RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 BNC2Q6ZN30 1099 aaPredicted RBP5.41□□□□□ -1.54
CLCC1-209ENST00000482889 CCDC81Q6ZN84 652 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 CD163Q86VB7 1156 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 WFDC8Q8IUA0 241 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 FAM169BQ8N8A8 192 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 GPATCH3Q96I76 525 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 SPACA7Q96KW9 195 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 POP1Q99575 1024 aaKnown RBP5.41□□□□□ -1.54
CLCC1-209ENST00000482889 SPOCK3Q9BQ16 436 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 RASSF4Q9H2L5 321 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 PPM1HQ9ULR3 514 aa5.41□□□□□ -1.54
CLCC1-209ENST00000482889 C1QTNF9BB2RNN3 333 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 APBA3O96018 575 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 F13A1P00488 732 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 SSBP05455 408 aaKnown RBP eCLIP5.4□□□□□ -1.54
CLCC1-209ENST00000482889 CANXP27824 592 aaKnown RBP5.4□□□□□ -1.54
CLCC1-209ENST00000482889 CHRNA4P43681 627 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 LMNB2Q03252 620 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 AGMOQ6ZNB7 445 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 FMR1NBQ8N0W7 255 aaPredicted RBP5.4□□□□□ -1.54
CLCC1-209ENST00000482889 SHDQ96IW2 340 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 PSMG3-AS1Q96PY0 264 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 BHLHE41Q9C0J9 482 aaPredicted RBP5.4□□□□□ -1.54
CLCC1-209ENST00000482889 ZNF576Q9H609 170 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 PPT2Q9UMR5 302 aa5.4□□□□□ -1.54
CLCC1-209ENST00000482889 TMA7Q9Y2S6 64 aaKnown RBP5.4□□□□□ -1.54
CLCC1-209ENST00000482889 FAM229AH3BQW9 127 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 ADAM23O75077 832 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 XRCC5P13010 732 aaKnown RBP5.39□□□□□ -1.55
CLCC1-209ENST00000482889 CDK11BP21127 795 aaKnown RBP5.39□□□□□ -1.55
CLCC1-209ENST00000482889 BAG6P46379 1132 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 PTPN11Q06124 597 aaPredicted RBP5.39□□□□□ -1.55
CLCC1-209ENST00000482889 PWP1Q13610 501 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 ZNF423Q2M1K9 1284 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 SOGA3Q5TF21 947 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 PCNX4Q63HM2 1172 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 TTBK2Q6IQ55 1244 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 SLITRK4Q8IW52 837 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 DMRTC2Q8IXT2 367 aaPredicted RBP5.39□□□□□ -1.55
CLCC1-209ENST00000482889 CELF2-AS1Q8N7Q2 184 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 TMEM102Q8N9M5 508 aaPredicted RBP5.39□□□□□ -1.55
CLCC1-209ENST00000482889 GRIN3AQ8TCU5 1115 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 NKD1Q969G9 470 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 ANAPC16Q96DE5 110 aa5.39□□□□□ -1.55
CLCC1-209ENST00000482889 RNPC3Q96LT9 517 aaKnown RBP5.39□□□□□ -1.55
CLCC1-209ENST00000482889 SUPT16HQ9Y5B9 1047 aaKnown RBP5.39□□□□□ -1.55
CLCC1-209ENST00000482889 FAM221AA4D161 298 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
CLCC1-209ENST00000482889 C9orf172C9J069 976 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 PDE2AO00408 941 aaPredicted RBP5.38□□□□□ -1.55
CLCC1-209ENST00000482889 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
CLCC1-209ENST00000482889 SMNDC1O75940 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
CLCC1-209ENST00000482889 CDK8P49336 464 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 RAB33AQ14088 237 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 SEZ6Q53EL9 994 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 FAM196AQ6ZSG2 479 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 FBXO11Q86XK2 927 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 MAP4K3Q8IVH8 894 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 CKAP2LQ8IYA6 745 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 ASAP3Q8TDY4 903 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 MICAL1Q8TDZ2 1067 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 DCAF11Q8TEB1 546 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 JARID2Q92833 1246 aaPredicted RBP5.38□□□□□ -1.55
CLCC1-209ENST00000482889 PBX4Q9BYU1 374 aa5.38□□□□□ -1.55
CLCC1-209ENST00000482889 SELPP16109 830 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 NRG1Q02297 640 aaPredicted RBP5.37□□□□□ -1.55
CLCC1-209ENST00000482889 CLCQ05315 142 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 APOBRQ0VD83 1088 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 SEPT6Q14141 434 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 RASA3Q14644 834 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 GRIK4Q16099 956 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 SNAP47Q5SQN1 464 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 HGSNATQ68CP4 663 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 LILRB2Q8N423 598 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 LENG1Q96BZ8 264 aaPredicted RBP5.37□□□□□ -1.55
CLCC1-209ENST00000482889 SRRTQ9BXP5 876 aaKnown RBP5.37□□□□□ -1.55
CLCC1-209ENST00000482889 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 TNKS2Q9H2K2 1166 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 SNTG2Q9NY99 539 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 TRIM33Q9UPN9 1127 aa5.37□□□□□ -1.55
CLCC1-209ENST00000482889 ADGRE1Q14246 886 aa5.36□□□□□ -1.55
CLCC1-209ENST00000482889 CEP135Q66GS9 1140 aa5.36□□□□□ -1.55
CLCC1-209ENST00000482889 GDF6Q6KF10 455 aaPredicted RBP5.36□□□□□ -1.55
CLCC1-209ENST00000482889 VN1R5Q7Z5H4 357 aa5.36□□□□□ -1.55
CLCC1-209ENST00000482889 TRIM42Q8IWZ5 723 aa5.36□□□□□ -1.55
CLCC1-209ENST00000482889 MKL1Q969V6 931 aa5.36□□□□□ -1.55
CLCC1-209ENST00000482889 ADAM19Q9H013 955 aa5.36□□□□□ -1.55
CLCC1-209ENST00000482889 ST7Q9NRC1 585 aa5.36□□□□□ -1.55
CLCC1-209ENST00000482889 GPN3Q9UHW5 284 aaPredicted RBP5.36□□□□□ -1.55
CLCC1-209ENST00000482889 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
CLCC1-209ENST00000482889 CCDC85CA6NKD9 419 aa5.35□□□□□ -1.55
CLCC1-209ENST00000482889 DLL1O00548 723 aa5.35□□□□□ -1.55
CLCC1-209ENST00000482889 DEAF1O75398 565 aaPredicted RBP5.35□□□□□ -1.55
CLCC1-209ENST00000482889 PTPRAP18433 802 aa5.35□□□□□ -1.55
CLCC1-209ENST00000482889 CDC27P30260 824 aa5.35□□□□□ -1.55
CLCC1-209ENST00000482889 GATA4P43694 442 aa5.35□□□□□ -1.55
CLCC1-209ENST00000482889 NBPF6Q5VWK0 638 aa5.35□□□□□ -1.55
CLCC1-209ENST00000482889 IGF2-ASQ6U949 168 aa5.35□□□□□ -1.55
CLCC1-209ENST00000482889 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.35□□□□□ -1.55
CLCC1-209ENST00000482889 IL22RA1Q8N6P7 574 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms