96■■□□□ 1.27
DDR1-245ENST00000484556 KCNH4Q9UQ05 1017 aa22.96■■□□□ 1.27
DDR1-245ENST00000484556 DDX60LQ5H9U9 1706 aaKnown RBP22.96■■□□□ 1.27
DDR1-245ENST00000484556 ZNF594Q96JF6 807 aaPredicted RBP22.95■■□□□ 1.26
DDR1-245ENST00000484556 ZNF341Q9BYN7 854 aa22.95■■□□□ 1.26
DDR1-245ENST00000484556 EYSQ5T1H1 3165 aa22.94■■□□□ 1.26
DDR1-245ENST00000484556 RPTORQ8N122 1335 aa22.94■■□□□ 1.26
DDR1-245ENST00000484556 DCAF15Q66K64 600 aa22.94■■□□□ 1.26
DDR1-245ENST00000484556 TMOD2Q9NZR1 351 aa22.94■■□□□ 1.26
DDR1-245ENST00000484556 HIBADHP31937 336 aaKnown RBP22.93■■□□□ 1.26
DDR1-245ENST00000484556 WDR43Q15061 677 aaKnown RBP eCLIP22.93■■□□□ 1.26
DDR1-245ENST00000484556 GPAT2Q6NUI2 795 aa22.93■■□□□ 1.26
DDR1-245ENST00000484556 PXYLP1Q8TE99 480 aa22.93■■□□□ 1.26
DDR1-245ENST00000484556 UBE2OQ9C0C9 1292 aaKnown RBP22.93■■□□□ 1.26
DDR1-245ENST00000484556 IQSEC3Q9UPP2 1182 aaPredicted RBP22.93■■□□□ 1.26
DDR1-245ENST00000484556 FOXO4P98177 505 aa22.92■■□□□ 1.26
DDR1-245ENST00000484556 CHAF1AQ13111 956 aaPredicted RBP22.92■■□□□ 1.26
DDR1-245ENST00000484556 FAM83AQ86UY5 434 aa22.92■■□□□ 1.26
DDR1-245ENST00000484556 HOOK2Q96ED9 719 aa22.92■■□□□ 1.26
DDR1-245ENST00000484556 GUCD1Q96NT3 240 aa22.92■■□□□ 1.26
DDR1-245ENST00000484556 ADAMTS8Q9UP79 889 aa22.92■■□□□ 1.26
DDR1-245ENST00000484556 RPAP1Q9BWH6 1393 aaPredicted RBP22.91■■□□□ 1.26
DDR1-245ENST00000484556 AK9Q5TCS8 1911 aa22.91■■□□□ 1.26
DDR1-245ENST00000484556 TNPO2O14787 897 aaKnown RBP22.91■■□□□ 1.26
DDR1-245ENST00000484556 TEKT1Q969V4 418 aa22.91■■□□□ 1.26
DDR1-245ENST00000484556 FAM84BQ96KN1 310 aaPredicted RBP22.91■■□□□ 1.26
DDR1-245ENST00000484556 STK31Q9BXU1 1019 aa22.91■■□□□ 1.26
DDR1-245ENST00000484556 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.91■■□□□ 1.26
DDR1-245ENST00000484556 MYH16Q9H6N6 1097 aa22.91■■□□□ 1.26
DDR1-245ENST00000484556 CNNM1Q9NRU3 951 aa22.91■■□□□ 1.26
DDR1-245ENST00000484556 LDHAL6AQ6ZMR3 332 aa22.9■■□□□ 1.26
DDR1-245ENST00000484556 FAM161BQ96MY7 647 aa22.9■■□□□ 1.26
DDR1-245ENST00000484556 PRDM6Q9NQX0 595 aa22.9■■□□□ 1.26
DDR1-245ENST00000484556 DOCK3Q8IZD9 2030 aa22.9■■□□□ 1.26
DDR1-245ENST00000484556 CAPN2P17655 700 aa22.89■■□□□ 1.25
DDR1-245ENST00000484556 IRF5Q13568 498 aa22.89■■□□□ 1.25
DDR1-245ENST00000484556 TAF7LQ5H9L4 462 aa22.89■■□□□ 1.25
DDR1-245ENST00000484556 HDLBPQ00341 1268 aaKnown RBP22.88■■□□□ 1.25
DDR1-245ENST00000484556 RALBP1Q15311 655 aa22.88■■□□□ 1.25
DDR1-245ENST00000484556 CHMP4AQ9BY43 222 aa22.88■■□□□ 1.25
DDR1-245ENST00000484556 APOBEC3HQ6NTF7 200 aaKnown RBP22.87■■□□□ 1.25
DDR1-245ENST00000484556 LMBR1LQ6UX01 489 aa22.87■■□□□ 1.25
DDR1-245ENST00000484556 ZDHHC15Q96MV8 337 aa22.87■■□□□ 1.25
DDR1-245ENST00000484556 NBPF3Q9H094 633 aa22.87■■□□□ 1.25
DDR1-245ENST00000484556 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
DDR1-245ENST00000484556 UBE4AQ14139 1066 aa22.86■■□□□ 1.25
DDR1-245ENST00000484556 EPHA10Q5JZY3 1008 aa22.86■■□□□ 1.25
DDR1-245ENST00000484556 FKBP1CQ5VVH2 108 aa22.86■■□□□ 1.25
DDR1-245ENST00000484556 ANKLE1Q8NAG6 615 aa22.86■■□□□ 1.25
DDR1-245ENST00000484556 LINS1Q8NG48 757 aa22.86■■□□□ 1.25
DDR1-245ENST00000484556 C11orf49Q9H6J7 331 aa22.86■■□□□ 1.25
DDR1-245ENST00000484556 ZNF112Q9UJU3 913 aa22.86■■□□□ 1.25
DDR1-245ENST00000484556 LAMA2P24043 3122 aaKnown RBP22.86■■□□□ 1.25
DDR1-245ENST00000484556 PTPRFP10586 1907 aa22.85■■□□□ 1.25
DDR1-245ENST00000484556 SLC4A2P04920 1241 aa22.85■■□□□ 1.25
DDR1-245ENST00000484556 CCDC57Q2TAC2 916 aa22.85■■□□□ 1.25
DDR1-245ENST00000484556 DNAAF4Q8WXU2 420 aa22.85■■□□□ 1.25
DDR1-245ENST00000484556 TSR2Q969E8 191 aaKnown RBP22.85■■□□□ 1.25
DDR1-245ENST00000484556 APAF1O14727 1248 aa22.84■■□□□ 1.25
DDR1-245ENST00000484556 TCP10Q12799 353 aa22.84■■□□□ 1.25
DDR1-245ENST00000484556 FLIIQ13045 1269 aa22.84■■□□□ 1.25
DDR1-245ENST00000484556 NOL9Q5SY16 702 aaKnown RBP22.84■■□□□ 1.25
DDR1-245ENST00000484556 GADL1Q6ZQY3 521 aa22.84■■□□□ 1.25
DDR1-245ENST00000484556 CXCL11O14625 94 aa22.83■■□□□ 1.25
DDR1-245ENST00000484556 FKBP5Q13451 457 aaPredicted RBP22.83■■□□□ 1.25
DDR1-245ENST00000484556 VPS37DQ86XT2 251 aa22.83■■□□□ 1.25
DDR1-245ENST00000484556 SMCR8Q8TEV9 937 aaPredicted RBP22.83■■□□□ 1.25
DDR1-245ENST00000484556 POTEB2H3BUK9 544 aa22.82■■□□□ 1.24
DDR1-245ENST00000484556 FRAT2O75474 233 aaPredicted RBP22.82■■□□□ 1.24
DDR1-245ENST00000484556 MDM2Q00987 491 aaPredicted RBP22.82■■□□□ 1.24
DDR1-245ENST00000484556 TRIM32Q13049 653 aa22.82■■□□□ 1.24
DDR1-245ENST00000484556 TBC1D22AQ8WUA7 517 aa22.82■■□□□ 1.24
DDR1-245ENST00000484556 COA7Q96BR5 231 aa22.82■■□□□ 1.24
DDR1-245ENST00000484556 PUS3Q9BZE2 481 aaKnown RBP22.82■■□□□ 1.24
DDR1-245ENST00000484556 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
DDR1-245ENST00000484556 PRUNE2Q8WUY3 3088 aa22.81■■□□□ 1.24
DDR1-245ENST00000484556 DOCK2Q92608 1830 aa22.81■■□□□ 1.24
DDR1-245ENST00000484556 A0A0G2JLL6 359 aaPredicted RBP22.81■■□□□ 1.24
DDR1-245ENST00000484556 PRRT2Q7Z6L0 340 aaPredicted RBP22.81■■□□□ 1.24
DDR1-245ENST00000484556 FAM151AQ8WW52 585 aa22.81■■□□□ 1.24
DDR1-245ENST00000484556 ZHX2Q9Y6X8 837 aa22.81■■□□□ 1.24
DDR1-245ENST00000484556 PFASO15067 1338 aa22.81■■□□□ 1.24
DDR1-245ENST00000484556 COL2A1P02458 1487 aaPredicted RBP22.8■■□□□ 1.24
DDR1-245ENST00000484556 HMGCRP04035 888 aa22.8■■□□□ 1.24
DDR1-245ENST00000484556 FASTKD5Q7L8L6 764 aaKnown RBP22.8■■□□□ 1.24
DDR1-245ENST00000484556 FBXO33Q7Z6M2 555 aa22.8■■□□□ 1.24
DDR1-245ENST00000484556 ANKRD13CQ8N6S4 541 aa22.8■■□□□ 1.24
DDR1-245ENST00000484556 NFIAQ12857 509 aa22.79■■□□□ 1.24
DDR1-245ENST00000484556 TWISTNBQ3B726 338 aaPredicted RBP22.79■■□□□ 1.24
DDR1-245ENST00000484556 FAM109BQ6ICB4 259 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms