RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 NID2Q14112 1375 aa11.32□□□□□ -0.6
UFD1-208ENST00000484101 VPS37CA5D8V6 355 aaPredicted RBP11.32□□□□□ -0.6
UFD1-208ENST00000484101 PRC1O43663 620 aa11.32□□□□□ -0.6
UFD1-208ENST00000484101 MBD4O95243 580 aa11.32□□□□□ -0.6
UFD1-208ENST00000484101 APPP05067 770 aa11.32□□□□□ -0.6
UFD1-208ENST00000484101 BCAMP50895 628 aa11.32□□□□□ -0.6
UFD1-208ENST00000484101 NFIXQ14938 502 aa11.32□□□□□ -0.6
UFD1-208ENST00000484101 CPLX2Q6PUV4 134 aaKnown RBP11.32□□□□□ -0.6
UFD1-208ENST00000484101 NECAB1Q8N987 351 aa11.32□□□□□ -0.6
UFD1-208ENST00000484101 GZF1Q9H116 711 aaPredicted RBP11.32□□□□□ -0.6
UFD1-208ENST00000484101 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
UFD1-208ENST00000484101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
UFD1-208ENST00000484101 H3BQV1 296 aa11.31□□□□□ -0.6
UFD1-208ENST00000484101 HIBADHP31937 336 aaKnown RBP11.31□□□□□ -0.6
UFD1-208ENST00000484101 KCNQ4P56696 695 aa11.31□□□□□ -0.6
UFD1-208ENST00000484101 SCRN1Q12765 414 aa11.31□□□□□ -0.6
UFD1-208ENST00000484101 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
UFD1-208ENST00000484101 CRY2Q49AN0 593 aa11.31□□□□□ -0.6
UFD1-208ENST00000484101 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
UFD1-208ENST00000484101 COL23A1Q86Y22 540 aaPredicted RBP11.31□□□□□ -0.6
UFD1-208ENST00000484101 CELF1Q92879 486 aaKnown RBP11.31□□□□□ -0.6
UFD1-208ENST00000484101 TCEANC2Q96MN5 208 aa11.31□□□□□ -0.6
UFD1-208ENST00000484101 ANGEL1Q9UNK9 670 aaKnown RBP11.31□□□□□ -0.6
UFD1-208ENST00000484101 XDHP47989 1333 aa11.31□□□□□ -0.6
UFD1-208ENST00000484101 COL1A1P02452 1464 aaPredicted RBP11.31□□□□□ -0.6
UFD1-208ENST00000484101 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 CYP7A1P22680 504 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 PDIA3P30101 505 aaKnown RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 LIFRP42702 1097 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 TDO2P48775 406 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 MLLT1Q03111 559 aaPredicted RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 ZSCAN23Q3MJ62 389 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 TTLL5Q6EMB2 1281 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 CAVIN1Q6NZI2 390 aaKnown RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 ZNF804AQ7Z570 1209 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 SGMS1Q86VZ5 419 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 IFNL3Q8IZI9 196 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 TMTC2Q8N394 836 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 NSUN7Q8NE18 718 aaKnown RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 ANP32BQ92688 251 aaKnown RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 RBM17Q96I25 401 aaKnown RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 FAM84BQ96KN1 310 aaPredicted RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
UFD1-208ENST00000484101 BRIP1Q9BX63 1249 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 ANAPC4Q9UJX5 808 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 DLEC1Q9Y238 1755 aa11.3□□□□□ -0.6
UFD1-208ENST00000484101 GOLGA8BA8MQT2 603 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 GYS1P13807 737 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 TM4SF1P30408 202 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 GYG1P46976 350 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 GSTO1P78417 241 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 STK3Q13188 491 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 PPP2R5BQ15173 497 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 AKNAD1Q5T1N1 836 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
UFD1-208ENST00000484101 PRR5LQ6MZQ0 368 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 MFSD6Q6ZSS7 791 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 USP48Q86UV5 1035 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 WDR66Q8TBY9 1149 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 GPT2Q8TD30 523 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 FOXD4L4Q8WXT5 416 aaPredicted RBP11.29□□□□□ -0.6
UFD1-208ENST00000484101 CRAMP1Q96RY5 1269 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 SLC4A4Q9Y6R1 1079 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 LTBP1Q14766 1721 aa11.29□□□□□ -0.6
UFD1-208ENST00000484101 GSG1L2A8MUP6 293 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
UFD1-208ENST00000484101 CPLX1O14810 134 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 BBOX1O75936 387 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 ATP2B4P23634 1241 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
UFD1-208ENST00000484101 HAND2P61296 217 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 CDC37L1Q7L3B6 337 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 PRDM10Q9NQV6 1147 aa11.28□□□□□ -0.6
UFD1-208ENST00000484101 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
UFD1-208ENST00000484101 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 CCDC196A0A1B0GTZ2 297 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 ERICH2A1L162 156 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 KLRG2A4D1S0 409 aaPredicted RBP11.27□□□□□ -0.61
UFD1-208ENST00000484101 SERPINB2P05120 415 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 SLC3A2P08195 630 aaKnown RBP11.27□□□□□ -0.61
UFD1-208ENST00000484101 RGS19P49795 217 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 ANTXR2P58335 489 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 LRSAM1Q6UWE0 723 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 SYNE3Q6ZMZ3 975 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 NLGN1Q8N2Q7 840 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 LCORLQ8N3X6 602 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 WASF1Q92558 559 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.61
UFD1-208ENST00000484101 RIOK1Q9BRS2 568 aaKnown RBP11.27□□□□□ -0.61
UFD1-208ENST00000484101 CRNKL1Q9BZJ0 848 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms