RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 AIDAQ96BJ3 306 aa8.2□□□□□ -1.1
SEMA3D-204ENST00000484038 DYRK1BQ9Y463 629 aa8.2□□□□□ -1.1
SEMA3D-204ENST00000484038 ERBB4Q15303 1308 aa8.2□□□□□ -1.1
SEMA3D-204ENST00000484038 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 FAM196BA6NMK8 535 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 SEC13P55735 322 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 DPYDQ12882 1025 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 WDR44Q5JSH3 913 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 TBCELQ5QJ74 424 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 TSEN2Q8NCE0 465 aaKnown RBP8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 SBF1O95248 1867 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 TIAM2Q8IVF5 1701 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 A0A1B0GTH6 734 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 POLRMTO00411 1230 aaKnown RBP8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 CDK2AP1O14519 115 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 PTK7Q13308 1070 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 MTFR1Q15390 333 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 AMOTQ4VCS5 1084 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 AEBP1Q8IUX7 1158 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 VWA5B2Q8N398 1253 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 HINFPQ9BQA5 517 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 USP3Q9Y6I4 520 aa8.19□□□□□ -1.1
SEMA3D-204ENST00000484038 ADAMTS7Q9UKP4 1686 aa8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 USPL1Q5W0Q7 1092 aa8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 ANKMY2Q8IV38 441 aa8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 SLC9A9Q8IVB4 645 aa8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 PGBD3Q8N328 593 aa8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 SCHIP1Q9P0W5 487 aaPredicted RBP8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 ZNF232Q9UNY5 417 aa8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 CHMP3Q9Y3E7 222 aa8.18□□□□□ -1.1
SEMA3D-204ENST00000484038 H7C1W4 665 aa8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 LGR5O75473 907 aa8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 F11P03951 625 aa8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 HSPA1AP0DMV8 641 aaKnown RBP8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 HSPA1BP0DMV9 641 aaKnown RBP8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 INTS5Q6P9B9 1019 aaKnown RBP8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 SCN11AQ9UI33 1791 aa8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 DLEC1Q9Y238 1755 aa8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 AFDNP55196 1824 aaKnown RBP8.17□□□□□ -1.1
SEMA3D-204ENST00000484038 VEGFAP15692 232 aaPredicted RBP8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 LMNB1P20700 586 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 TM4SF1P30408 202 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 GMPRP36959 345 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 SULT6B1Q6IMI4 303 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 DNAJC10Q8IXB1 793 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 FAM200AQ8TCP9 573 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 ARID3AQ99856 593 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 TSPAN10Q9H1Z9 355 aaPredicted RBP8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 RUBCNLQ9H714 662 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 C1orf115Q9H7X2 142 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 CUEDC1Q9NWM3 386 aaPredicted RBP8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 NOVA2Q9UNW9 492 aaKnown RBP8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 IQSEC3Q9UPP2 1182 aaPredicted RBP8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 SOS1Q07889 1333 aaPredicted RBP8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 COL15A1P39059 1388 aa8.16□□□□□ -1.1
SEMA3D-204ENST00000484038 GLTPD2A6NH11 291 aa8.15□□□□□ -1.1
SEMA3D-204ENST00000484038 M0R2N6 131 aa8.15□□□□□ -1.1
SEMA3D-204ENST00000484038 MSX1P28360 303 aa8.15□□□□□ -1.1
SEMA3D-204ENST00000484038 PRELPP51888 382 aa8.15□□□□□ -1.1
SEMA3D-204ENST00000484038 NFIXQ14938 502 aa8.15□□□□□ -1.1
SEMA3D-204ENST00000484038 TRIM22Q8IYM9 498 aa8.15□□□□□ -1.1
SEMA3D-204ENST00000484038 NUCKS1Q9H1E3 243 aaKnown RBP8.15□□□□□ -1.1
SEMA3D-204ENST00000484038 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.1
SEMA3D-204ENST00000484038 DKK1O94907 266 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 SERPINB2P05120 415 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 VSIG8P0DPA2 414 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 EPHA4P54764 986 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 LCE2CQ5TA81 110 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 FOXR1Q6PIV2 292 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 MORC1Q86VD1 984 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 C2CD5Q86YS7 1000 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 TTLL6Q8N841 843 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 PBXIP1Q96AQ6 731 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 ZNF837Q96EG3 531 aaPredicted RBP8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 PANK3Q9H999 370 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 CARMIL3Q8ND23 1372 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 CCDC88AQ3V6T2 1871 aa8.14□□□□□ -1.11
SEMA3D-204ENST00000484038 PPP1R12BO60237 982 aaPredicted RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 CYP19A1P11511 503 aaPredicted RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 FOXK2Q01167 660 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 SLC39A6Q13433 755 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 DBN1Q16643 649 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 ARSJQ5FYB0 599 aaPredicted RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 NANOS1Q8WY41 292 aaKnown RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 SLC52A2Q9HAB3 445 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 NARFQ9UHQ1 456 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 ZBTB1Q9Y2K1 713 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 VIRMAQ69YN4 1812 aaKnown RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 MRC1P22897 1456 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 SERTM1A2A2V5 107 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 H0YIN7 160 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 GPR25O00155 361 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 NFKBIEO00221 500 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 CANXP27824 592 aaKnown RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 PSMA6P60900 246 aaKnown RBP8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 EFHC2Q5JST6 749 aa8.13□□□□□ -1.11
SEMA3D-204ENST00000484038 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms