RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 BTDP43251 543 aa20.19■□□□□ 0.82
HMGN1-214ENST00000482733 MAP3K12Q12852 859 aa20.19■□□□□ 0.82
HMGN1-214ENST00000482733 NOL10Q9BSC4 688 aaKnown RBP20.19■□□□□ 0.82
HMGN1-214ENST00000482733 MKRN1Q9UHC7 482 aaKnown RBP20.19■□□□□ 0.82
HMGN1-214ENST00000482733 TRPM7Q96QT4 1865 aa20.19■□□□□ 0.82
HMGN1-214ENST00000482733 IDH1O75874 414 aaKnown RBP20.18■□□□□ 0.82
HMGN1-214ENST00000482733 ECE1P42892 770 aa20.18■□□□□ 0.82
HMGN1-214ENST00000482733 HUNKP57058 714 aa20.18■□□□□ 0.82
HMGN1-214ENST00000482733 ANKRD45Q5TZF3 282 aa20.18■□□□□ 0.82
HMGN1-214ENST00000482733 ZNF384Q8TF68 577 aa20.18■□□□□ 0.82
HMGN1-214ENST00000482733 DNAJC2Q99543 621 aaKnown RBP20.18■□□□□ 0.82
HMGN1-214ENST00000482733 HAUS7Q99871 368 aa20.18■□□□□ 0.82
HMGN1-214ENST00000482733 ECM29Q5VYK3 1845 aa20.18■□□□□ 0.82
HMGN1-214ENST00000482733 POLR2AP24928 1970 aaKnown RBP20.17■□□□□ 0.82
HMGN1-214ENST00000482733 PPP1R12BO60237 982 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-214ENST00000482733 BAG3O95817 575 aa20.17■□□□□ 0.82
HMGN1-214ENST00000482733 CACNB3P54284 484 aa20.17■□□□□ 0.82
HMGN1-214ENST00000482733 TTLL12Q14166 644 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-214ENST00000482733 ARMC9Q7Z3E5 817 aa20.17■□□□□ 0.82
HMGN1-214ENST00000482733 SMC5Q8IY18 1101 aa20.17■□□□□ 0.82
HMGN1-214ENST00000482733 BOLA2Q9H3K6 86 aa20.17■□□□□ 0.82
HMGN1-214ENST00000482733 ANTXR1Q9H6X2 564 aa20.17■□□□□ 0.82
HMGN1-214ENST00000482733 NDUFB9Q9Y6M9 179 aa20.17■□□□□ 0.82
HMGN1-214ENST00000482733 AKAP11Q9UKA4 1901 aa20.16■□□□□ 0.82
HMGN1-214ENST00000482733 GOLIM4O00461 696 aa20.16■□□□□ 0.82
HMGN1-214ENST00000482733 PAXIP1Q6ZW49 1069 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-214ENST00000482733 FAM151AQ8WW52 585 aa20.16■□□□□ 0.82
HMGN1-214ENST00000482733 HOOK2Q96ED9 719 aa20.16■□□□□ 0.82
HMGN1-214ENST00000482733 IDI2Q9BXS1 227 aa20.16■□□□□ 0.82
HMGN1-214ENST00000482733 TMEM39BQ9GZU3 492 aa20.16■□□□□ 0.82
HMGN1-214ENST00000482733 PAG1Q9NWQ8 432 aa20.16■□□□□ 0.82
HMGN1-214ENST00000482733 TTC41PQ6P2S7 1318 aa20.16■□□□□ 0.82
HMGN1-214ENST00000482733 ENTPD3O75355 529 aa20.15■□□□□ 0.82
HMGN1-214ENST00000482733 IGHDP01880 384 aa20.15■□□□□ 0.82
HMGN1-214ENST00000482733 PLCG2P16885 1265 aa20.15■□□□□ 0.82
HMGN1-214ENST00000482733 NBPF12Q5TAG4 269 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-214ENST00000482733 CERS3Q8IU89 383 aa20.15■□□□□ 0.82
HMGN1-214ENST00000482733 TEPSINQ96N21 525 aa20.15■□□□□ 0.82
HMGN1-214ENST00000482733 RPAP1Q9BWH6 1393 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-214ENST00000482733 ERC2O15083 957 aa20.14■□□□□ 0.81
HMGN1-214ENST00000482733 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
HMGN1-214ENST00000482733 CYP7A1P22680 504 aa20.14■□□□□ 0.81
HMGN1-214ENST00000482733 VEGFBP49765 207 aa20.14■□□□□ 0.81
HMGN1-214ENST00000482733 RHBDL3P58872 404 aa20.14■□□□□ 0.81
HMGN1-214ENST00000482733 PPP4CP60510 307 aa20.14■□□□□ 0.81
HMGN1-214ENST00000482733 RGMBQ6NW40 437 aa20.14■□□□□ 0.81
HMGN1-214ENST00000482733 MAGEB6Q8N7X4 407 aa20.14■□□□□ 0.81
HMGN1-214ENST00000482733 PAPPA2Q9BXP8 1791 aa20.13■□□□□ 0.81
HMGN1-214ENST00000482733 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
HMGN1-214ENST00000482733 UNCXA6NJT0 531 aa20.13■□□□□ 0.81
HMGN1-214ENST00000482733 NFIAQ12857 509 aa20.13■□□□□ 0.81
HMGN1-214ENST00000482733 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
HMGN1-214ENST00000482733 JMYQ8N9B5 988 aa20.13■□□□□ 0.81
HMGN1-214ENST00000482733 CCDC102AQ96A19 550 aa20.13■□□□□ 0.81
HMGN1-214ENST00000482733 CAPNS2Q96L46 248 aa20.13■□□□□ 0.81
HMGN1-214ENST00000482733 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.13■□□□□ 0.81
HMGN1-214ENST00000482733 FAM198AQ9UFP1 575 aa20.13■□□□□ 0.81
HMGN1-214ENST00000482733 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-214ENST00000482733 GLRX3O76003 335 aaKnown RBP20.12■□□□□ 0.81
HMGN1-214ENST00000482733 MX1P20591 662 aa20.12■□□□□ 0.81
HMGN1-214ENST00000482733 IREB2P48200 963 aaKnown RBP20.12■□□□□ 0.81
HMGN1-214ENST00000482733 RGS3P49796 1198 aa20.12■□□□□ 0.81
HMGN1-214ENST00000482733 SLC9C2Q5TAH2 1124 aa20.12■□□□□ 0.81
HMGN1-214ENST00000482733 CYP4F22Q6NT55 531 aa20.12■□□□□ 0.81
HMGN1-214ENST00000482733 AATFQ9NY61 560 aaKnown RBP eCLIP20.12■□□□□ 0.81
HMGN1-214ENST00000482733 ANGEL1Q9UNK9 670 aaKnown RBP20.12■□□□□ 0.81
HMGN1-214ENST00000482733 RFX7Q2KHR2 1363 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 UBE2Q2LH0YL09 131 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 ZNF157P51786 506 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-214ENST00000482733 TCP10Q12799 353 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 PRKG1Q13976 671 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 MOB2Q70IA6 237 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 TEX11Q8IYF3 940 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 SSC5DA1L4H1 1573 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 MYH2Q9UKX2 1941 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 MAST2Q6P0Q8 1798 aa20.11■□□□□ 0.81
HMGN1-214ENST00000482733 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-214ENST00000482733 PDE6AP16499 860 aa20.1■□□□□ 0.81
HMGN1-214ENST00000482733 NUCB1Q02818 461 aa20.1■□□□□ 0.81
HMGN1-214ENST00000482733 LDLRAD1Q5T700 205 aa20.1■□□□□ 0.81
HMGN1-214ENST00000482733 DCAF15Q66K64 600 aa20.1■□□□□ 0.81
HMGN1-214ENST00000482733 B4GALNT3Q6L9W6 998 aa20.1■□□□□ 0.81
HMGN1-214ENST00000482733 ZSCAN25Q6NSZ9 544 aa20.1■□□□□ 0.81
HMGN1-214ENST00000482733 ADGRA1Q86SQ6 560 aa20.1■□□□□ 0.81
HMGN1-214ENST00000482733 EDC3Q96F86 508 aaKnown RBP20.1■□□□□ 0.81
HMGN1-214ENST00000482733 SALL3Q9BXA9 1300 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 USP2O75604 605 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-214ENST00000482733 MAP2K2P36507 400 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 NOGQ13253 232 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 GRM1Q13255 1194 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 PICALMQ13492 652 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 TSHZ3Q63HK5 1081 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 CHD1LQ86WJ1 897 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 OTUD7AQ8TE49 926 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-214ENST00000482733 SH3RF3Q8TEJ3 882 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-214ENST00000482733 LNPKQ9C0E8 428 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 STAP2Q9UGK3 403 aa20.09■□□□□ 0.81
HMGN1-214ENST00000482733 PI4K2BQ8TCG2 481 aa20.08■□□□□ 0.81
HMGN1-214ENST00000482733 DDX4Q9NQI0 724 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms