RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 SF3A1Q15459 793 aaKnown RBP17.65■□□□□ 0.42
DDR1-244ENST00000482873 NCOA7Q8NI08 942 aa17.65■□□□□ 0.42
DDR1-244ENST00000482873 OSBPL5Q9H0X9 879 aaPredicted RBP17.65■□□□□ 0.42
DDR1-244ENST00000482873 L2HGDHQ9H9P8 463 aa17.65■□□□□ 0.42
DDR1-244ENST00000482873 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.42
DDR1-244ENST00000482873 NUP188Q5SRE5 1749 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 BIN1O00499 593 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 TRIM28Q13263 835 aaKnown RBP17.64■□□□□ 0.41
DDR1-244ENST00000482873 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 CCDC66A2RUB6 948 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 EXOC5O00471 708 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 PDE8BO95263 885 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 H2AFXP16104 143 aaPredicted RBP17.64■□□□□ 0.41
DDR1-244ENST00000482873 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
DDR1-244ENST00000482873 GSDMDP57764 484 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 CTDSPL2Q05D32 466 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 SYT10Q6XYQ8 523 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 TOMM22Q9NS69 142 aa17.64■□□□□ 0.41
DDR1-244ENST00000482873 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
DDR1-244ENST00000482873 PPP1R13BQ96KQ4 1090 aa17.63■□□□□ 0.41
DDR1-244ENST00000482873 ZKSCAN3Q9BRR0 538 aa17.63■□□□□ 0.41
DDR1-244ENST00000482873 TEX13AQ9BXU3 409 aaPredicted RBP17.63■□□□□ 0.41
DDR1-244ENST00000482873 KIF2AO00139 706 aaPredicted RBP17.63■□□□□ 0.41
DDR1-244ENST00000482873 ADD2P35612 726 aa17.63■□□□□ 0.41
DDR1-244ENST00000482873 ARMCX5Q6P1M9 558 aa17.63■□□□□ 0.41
DDR1-244ENST00000482873 SDF4Q9BRK5 362 aa17.63■□□□□ 0.41
DDR1-244ENST00000482873 PARP4Q9UKK3 1724 aaKnown RBP17.63■□□□□ 0.41
DDR1-244ENST00000482873 PRKAB2O43741 272 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 ZFYP08048 801 aaPredicted RBP17.62■□□□□ 0.41
DDR1-244ENST00000482873 NDUFA8P51970 172 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 STK38Q15208 465 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 TRDNQ13061 729 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 CCDC93Q567U6 631 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
DDR1-244ENST00000482873 MAGEB6Q8N7X4 407 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 ZNF396Q96N95 335 aaPredicted RBP17.62■□□□□ 0.41
DDR1-244ENST00000482873 XPO4Q9C0E2 1151 aaKnown RBP17.62■□□□□ 0.41
DDR1-244ENST00000482873 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.62■□□□□ 0.412e-7■■■□□ 17.5
DDR1-244ENST00000482873 ARMT1Q9H993 441 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 FHOD1Q9Y613 1164 aa17.62■□□□□ 0.41
DDR1-244ENST00000482873 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 PDE6AP16499 860 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 CLCN6P51797 869 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 DPCR1Q3MIW9 517 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 VGLL2Q8N8G2 317 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.61■□□□□ 0.41
DDR1-244ENST00000482873 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 SMIM22K7EJ46 135 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 CDC27P30260 824 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 BCAMP50895 628 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
DDR1-244ENST00000482873 NFXL1Q6ZNB6 911 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 FMR1NBQ8N0W7 255 aaPredicted RBP17.61■□□□□ 0.41
DDR1-244ENST00000482873 AIDAQ96BJ3 306 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 NAT10Q9H0A0 1025 aaKnown RBP17.61■□□□□ 0.41
DDR1-244ENST00000482873 IMPACTQ9P2X3 320 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 MYH15Q9Y2K3 1946 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 ABCC6O95255 1503 aa17.61■□□□□ 0.41
DDR1-244ENST00000482873 UBR2Q8IWV8 1755 aa17.6■□□□□ 0.41
DDR1-244ENST00000482873 NEDD4P46934 1319 aa17.6■□□□□ 0.41
DDR1-244ENST00000482873 BMS1Q14692 1282 aaKnown RBP17.6■□□□□ 0.41
DDR1-244ENST00000482873 TMC6Q7Z403 805 aa17.6■□□□□ 0.41
DDR1-244ENST00000482873 IFNKQ9P0W0 207 aa17.6■□□□□ 0.41
DDR1-244ENST00000482873 PDE8AO60658 829 aa17.6■□□□□ 0.41
DDR1-244ENST00000482873 SMC2O95347 1197 aa17.6■□□□□ 0.41
DDR1-244ENST00000482873 IRX5P78411 483 aaPredicted RBP17.59■□□□□ 0.41
DDR1-244ENST00000482873 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
DDR1-244ENST00000482873 FBXO18Q8NFZ0 1043 aa17.59■□□□□ 0.41
DDR1-244ENST00000482873 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
DDR1-244ENST00000482873 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
DDR1-244ENST00000482873 MBD4O95243 580 aa17.59■□□□□ 0.41
DDR1-244ENST00000482873 ATP6V1AP38606 617 aa17.59■□□□□ 0.41
DDR1-244ENST00000482873 TIGD1Q96MW7 591 aa17.59■□□□□ 0.41
DDR1-244ENST00000482873 TACC3Q9Y6A5 838 aa17.59■□□□□ 0.41
DDR1-244ENST00000482873 SFPQP23246 707 aaKnown RBP eCLIP17.58■□□□□ 0.41
DDR1-244ENST00000482873 METAP2P50579 478 aaKnown RBP eCLIP17.58■□□□□ 0.416e-6■■■■□ 24.8
DDR1-244ENST00000482873 ARHGAP29Q52LW3 1261 aa17.58■□□□□ 0.41
DDR1-244ENST00000482873 LINC00301Q8NCQ3 95 aa17.58■□□□□ 0.41
DDR1-244ENST00000482873 MRPS27Q92552 414 aaKnown RBP17.58■□□□□ 0.41
DDR1-244ENST00000482873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.58■□□□□ 0.41
DDR1-244ENST00000482873 SHANK3Q9BYB0 1731 aa17.58■□□□□ 0.4
DDR1-244ENST00000482873 PSDA5PKW4 1024 aaPredicted RBP17.58■□□□□ 0.4
DDR1-244ENST00000482873 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.4
DDR1-244ENST00000482873 NUTM2BA6NNL0 878 aaPredicted RBP17.57■□□□□ 0.4
DDR1-244ENST00000482873 NUTM2EB1AL46 878 aaPredicted RBP17.57■□□□□ 0.4
DDR1-244ENST00000482873 PNMA6AP0CW24 399 aaPredicted RBP17.57■□□□□ 0.4
DDR1-244ENST00000482873 GNL2Q13823 731 aaKnown RBP17.57■□□□□ 0.4
DDR1-244ENST00000482873 MYSM1Q5VVJ2 828 aa17.57■□□□□ 0.4
DDR1-244ENST00000482873 SYNE3Q6ZMZ3 975 aa17.57■□□□□ 0.4
DDR1-244ENST00000482873 NUTM2AQ8IVF1 878 aaPredicted RBP17.57■□□□□ 0.4
DDR1-244ENST00000482873 SPATA5Q8NB90 893 aa17.57■□□□□ 0.4
DDR1-244ENST00000482873 ALG1Q9BT22 464 aa17.57■□□□□ 0.4
DDR1-244ENST00000482873 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
DDR1-244ENST00000482873 SPECC1Q5M775 1068 aa17.57■□□□□ 0.4
DDR1-244ENST00000482873 ATL3Q6DD88 541 aa17.57■□□□□ 0.4
DDR1-244ENST00000482873 CCDC150Q8NCX0 1101 aa17.57■□□□□ 0.4
DDR1-244ENST00000482873 EPB41L4AQ9HCS5 686 aaPredicted RBP17.57■□□□□ 0.4
DDR1-244ENST00000482873 ANGEL1Q9UNK9 670 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms