RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 MCMDC2Q4G0Z9 681 aa27.74■■■□□ 2.03
SHISA4-203ENST00000481699 SAMD7Q7Z3H4 446 aa27.74■■■□□ 2.03
SHISA4-203ENST00000481699 MTMR14Q8NCE2 650 aa27.74■■■□□ 2.03
SHISA4-203ENST00000481699 OSBP2Q969R2 916 aa27.74■■■□□ 2.03
SHISA4-203ENST00000481699 MYH7P12883 1935 aa27.73■■■□□ 2.03
SHISA4-203ENST00000481699 A0A0D9SFI3 127 aa27.73■■■□□ 2.03
SHISA4-203ENST00000481699 SPDYE2BA6NHP3 402 aa27.73■■■□□ 2.03
SHISA4-203ENST00000481699 MBD4O95243 580 aa27.73■■■□□ 2.03
SHISA4-203ENST00000481699 SPDYE6P0CI01 402 aa27.73■■■□□ 2.03
SHISA4-203ENST00000481699 PUS7LQ9H0K6 701 aaKnown RBP27.73■■■□□ 2.03
SHISA4-203ENST00000481699 TMOD2Q9NZR1 351 aa27.73■■■□□ 2.03
SHISA4-203ENST00000481699 EPHX2P34913 555 aa27.72■■■□□ 2.03
SHISA4-203ENST00000481699 USP40Q9NVE5 1235 aa27.72■■■□□ 2.03
SHISA4-203ENST00000481699 RAD50Q92878 1312 aa27.71■■■□□ 2.03
SHISA4-203ENST00000481699 M0R2C6 588 aa27.71■■■□□ 2.03
SHISA4-203ENST00000481699 KIF3CO14782 793 aa27.71■■■□□ 2.03
SHISA4-203ENST00000481699 PPP4CP60510 307 aa27.71■■■□□ 2.03
SHISA4-203ENST00000481699 DYNLL1P63167 89 aaKnown RBP27.71■■■□□ 2.03
SHISA4-203ENST00000481699 APOBEC3HQ6NTF7 200 aaKnown RBP27.71■■■□□ 2.03
SHISA4-203ENST00000481699 SEC62Q99442 399 aaKnown RBP27.71■■■□□ 2.03
SHISA4-203ENST00000481699 CRNKL1Q9BZJ0 848 aaKnown RBP27.71■■■□□ 2.03
SHISA4-203ENST00000481699 ARMT1Q9H993 441 aa27.71■■■□□ 2.03
SHISA4-203ENST00000481699 MYH2Q9UKX2 1941 aa27.71■■■□□ 2.03
SHISA4-203ENST00000481699 GPAA1O43292 621 aa27.7■■■□□ 2.02
SHISA4-203ENST00000481699 TEX11Q8IYF3 940 aa27.7■■■□□ 2.02
SHISA4-203ENST00000481699 PRMT6Q96LA8 375 aaPredicted RBP27.7■■■□□ 2.02
SHISA4-203ENST00000481699 PCDHAC2Q9Y5I4 1007 aa27.7■■■□□ 2.02
SHISA4-203ENST00000481699 VEGFAP15692 232 aaPredicted RBP27.69■■■□□ 2.02
SHISA4-203ENST00000481699 USP50Q70EL3 339 aaPredicted RBP27.69■■■□□ 2.02
SHISA4-203ENST00000481699 LCORLQ8N3X6 602 aa27.69■■■□□ 2.02
SHISA4-203ENST00000481699 TRPM4Q8TD43 1214 aa27.69■■■□□ 2.02
SHISA4-203ENST00000481699 SH3RF3Q8TEJ3 882 aaPredicted RBP27.69■■■□□ 2.02
SHISA4-203ENST00000481699 TDRD3Q9H7E2 651 aaKnown RBP27.69■■■□□ 2.02
SHISA4-203ENST00000481699 RRAGCQ9HB90 399 aa27.69■■■□□ 2.02
SHISA4-203ENST00000481699 WDR90Q96KV7 1748 aa27.68■■■□□ 2.02
SHISA4-203ENST00000481699 WNT10BO00744 389 aa27.68■■■□□ 2.02
SHISA4-203ENST00000481699 EIF5BO60841 1220 aaKnown RBP27.68■■■□□ 2.02
SHISA4-203ENST00000481699 GNAT2P19087 354 aa27.68■■■□□ 2.02
SHISA4-203ENST00000481699 CDC42EP5Q6NZY7 148 aa27.68■■■□□ 2.02
SHISA4-203ENST00000481699 CCDC129Q6ZRS4 1044 aa27.68■■■□□ 2.02
SHISA4-203ENST00000481699 KIAA1211Q6ZU35 1233 aa27.68■■■□□ 2.02
SHISA4-203ENST00000481699 DDRGK1Q96HY6 314 aa27.68■■■□□ 2.02
SHISA4-203ENST00000481699 RIOK1Q9BRS2 568 aaKnown RBP27.68■■■□□ 2.02
SHISA4-203ENST00000481699 ESYT1Q9BSJ8 1104 aa27.68■■■□□ 2.02
SHISA4-203ENST00000481699 TAF1DQ9H5J8 278 aaPredicted RBP27.68■■■□□ 2.02
SHISA4-203ENST00000481699 CCDC171Q6TFL3 1326 aa27.67■■■□□ 2.02
SHISA4-203ENST00000481699 EGFRP00533 1210 aa27.67■■■□□ 2.02
SHISA4-203ENST00000481699 USP5P45974 858 aa27.67■■■□□ 2.02
SHISA4-203ENST00000481699 NBPF9Q3BBW0 867 aa27.67■■■□□ 2.02
SHISA4-203ENST00000481699 EAPPQ56P03 285 aaPredicted RBP27.67■■■□□ 2.02
SHISA4-203ENST00000481699 PNMA8AQ86V59 439 aaPredicted RBP27.67■■■□□ 2.02
SHISA4-203ENST00000481699 VEZTQ9HBM0 779 aa27.67■■■□□ 2.02
SHISA4-203ENST00000481699 SLC4A4Q9Y6R1 1079 aa27.67■■■□□ 2.02
SHISA4-203ENST00000481699 ADAMTSL1Q8N6G6 1762 aa27.66■■■□□ 2.02
SHISA4-203ENST00000481699 CLRN2A0PK11 232 aa27.66■■■□□ 2.02
SHISA4-203ENST00000481699 APPP05067 770 aa27.66■■■□□ 2.02
SHISA4-203ENST00000481699 ZBED3Q96IU2 234 aaPredicted RBP27.66■■■□□ 2.02
SHISA4-203ENST00000481699 STRBPQ96SI9 672 aaKnown RBP27.66■■■□□ 2.02
SHISA4-203ENST00000481699 ZNF70Q9UC06 446 aaPredicted RBP27.66■■■□□ 2.02
SHISA4-203ENST00000481699 SGSM2O43147 1006 aa27.65■■■□□ 2.02
SHISA4-203ENST00000481699 SCN4AP35499 1836 aa27.64■■■□□ 2.02
SHISA4-203ENST00000481699 RHBDL3P58872 404 aa27.64■■■□□ 2.02
SHISA4-203ENST00000481699 SPDYE2Q495Y8 402 aa27.64■■■□□ 2.02
SHISA4-203ENST00000481699 ZNF589Q86UQ0 364 aaPredicted RBP27.64■■■□□ 2.02
SHISA4-203ENST00000481699 NACAP1Q9BZK3 213 aa27.64■■■□□ 2.02
SHISA4-203ENST00000481699 POTECB2RU33 542 aa27.63■■■□□ 2.01
SHISA4-203ENST00000481699 TGFBRAP1Q8WUH2 860 aa27.63■■■□□ 2.01
SHISA4-203ENST00000481699 NMRK2Q9NPI5 230 aa27.63■■■□□ 2.01
SHISA4-203ENST00000481699 TNNI2P48788 182 aa27.62■■■□□ 2.01
SHISA4-203ENST00000481699 PICALMQ13492 652 aa27.62■■■□□ 2.01
SHISA4-203ENST00000481699 ANO2Q9NQ90 1003 aa27.62■■■□□ 2.01
SHISA4-203ENST00000481699 CLEC11AQ9Y240 323 aa27.62■■■□□ 2.01
SHISA4-203ENST00000481699 REC8O95072 547 aa27.61■■■□□ 2.01
SHISA4-203ENST00000481699 HIRAP54198 1017 aaPredicted RBP27.61■■■□□ 2.01
SHISA4-203ENST00000481699 CACNB3P54284 484 aa27.61■■■□□ 2.01
SHISA4-203ENST00000481699 TNFAIP1Q13829 316 aa27.61■■■□□ 2.01
SHISA4-203ENST00000481699 ANGEL2Q5VTE6 544 aaKnown RBP27.61■■■□□ 2.01
SHISA4-203ENST00000481699 APOBEC3FQ8IUX4 373 aaKnown RBP27.61■■■□□ 2.01
SHISA4-203ENST00000481699 DCPSQ96C86 337 aaKnown RBP27.61■■■□□ 2.01
SHISA4-203ENST00000481699 ATP8A2Q9NTI2 1148 aa27.61■■■□□ 2.01
SHISA4-203ENST00000481699 GGA3Q9NZ52 723 aa27.61■■■□□ 2.01
SHISA4-203ENST00000481699 TCP10L2B9ZVM9 353 aa27.6■■■□□ 2.01
SHISA4-203ENST00000481699 PATL2C9JE40 543 aaKnown RBP27.6■■■□□ 2.01
SHISA4-203ENST00000481699 PRKAB2O43741 272 aa27.6■■■□□ 2.01
SHISA4-203ENST00000481699 TDO2P48775 406 aa27.6■■■□□ 2.01
SHISA4-203ENST00000481699 MAPKAPK5Q8IW41 473 aa27.6■■■□□ 2.01
SHISA4-203ENST00000481699 AMOTL1Q8IY63 956 aa27.6■■■□□ 2.01
SHISA4-203ENST00000481699 ZC3H15Q8WU90 426 aaKnown RBP27.6■■■□□ 2.01
SHISA4-203ENST00000481699 SDR42E1Q8WUS8 393 aa27.6■■■□□ 2.01
SHISA4-203ENST00000481699 RPAP1Q9BWH6 1393 aaPredicted RBP27.6■■■□□ 2.01
SHISA4-203ENST00000481699 WDHD1O75717 1129 aaPredicted RBP27.59■■■□□ 2.01
SHISA4-203ENST00000481699 FKBP1CQ5VVH2 108 aa27.59■■■□□ 2.01
SHISA4-203ENST00000481699 IDI2Q9BXS1 227 aa27.59■■■□□ 2.01
SHISA4-203ENST00000481699 IL25Q9H293 177 aa27.59■■■□□ 2.01
SHISA4-203ENST00000481699 APLP1P51693 650 aa27.58■■■□□ 2.01
SHISA4-203ENST00000481699 ASTN2O75129 1339 aaPredicted RBP27.58■■■□□ 2.01
SHISA4-203ENST00000481699 HSPD1P10809 573 aaKnown RBP27.57■■■□□ 2
SHISA4-203ENST00000481699 TCP10Q12799 353 aa27.57■■■□□ 2
SHISA4-203ENST00000481699 NFIAQ12857 509 aa27.57■■■□□ 2
SHISA4-203ENST00000481699 C8orf34Q49A92 452 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms