RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 FILIP1Q7Z7B0 1213 aa22.81■■□□□ 1.24
LIMS2-215ENST00000484252 TRMT112Q9UI30 125 aaKnown RBP22.81■■□□□ 1.24
LIMS2-215ENST00000484252 ERVV-1B6SEH8 477 aa22.8■■□□□ 1.24
LIMS2-215ENST00000484252 CYP19A1P11511 503 aaPredicted RBP22.8■■□□□ 1.24
LIMS2-215ENST00000484252 PUM3Q15397 648 aaKnown RBP22.8■■□□□ 1.24
LIMS2-215ENST00000484252 MROH5Q6ZUA9 1318 aa22.8■■□□□ 1.24
LIMS2-215ENST00000484252 TCRBV5S4A2TA0A5A2 114 aa22.8■■□□□ 1.24
LIMS2-215ENST00000484252 ARID5BQ14865 1188 aa22.8■■□□□ 1.24
LIMS2-215ENST00000484252 LPIN2Q92539 896 aa22.8■■□□□ 1.24
LIMS2-215ENST00000484252 AK7Q96M32 723 aa22.8■■□□□ 1.24
LIMS2-215ENST00000484252 GJB4Q9NTQ9 266 aa22.8■■□□□ 1.24
LIMS2-215ENST00000484252 LRP5O75197 1615 aa22.79■■□□□ 1.24
LIMS2-215ENST00000484252 ZNF335Q9H4Z2 1342 aaPredicted RBP22.79■■□□□ 1.24
LIMS2-215ENST00000484252 ZBTB43O43298 467 aa22.79■■□□□ 1.24
LIMS2-215ENST00000484252 KRT40Q6A162 431 aa22.79■■□□□ 1.24
LIMS2-215ENST00000484252 NYAP1Q6ZVC0 841 aa22.79■■□□□ 1.24
LIMS2-215ENST00000484252 SGMS1Q86VZ5 419 aa22.79■■□□□ 1.24
LIMS2-215ENST00000484252 VPS37DQ86XT2 251 aa22.79■■□□□ 1.24
LIMS2-215ENST00000484252 CCDC150Q8NCX0 1101 aa22.79■■□□□ 1.24
LIMS2-215ENST00000484252 STRBPQ96SI9 672 aaKnown RBP22.79■■□□□ 1.24
LIMS2-215ENST00000484252 GTPBP4Q9BZE4 634 aaKnown RBP22.79■■□□□ 1.24
LIMS2-215ENST00000484252 FAM237AA0A1B0GTK4 181 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 IKBKBO14920 756 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 PTPN14Q15678 1187 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 NBPF11Q86T75 865 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 AIDAQ96BJ3 306 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 KIF2AO00139 706 aaPredicted RBP22.78■■□□□ 1.24
LIMS2-215ENST00000484252 PHKA1P46020 1223 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 TRIM29Q14134 588 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 PPP4R3BQ5MIZ7 849 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 IGDCC4Q8TDY8 1250 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 FBXW7Q969H0 707 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 HPSEQ9Y251 543 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 ITGB4P16144 1822 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 ARAP2Q8WZ64 1704 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.78■■□□□ 1.24
LIMS2-215ENST00000484252 STK36Q9NRP7 1315 aa22.78■■□□□ 1.24
LIMS2-215ENST00000484252 B4E1Z4 1266 aa22.77■■□□□ 1.24
LIMS2-215ENST00000484252 BCL9O00512 1426 aa22.77■■□□□ 1.24
LIMS2-215ENST00000484252 FGFR2P21802 821 aa22.77■■□□□ 1.24
LIMS2-215ENST00000484252 LIFRP42702 1097 aa22.77■■□□□ 1.24
LIMS2-215ENST00000484252 SYKP43405 635 aa22.77■■□□□ 1.24
LIMS2-215ENST00000484252 GNL2Q13823 731 aaKnown RBP22.77■■□□□ 1.24
LIMS2-215ENST00000484252 PATL2C9JE40 543 aaKnown RBP22.77■■□□□ 1.23
LIMS2-215ENST00000484252 WDHD1O75717 1129 aaPredicted RBP22.77■■□□□ 1.23
LIMS2-215ENST00000484252 U2AF2P26368 475 aaKnown RBP eCLIP22.77■■□□□ 1.23
LIMS2-215ENST00000484252 IARSP41252 1262 aaKnown RBP22.77■■□□□ 1.23
LIMS2-215ENST00000484252 NCBP1Q09161 790 aaKnown RBP22.77■■□□□ 1.23
LIMS2-215ENST00000484252 CCAR2Q8N163 923 aaKnown RBP22.77■■□□□ 1.23
LIMS2-215ENST00000484252 ARID3AQ99856 593 aa22.77■■□□□ 1.23
LIMS2-215ENST00000484252 TUBE1Q9UJT0 475 aa22.77■■□□□ 1.23
LIMS2-215ENST00000484252 WWC3Q9ULE0 1092 aa22.77■■□□□ 1.23
LIMS2-215ENST00000484252 PTPAQ15257 358 aa22.76■■□□□ 1.23
LIMS2-215ENST00000484252 NFXL1Q6ZNB6 911 aa22.76■■□□□ 1.23
LIMS2-215ENST00000484252 CNNM2Q9H8M5 875 aa22.76■■□□□ 1.23
LIMS2-215ENST00000484252 LY9Q9HBG7 655 aa22.76■■□□□ 1.23
LIMS2-215ENST00000484252 MROH7-TTC4A0A0A0MT08 1334 aa22.76■■□□□ 1.23
LIMS2-215ENST00000484252 GOLGA8AA7E2F4 631 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 SMC2O95347 1197 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 SLC5A1P13866 664 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 CDC27P30260 824 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 KCNJ6P48051 423 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 NTRK3Q16288 839 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 TMEM67Q5HYA8 995 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 WASF1Q92558 559 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 XPO4Q9C0E2 1151 aaKnown RBP22.75■■□□□ 1.23
LIMS2-215ENST00000484252 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.75■■□□□ 1.23
LIMS2-215ENST00000484252 DENND2AQ9ULE3 1009 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 NRDCO43847 1150 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 IL6STP40189 918 aaPredicted RBP22.75■■□□□ 1.23
LIMS2-215ENST00000484252 MAP3K12Q12852 859 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 NCAPHQ15003 741 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 MICU3Q86XE3 530 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 SPATA5Q8NB90 893 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 AIFM3Q96NN9 605 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 IFNKQ9P0W0 207 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 NID2Q14112 1375 aa22.75■■□□□ 1.23
LIMS2-215ENST00000484252 NHSL1Q5SYE7 1610 aa22.74■■□□□ 1.23
LIMS2-215ENST00000484252 USP27XA6NNY8 438 aa22.74■■□□□ 1.23
LIMS2-215ENST00000484252 CUTAO60888 179 aa22.74■■□□□ 1.23
LIMS2-215ENST00000484252 ZSCAN20P17040 1043 aaPredicted RBP22.74■■□□□ 1.23
LIMS2-215ENST00000484252 MARCKSP29966 332 aaPredicted RBP22.74■■□□□ 1.23
LIMS2-215ENST00000484252 MAP3K14Q99558 947 aa22.74■■□□□ 1.23
LIMS2-215ENST00000484252 ZBTB1Q9Y2K1 713 aa22.74■■□□□ 1.23
LIMS2-215ENST00000484252 DISP2A7MBM2 1401 aa22.74■■□□□ 1.23
LIMS2-215ENST00000484252 BIN1O00499 593 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 KIF20AO95235 890 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 RESP18Q5W5W9 173 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 ZNF34Q8IZ26 560 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 IFNL3Q8IZI9 196 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 KRT23Q9C075 422 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 NAPBQ9H115 298 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 TIAM2Q8IVF5 1701 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 NUP98P52948 1817 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 MYO1BO43795 1136 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 SSRP1Q08945 709 aaKnown RBP22.73■■□□□ 1.23
LIMS2-215ENST00000484252 SHC4Q6S5L8 630 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 DZIP3Q86Y13 1208 aaKnown RBP22.73■■□□□ 1.23
LIMS2-215ENST00000484252 PHKBQ93100 1093 aa22.73■■□□□ 1.23
LIMS2-215ENST00000484252 SLC4A9Q96Q91 983 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms