RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 SP3Q02447 781 aa14.33□□□□□ -0.12
EPHB3-203ENST00000482987 NFIAQ12857 509 aa14.33□□□□□ -0.12
EPHB3-203ENST00000482987 CDC42EP5Q6NZY7 148 aa14.33□□□□□ -0.12
EPHB3-203ENST00000482987 MIGA2Q7L4E1 593 aa14.33□□□□□ -0.12
EPHB3-203ENST00000482987 COPRSQ9NQ92 184 aa14.33□□□□□ -0.12
EPHB3-203ENST00000482987 PTPN22Q9Y2R2 807 aa14.33□□□□□ -0.12
EPHB3-203ENST00000482987 CCER2I3L3R5 266 aa14.32□□□□□ -0.12
EPHB3-203ENST00000482987 INPP5BP32019 993 aa14.32□□□□□ -0.12
EPHB3-203ENST00000482987 TAF1CQ15572 869 aaPredicted RBP14.32□□□□□ -0.12
EPHB3-203ENST00000482987 ERO1BQ86YB8 467 aa14.32□□□□□ -0.12
EPHB3-203ENST00000482987 FAM151AQ8WW52 585 aa14.32□□□□□ -0.12
EPHB3-203ENST00000482987 EFCC1Q9HA90 598 aa14.32□□□□□ -0.12
EPHB3-203ENST00000482987 FAM198AQ9UFP1 575 aa14.32□□□□□ -0.12
EPHB3-203ENST00000482987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.32□□□□□ -0.12
EPHB3-203ENST00000482987 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
EPHB3-203ENST00000482987 POTEFA5A3E0 1075 aa14.31□□□□□ -0.12
EPHB3-203ENST00000482987 BTBD19C9JJ37 291 aa14.31□□□□□ -0.12
EPHB3-203ENST00000482987 TCP10Q12799 353 aa14.31□□□□□ -0.12
EPHB3-203ENST00000482987 CCDC102BQ68D86 513 aa14.31□□□□□ -0.12
EPHB3-203ENST00000482987 INTS3Q68E01 1043 aaKnown RBP14.31□□□□□ -0.12
EPHB3-203ENST00000482987 ZFPM1Q8IX07 1006 aa14.31□□□□□ -0.12
EPHB3-203ENST00000482987 TNNQ9UQP3 1299 aa14.31□□□□□ -0.12
EPHB3-203ENST00000482987 ZBTB22O15209 634 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 LDHBP07195 334 aaKnown RBP14.3□□□□□ -0.12
EPHB3-203ENST00000482987 TIMM10P62072 90 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 PPIL2Q13356 520 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 RASGRF1Q13972 1273 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 DCAF15Q66K64 600 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 ARHGAP45Q92619 1136 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 ARMC5Q96C12 935 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 ZNF341Q9BYN7 854 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 ZFYVE28Q9HCC9 887 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
EPHB3-203ENST00000482987 ZNF112Q9UJU3 913 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 DENND2AQ9ULE3 1009 aa14.3□□□□□ -0.12
EPHB3-203ENST00000482987 SEMA3EO15041 775 aa14.29□□□□□ -0.12
EPHB3-203ENST00000482987 CETPP11597 493 aa14.29□□□□□ -0.12
EPHB3-203ENST00000482987 SNAPC2Q13487 334 aa14.29□□□□□ -0.12
EPHB3-203ENST00000482987 MTX1Q13505 466 aa14.29□□□□□ -0.12
EPHB3-203ENST00000482987 PRPF38BQ5VTL8 546 aaKnown RBP14.29□□□□□ -0.12
EPHB3-203ENST00000482987 USP40Q9NVE5 1235 aa14.29□□□□□ -0.12
EPHB3-203ENST00000482987 ATRNL1Q5VV63 1379 aa14.29□□□□□ -0.12
EPHB3-203ENST00000482987 GAKO14976 1311 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 SRGAP3O43295 1099 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 TLR2O60603 784 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 TRIM27P14373 513 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 PPATQ06203 517 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 TFCP2Q12800 502 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 RFX7Q2KHR2 1363 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
EPHB3-203ENST00000482987 ARHGAP39Q9C0H5 1083 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 ZCCHC17Q9NP64 241 aaKnown RBP14.28□□□□□ -0.12
EPHB3-203ENST00000482987 HDAC5Q9UQL6 1122 aa14.28□□□□□ -0.12
EPHB3-203ENST00000482987 A0A1B0GUL7 405 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 BCAR3O75815 825 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 GNAI3P08754 354 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 MOGSQ13724 837 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 SH3BP5LQ7L8J4 393 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 ZNF384Q8TF68 577 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 XAGE2Q96GT9 111 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 KCNH4Q9UQ05 1017 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 PTCH2Q9Y6C5 1203 aa14.27□□□□□ -0.13
EPHB3-203ENST00000482987 PDS5AQ29RF7 1337 aaKnown RBP14.26□□□□□ -0.13
EPHB3-203ENST00000482987 SLURP2P0DP57 97 aa14.26□□□□□ -0.13
EPHB3-203ENST00000482987 LACTBP83111 547 aaPredicted RBP14.26□□□□□ -0.13
EPHB3-203ENST00000482987 NOL9Q5SY16 702 aaKnown RBP14.26□□□□□ -0.13
EPHB3-203ENST00000482987 ZNF333Q96JL9 665 aa14.26□□□□□ -0.13
EPHB3-203ENST00000482987 IDI2Q9BXS1 227 aa14.26□□□□□ -0.13
EPHB3-203ENST00000482987 DDX4Q9NQI0 724 aaKnown RBP14.26□□□□□ -0.13
EPHB3-203ENST00000482987 ADGRA2Q96PE1 1338 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 PNMA6EA0A0J9YXQ4 647 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 PHF20L1A8MW92 1017 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 WDHD1O75717 1129 aaPredicted RBP14.25□□□□□ -0.13
EPHB3-203ENST00000482987 EN2P19622 333 aaPredicted RBP14.25□□□□□ -0.13
EPHB3-203ENST00000482987 CTGFP29279 349 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 RGS3P49796 1198 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 C17orf99Q6UX52 265 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 PI16Q6UXB8 463 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 ATF7IPQ6VMQ6 1270 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 ZGPATQ8N5A5 531 aaKnown RBP14.25□□□□□ -0.13
EPHB3-203ENST00000482987 FAM163AQ96GL9 167 aaPredicted RBP14.25□□□□□ -0.13
EPHB3-203ENST00000482987 ABCF2Q9UG63 623 aa14.25□□□□□ -0.13
EPHB3-203ENST00000482987 DDTLA6NHG4 134 aaPredicted RBP14.24□□□□□ -0.13
EPHB3-203ENST00000482987 ENTPD3O75355 529 aa14.24□□□□□ -0.13
EPHB3-203ENST00000482987 ANKRD23Q86SG2 305 aa14.24□□□□□ -0.13
EPHB3-203ENST00000482987 DZIP1Q86YF9 867 aaKnown RBP14.24□□□□□ -0.13
EPHB3-203ENST00000482987 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
EPHB3-203ENST00000482987 CLUAP1Q96AJ1 413 aa14.24□□□□□ -0.13
EPHB3-203ENST00000482987 AKAP2Q9Y2D5 859 aa14.24□□□□□ -0.13
EPHB3-203ENST00000482987 MROH7-TTC4A0A0A0MT08 1334 aa14.23□□□□□ -0.13
EPHB3-203ENST00000482987 PDHXO00330 501 aa14.23□□□□□ -0.13
EPHB3-203ENST00000482987 ECM2O94769 699 aaPredicted RBP14.23□□□□□ -0.13
EPHB3-203ENST00000482987 BTDP43251 543 aa14.23□□□□□ -0.13
EPHB3-203ENST00000482987 RHBDL3P58872 404 aa14.23□□□□□ -0.13
EPHB3-203ENST00000482987 MAP3K10Q02779 954 aa14.23□□□□□ -0.13
EPHB3-203ENST00000482987 MECOMQ03112 1051 aa14.23□□□□□ -0.13
EPHB3-203ENST00000482987 MVPQ14764 893 aaKnown RBP14.23□□□□□ -0.13
EPHB3-203ENST00000482987 SLC9C1Q4G0N8 1177 aa14.23□□□□□ -0.13
EPHB3-203ENST00000482987 GPAT2Q6NUI2 795 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms