RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 IMMTQ16891 758 aaKnown RBP12.02□□□□□ -0.49
HDAC6-226ENST00000483656 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 SOGA3Q5TF21 947 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 STRIP1Q5VSL9 837 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 TBC1D10CQ8IV04 446 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 IL27Q8NEV9 243 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 ALDH8A1Q9H2A2 487 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-226ENST00000483656 ZNF277Q9NRM2 450 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-226ENST00000483656 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 DAXXQ9UER7 740 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-226ENST00000483656 SUGT1Q9Y2Z0 365 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 MROH7-TTC4A0A0A0MT08 1334 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 GAKO14976 1311 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 SMIM22K7EJ46 135 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 NFKBIEO00221 500 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 ZNF213O14771 459 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 MCM2P49736 904 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 EXOSC10Q01780 885 aaKnown RBP12.01□□□□□ -0.49
HDAC6-226ENST00000483656 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 SH3RF3Q8TEJ3 882 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-226ENST00000483656 TMX3Q96JJ7 454 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 TCEANC2Q96MN5 208 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 NAPBQ9H115 298 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 VPS33BQ9H267 617 aa12.01□□□□□ -0.49
HDAC6-226ENST00000483656 MYH2Q9UKX2 1941 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 USP17L3A6NCW0 530 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 USP17L4A6NCW7 530 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 BTDP43251 543 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 CTDSPL2Q05D32 466 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
HDAC6-226ENST00000483656 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
HDAC6-226ENST00000483656 CRNKL1Q9BZJ0 848 aaKnown RBP12□□□□□ -0.49
HDAC6-226ENST00000483656 NACAP1Q9BZK3 213 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 INCENPQ9NQS7 918 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 MKRN1Q9UHC7 482 aaKnown RBP12□□□□□ -0.49
HDAC6-226ENST00000483656 BCS1LQ9Y276 419 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 DAGLAQ9Y4D2 1042 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 LAMA4Q16363 1823 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 FER1L6Q2WGJ9 1857 aa12□□□□□ -0.49
HDAC6-226ENST00000483656 F8W031 263 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-226ENST00000483656 LARGE1O95461 756 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 DDIT3P35638 169 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
HDAC6-226ENST00000483656 TDO2P48775 406 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 PRELPP51888 382 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 RHBDL3P58872 404 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 EVX2Q03828 476 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 CUL4AQ13619 759 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 CTR9Q6PD62 1173 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
HDAC6-226ENST00000483656 DHX32Q7L7V1 743 aaKnown RBP11.99□□□□□ -0.49
HDAC6-226ENST00000483656 MB21D2Q8IYB1 491 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-226ENST00000483656 LARGE2Q8N3Y3 721 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 DCP1AQ9NPI6 582 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-226ENST00000483656 ANAPC4Q9UJX5 808 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 TTF2Q9UNY4 1162 aaKnown RBP11.99□□□□□ -0.49
HDAC6-226ENST00000483656 TIAM2Q8IVF5 1701 aa11.99□□□□□ -0.49
HDAC6-226ENST00000483656 CYP2D7A0A087X1C5 515 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 BAG3O95817 575 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 HMGB1P09429 215 aaKnown RBP11.98□□□□□ -0.49
HDAC6-226ENST00000483656 SCNN1DP51172 638 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 ANTXR2P58335 489 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 PPARAQ07869 468 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 MRIQ9BWK5 157 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 AGXT2Q9BYV1 514 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 TAOK3Q9H2K8 898 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 ATP8A2Q9NTI2 1148 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 LIMCH1Q9UPQ0 1083 aa11.98□□□□□ -0.49
HDAC6-226ENST00000483656 PSME4Q14997 1843 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 NEDD4P46934 1319 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 USP17L12C9JPN9 530 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 USP17L21D6R901 530 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 VIL1P09327 827 aaKnown RBP11.97□□□□□ -0.49
HDAC6-226ENST00000483656 CYP2D6P10635 497 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 SBK1Q52WX2 424 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 AKNAD1Q5T1N1 836 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
HDAC6-226ENST00000483656 HHIPL2Q6UWX4 724 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 Q6ZUG5 572 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 CYB5R4Q7L1T6 521 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 CHST3Q7LGC8 479 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 ZNF784Q8NCA9 323 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-226ENST00000483656 NCOA7Q8NI08 942 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 STAG1Q8WVM7 1258 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 GMLQ99445 158 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 NOL10Q9BSC4 688 aaKnown RBP11.97□□□□□ -0.49
HDAC6-226ENST00000483656 FHDC1Q9C0D6 1143 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-226ENST00000483656 SLKQ9H2G2 1235 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-226ENST00000483656 TPCN1Q9ULQ1 816 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms