RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PNMA6AP0CW24 399 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 GFAPP14136 432 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 METAP2P50579 478 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 ANKRD42Q8N9B4 389 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 UIMC1Q96RL1 719 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 CCDC194A0A1B0GVG4 234 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 GJC2Q5T442 439 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 PYCARDQ9ULZ3 195 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 ATP6V0A2Q9Y487 856 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 TMPOP42166 694 aaKnown RBP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 APOBRQ0VD83 1088 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 PRPF38AQ8NAV1 312 aaKnown RBP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 NOX5Q96PH1 765 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 TSC22D4Q9Y3Q8 395 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 KIF21BO75037 1637 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 GAS8O95995 478 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 MTX1Q13505 466 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 PCDHB15Q9Y5E8 787 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 GJC1P36383 396 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 KLHL7Q8IXQ5 586 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 ESYT1Q9BSJ8 1104 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 PLCB3Q01970 1234 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 ZC3H18Q86VM9 953 aaKnown RBP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 CCDC68Q9H2F9 335 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 MCM7P33993 719 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 TTF1Q15361 905 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-207ENST00000483888 PIP4K2CQ8TBX8 421 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 FGD4Q96M96 766 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 SLC26A6Q9BXS9 759 aa11.43□□□□□ -0.58
COL12A1-207ENST00000483888 FBXO38Q6PIJ6 1188 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 SPINK5Q9NQ38 1064 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-207ENST00000483888 NDC80O14777 642 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 TRIM58Q8NG06 486 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 CCHCR1Q8TD31 782 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 DHX58Q96C10 678 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 CLSTN2Q9H4D0 955 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 A0A1B0GVL5 298 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 EVI5O60447 810 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 ANLNQ9NQW6 1124 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 CTNND2Q9UQB3 1225 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 IFIT3O14879 490 aaKnown RBP11.42□□□□□ -0.58
COL12A1-207ENST00000483888 SLC30A9Q6PML9 568 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 MICU3Q86XE3 530 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 GAS2L3Q86XJ1 694 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 SYCP3Q8IZU3 236 aa11.42□□□□□ -0.58
COL12A1-207ENST00000483888 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 IDH1O75874 414 aaKnown RBP11.41□□□□□ -0.58
COL12A1-207ENST00000483888 INPP1P49441 399 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 ACTN3Q08043 901 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-207ENST00000483888 SEPT2Q15019 361 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 PDZD8Q8NEN9 1154 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 PPP1R13BQ96KQ4 1090 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 HOMER3Q9NSC5 361 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 ACBD5Q5T8D3 534 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-207ENST00000483888 HIBCHQ6NVY1 386 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-207ENST00000483888 NME8Q8N427 588 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 PFDN4Q9NQP4 134 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 MAP3K1Q13233 1512 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 EEF1DP29692 281 aaKnown RBP11.41□□□□□ -0.58
COL12A1-207ENST00000483888 AK2P54819 239 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 NBPF3Q9H094 633 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 RUSC2Q8N2Y8 1516 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 TMTC1Q8IUR5 882 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 KIAA2013Q8IYS2 634 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 NAPBQ9H115 298 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 SLC4A7Q9Y6M7 1214 aa11.41□□□□□ -0.58
COL12A1-207ENST00000483888 KDM1AO60341 852 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 KIF6Q6ZMV9 814 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 GYS2P54840 703 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 NCBP1Q09161 790 aaKnown RBP11.4□□□□□ -0.58
COL12A1-207ENST00000483888 DYDC2Q96IM9 177 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 CCDC159P0C7I6 412 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 CCDC152Q4G0S7 254 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 KLHL29Q96CT2 875 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 KIF2CQ99661 725 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 KRT15P19012 456 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 Q6ZUG5 572 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 NBPF9Q3BBW0 867 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 BRF1Q92994 677 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 TTC41PQ6P2S7 1318 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 TRPA1O75762 1119 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 CATIPQ7Z7H3 387 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 LRRC27Q9C0I9 530 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 FAM169AQ9Y6X4 670 aa11.4□□□□□ -0.58
COL12A1-207ENST00000483888 SERPINI2O75830 405 aa11.4□□□□□ -0.59
COL12A1-207ENST00000483888 SCYL3Q8IZE3 742 aa11.4□□□□□ -0.59
COL12A1-207ENST00000483888 ADAM21Q9UKJ8 722 aa11.4□□□□□ -0.59
COL12A1-207ENST00000483888 MINDY4BA8MYZ0 360 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 GCFC2P16383 781 aaKnown RBP11.39□□□□□ -0.59
COL12A1-207ENST00000483888 ETF1P62495 437 aaKnown RBP11.39□□□□□ -0.59
COL12A1-207ENST00000483888 TRAF1Q13077 416 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 VPS16Q9H269 839 aa11.39□□□□□ -0.59
COL12A1-207ENST00000483888 ECM2O94769 699 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms