RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 PUF60Q9UHX1 559 aaKnown RBP12.66□□□□□ -0.38
RPGR-208ENST00000482855 RAB21Q9UL25 225 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 N4BP1O75113 896 aaKnown RBP12.66□□□□□ -0.38
RPGR-208ENST00000482855 ATP5JP18859 108 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 ATP2B1P20020 1258 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 SYKP43405 635 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 EXOSC10Q01780 885 aaKnown RBP12.66□□□□□ -0.38
RPGR-208ENST00000482855 OTUD7BQ6GQQ9 843 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 BRAPQ7Z569 592 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 DESI2Q9BSY9 194 aa12.66□□□□□ -0.38
RPGR-208ENST00000482855 KDM3BQ7LBC6 1761 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 ATRNO75882 1429 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
RPGR-208ENST00000482855 FDPSP14324 419 aaKnown RBP12.65□□□□□ -0.38
RPGR-208ENST00000482855 TBX2Q13207 712 aaPredicted RBP12.65□□□□□ -0.38
RPGR-208ENST00000482855 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 MSANTD4Q8NCY6 345 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 FAM71BQ8TC56 605 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 KAZALD1Q96I82 304 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 MROH7-TTC4A0A0A0MT08 1334 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 ADKP55263 362 aaKnown RBP12.65□□□□□ -0.38
RPGR-208ENST00000482855 TUBB4BP68371 445 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
RPGR-208ENST00000482855 AXDND1Q5T1B0 1012 aaPredicted RBP12.65□□□□□ -0.38
RPGR-208ENST00000482855 ANO1Q5XXA6 986 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 TC2NQ8N9U0 490 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 PNKPQ96T60 521 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 ACBD3Q9H3P7 528 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 ABCB6Q9NP58 842 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 INTS13Q9NVM9 706 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 AKAP2Q9Y2D5 859 aa12.65□□□□□ -0.38
RPGR-208ENST00000482855 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 CHGBP05060 677 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 CCDC175P0C221 793 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 ZNF772Q68DY9 489 aaPredicted RBP12.64□□□□□ -0.39
RPGR-208ENST00000482855 SPECC1LQ69YQ0 1117 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 LRRC31Q6UY01 552 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 CNNM3Q8NE01 707 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 KLHDC4Q8TBB5 520 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
RPGR-208ENST00000482855 GBP3Q9H0R5 595 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 CDC23Q9UJX2 597 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 KCNQ3O43525 872 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
RPGR-208ENST00000482855 LINS1Q8NG48 757 aa12.64□□□□□ -0.39
RPGR-208ENST00000482855 COL18A1P39060 1754 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 PNOCQ13519 176 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 CASP8Q14790 479 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 MRPL44Q9H9J2 332 aaKnown RBP12.63□□□□□ -0.39
RPGR-208ENST00000482855 SUGCTQ9HAC7 445 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 MRC1P22897 1456 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 CPDO75976 1380 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 KIF5CO60282 957 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 PHACTR2O75167 634 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 HOXC9P31274 260 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 WWC2Q6AWC2 1192 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
RPGR-208ENST00000482855 IRX2Q9BZI1 471 aaPredicted RBP12.63□□□□□ -0.39
RPGR-208ENST00000482855 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
RPGR-208ENST00000482855 UTYO14607 1347 aa12.63□□□□□ -0.39
RPGR-208ENST00000482855 E7EWF7 191 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 MARCKSP29966 332 aaPredicted RBP12.62□□□□□ -0.39
RPGR-208ENST00000482855 HSP90AA4PQ58FG1 418 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 ORAI2Q96SN7 254 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 LZTFL1Q9NQ48 299 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 ANKRD65E5RJM6 399 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 PPFIA4O75335 1185 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
RPGR-208ENST00000482855 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
RPGR-208ENST00000482855 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 FAM204AQ9H8W3 233 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
RPGR-208ENST00000482855 CPP00450 1065 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 RHOXF2BP0C7M4 288 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
RPGR-208ENST00000482855 RHOXF2Q9BQY4 288 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 VSNL1P62760 191 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 MTF1Q14872 753 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 PROSER3Q2NL68 480 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 KIF4BQ2VIQ3 1234 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 TNNI3KQ59H18 835 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 MMS22LQ6ZRQ5 1243 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 USHBP1Q8N6Y0 703 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 JMYQ8N9B5 988 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 DSCC1Q9BVC3 393 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms