RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 MAST2Q6P0Q8 1798 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 MYH7P12883 1935 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 COL4A5P29400 1685 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 H7C1D1 291 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 RAD17O75943 681 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 PCP11498 1178 aaKnown RBP9.88□□□□□ -0.83
SYNE1-225ENST00000481502 MCCP23508 829 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 CRKP46108 304 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 TSGA10IPQ3SY00 556 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 RNF20Q5VTR2 975 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 FBXW7Q969H0 707 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 IDI2Q9BXS1 227 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 USP26Q9BXU7 913 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 SCN9AQ15858 1988 aa9.88□□□□□ -0.83
SYNE1-225ENST00000481502 GLTPD2A6NH11 291 aa9.87□□□□□ -0.83
SYNE1-225ENST00000481502 MYO1BO43795 1136 aa9.87□□□□□ -0.83
SYNE1-225ENST00000481502 HSPD1P10809 573 aaKnown RBP9.87□□□□□ -0.83
SYNE1-225ENST00000481502 RBM25P49756 843 aaKnown RBP9.87□□□□□ -0.83
SYNE1-225ENST00000481502 DLGAP5Q15398 846 aa9.87□□□□□ -0.83
SYNE1-225ENST00000481502 APOBEC3HQ6NTF7 200 aaKnown RBP9.87□□□□□ -0.83
SYNE1-225ENST00000481502 KIAA0825Q8IV33 1275 aa9.87□□□□□ -0.83
SYNE1-225ENST00000481502 KCNB2Q92953 911 aa9.87□□□□□ -0.83
SYNE1-225ENST00000481502 ZBED3Q96IU2 234 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-225ENST00000481502 LSG1Q9H089 658 aaKnown RBP9.87□□□□□ -0.83
SYNE1-225ENST00000481502 ANO2Q9NQ90 1003 aa9.87□□□□□ -0.83
SYNE1-225ENST00000481502 DAGLAQ9Y4D2 1042 aa9.87□□□□□ -0.83
SYNE1-225ENST00000481502 IQCA1LA6NCM1 817 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 SPDYE2BA6NHP3 402 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 ENTPD3O75355 529 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 MBD4O95243 580 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 SPDYE6P0CI01 402 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 ZKSCAN1P17029 563 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-225ENST00000481502 LMOD1P29536 600 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-225ENST00000481502 HSPA4P34932 840 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 BTDP43251 543 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 RHBDL3P58872 404 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 KRT32Q14532 448 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 NECTIN1Q15223 517 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 CFAP100Q494V2 611 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 SBK1Q52WX2 424 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 DHX36Q9H2U1 1008 aaKnown RBP9.86□□□□□ -0.83
SYNE1-225ENST00000481502 MYOZ2Q9NPC6 264 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 GPRC5DQ9NZD1 345 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 MKRN1Q9UHC7 482 aaKnown RBP9.86□□□□□ -0.83
SYNE1-225ENST00000481502 CNOT7Q9UIV1 285 aaKnown RBP9.86□□□□□ -0.83
SYNE1-225ENST00000481502 JAG2Q9Y219 1238 aa9.86□□□□□ -0.83
SYNE1-225ENST00000481502 ZNF646O15015 1829 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-225ENST00000481502 GSG1L2A8MUP6 293 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 M0R2C6 588 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 GMPSP49915 693 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-225ENST00000481502 TNFAIP1Q13829 316 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 GRIK5Q16478 980 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 ADGRA1Q86SQ6 560 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 ZNF589Q86UQ0 364 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-225ENST00000481502 FAM83AQ86UY5 434 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 AMOTL1Q8IY63 956 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 IFNL3Q8IZI9 196 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 LCORLQ8N3X6 602 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 ZC3H15Q8WU90 426 aaKnown RBP9.85□□□□□ -0.83
SYNE1-225ENST00000481502 SEC62Q99442 399 aaKnown RBP9.85□□□□□ -0.83
SYNE1-225ENST00000481502 ZNF287Q9HBT7 754 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 AATFQ9NY61 560 aaKnown RBP eCLIP9.85□□□□□ -0.83
SYNE1-225ENST00000481502 TMOD2Q9NZR1 351 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 ARPP21Q9UBL0 812 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-225ENST00000481502 ANAPC4Q9UJX5 808 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 SLC4A4Q9Y6R1 1079 aa9.85□□□□□ -0.83
SYNE1-225ENST00000481502 COL2A1P02458 1487 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-225ENST00000481502 ZNF541Q9H0D2 1346 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 FGAP02671 866 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 SLC3A2P08195 630 aaKnown RBP9.84□□□□□ -0.83
SYNE1-225ENST00000481502 SCNN1DP51172 638 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 IMMTQ16891 758 aaKnown RBP9.84□□□□□ -0.83
SYNE1-225ENST00000481502 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 CDC42EP5Q6NZY7 148 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 USP50Q70EL3 339 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-225ENST00000481502 TTC6Q86TZ1 520 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 PNMA8AQ86V59 439 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-225ENST00000481502 TEX11Q8IYF3 940 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 MTA3Q9BTC8 594 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 C22orf23Q9BZE7 217 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 TM6SF1Q9BZW5 370 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 NAPBQ9H115 298 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 ARMT1Q9H993 441 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 DCP1AQ9NPI6 582 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-225ENST00000481502 ADARB2Q9NS39 739 aaKnown RBP9.84□□□□□ -0.83
SYNE1-225ENST00000481502 USP40Q9NVE5 1235 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 ZBTB12Q9Y330 459 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-225ENST00000481502 PPP2R3BQ9Y5P8 575 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 GJA3Q9Y6H8 435 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 MYH2Q9UKX2 1941 aa9.84□□□□□ -0.83
SYNE1-225ENST00000481502 PITPNM2Q9BZ72 1349 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 MYO5AQ9Y4I1 1855 aaKnown RBP9.83□□□□□ -0.84
SYNE1-225ENST00000481502 F8W031 263 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-225ENST00000481502 WNT10BO00744 389 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 ZNF213O14771 459 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 APPP05067 770 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 HMGB1P09429 215 aaKnown RBP9.83□□□□□ -0.84
SYNE1-225ENST00000481502 FGRP09769 529 aa9.83□□□□□ -0.84
SYNE1-225ENST00000481502 PSMA5P28066 241 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms