RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 SHISA5Q8N114 240 aa6.37□□□□□ -1.39
CBX3-207ENST00000481300 FAM161BQ96MY7 647 aa6.37□□□□□ -1.39
CBX3-207ENST00000481300 KRTAP4-12Q9BQ66 201 aa6.37□□□□□ -1.39
CBX3-207ENST00000481300 UNCXA6NJT0 531 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 F13BP05160 661 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 EIF4BP23588 611 aaKnown RBP6.36□□□□□ -1.39
CBX3-207ENST00000481300 MAOBP27338 520 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 RXRBP28702 533 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 GP2P55259 537 aaKnown RBP6.36□□□□□ -1.39
CBX3-207ENST00000481300 DAB2P98082 770 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 SOX4Q06945 474 aaPredicted RBP6.36□□□□□ -1.39
CBX3-207ENST00000481300 TMC4Q7Z404 712 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 FBLIM1Q8WUP2 373 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 TRIM56Q9BRZ2 755 aaKnown RBP6.36□□□□□ -1.39
CBX3-207ENST00000481300 VTI1BQ9UEU0 232 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 TRAK1Q9UPV9 953 aa6.36□□□□□ -1.39
CBX3-207ENST00000481300 COL17A1Q9UMD9 1497 aaPredicted RBP6.35□□□□□ -1.39
CBX3-207ENST00000481300 FAM95CA0A1B0GW59 222 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 ECEL1O95672 775 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 ADH5P11766 374 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 FBXL6Q8N531 539 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 SRCIN1Q9C0H9 1055 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 ZNF576Q9H609 170 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 C12orf49Q9H741 205 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 RNF19AQ9NV58 838 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 PIM2Q9P1W9 311 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 AK5Q9Y6K8 562 aa6.35□□□□□ -1.39
CBX3-207ENST00000481300 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
CBX3-207ENST00000481300 B3GALT4O96024 378 aa6.34□□□□□ -1.39
CBX3-207ENST00000481300 ITPKAP23677 461 aa6.34□□□□□ -1.39
CBX3-207ENST00000481300 USP11P51784 963 aa6.34□□□□□ -1.39
CBX3-207ENST00000481300 GRM2Q14416 872 aa6.34□□□□□ -1.39
CBX3-207ENST00000481300 POU4F3Q15319 338 aa6.34□□□□□ -1.39
CBX3-207ENST00000481300 NFKBIBQ15653 356 aa6.34□□□□□ -1.39
CBX3-207ENST00000481300 NXPE4Q6UWF7 544 aa6.34□□□□□ -1.39
CBX3-207ENST00000481300 EZH1Q92800 747 aaPredicted RBP6.34□□□□□ -1.39
CBX3-207ENST00000481300 ACTL7BQ9Y614 415 aa6.34□□□□□ -1.39
CBX3-207ENST00000481300 CYP11A1P05108 521 aa6.33□□□□□ -1.4
CBX3-207ENST00000481300 ADMP35318 185 aa6.33□□□□□ -1.4
CBX3-207ENST00000481300 RANGAP1P46060 587 aaPredicted RBP6.33□□□□□ -1.4
CBX3-207ENST00000481300 PAOXQ6QHF9 649 aa6.33□□□□□ -1.4
CBX3-207ENST00000481300 OSBPL7Q9BZF2 842 aa6.33□□□□□ -1.4
CBX3-207ENST00000481300 ABCB6Q9NP58 842 aa6.33□□□□□ -1.4
CBX3-207ENST00000481300 FAM8A1Q9UBU6 413 aa6.33□□□□□ -1.4
CBX3-207ENST00000481300 VAMP1P23763 118 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 GSTT1P30711 240 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 IRAK1P51617 712 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 MSMPQ1L6U9 139 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 TSNAXIP1Q2TAA8 658 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 GATA6Q92908 595 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 ATG3Q9NT62 314 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 KIAA1522Q9P206 1035 aaPredicted RBP6.32□□□□□ -1.4
CBX3-207ENST00000481300 PRKAG2Q9UGJ0 569 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 LEMD3Q9Y2U8 911 aa6.32□□□□□ -1.4
CBX3-207ENST00000481300 WNT11O96014 354 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 USP17L7P0C7H9 530 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 FOSL1P15407 271 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 FCGRTP55899 365 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 MRPL58Q14197 206 aaKnown RBP6.31□□□□□ -1.4
CBX3-207ENST00000481300 AKAP4Q5JQC9 854 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 PRPF40BQ6NWY9 871 aaKnown RBP6.31□□□□□ -1.4
CBX3-207ENST00000481300 DTHD1Q6ZMT9 781 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 ZAR1Q86SH2 424 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 KRTAP1-3Q8IUG1 177 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 GIMAP7Q8NHV1 300 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 CRELD1Q96HD1 420 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 OSBPL1AQ9BXW6 950 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
CBX3-207ENST00000481300 TMEM238LA0A1B0GVL6 79 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 NFICP08651 508 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
CBX3-207ENST00000481300 RAB6AP20340 208 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 PTPN12Q05209 780 aaKnown RBP6.3□□□□□ -1.4
CBX3-207ENST00000481300 CPSF6Q16630 551 aaKnown RBP eCLIP6.3□□□□□ -1.4
CBX3-207ENST00000481300 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 TMEM87AQ8NBN3 555 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 GLIS3Q8NEA6 775 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 TBC1D32Q96NH3 1257 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 CORO1BQ9BR76 489 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 YIPF2Q9BWQ6 316 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 BACH2Q9BYV9 841 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 SEMA6CQ9H3T2 930 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 GSX1Q9H4S2 264 aaPredicted RBP6.3□□□□□ -1.4
CBX3-207ENST00000481300 ACSS3Q9H6R3 686 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 ZFYVE1Q9HBF4 777 aa6.3□□□□□ -1.4
CBX3-207ENST00000481300 FAM170BA6NMN3 283 aa6.29□□□□□ -1.4
CBX3-207ENST00000481300 TAL1P17542 331 aaPredicted RBP6.29□□□□□ -1.4
CBX3-207ENST00000481300 FAAP100Q0VG06 881 aa6.29□□□□□ -1.4
CBX3-207ENST00000481300 HP1BP3Q5SSJ5 553 aaPredicted RBP6.29□□□□□ -1.4
CBX3-207ENST00000481300 NFXL1Q6ZNB6 911 aa6.29□□□□□ -1.4
CBX3-207ENST00000481300 DYMQ7RTS9 669 aa6.29□□□□□ -1.4
CBX3-207ENST00000481300 WDR18Q9BV38 432 aa6.29□□□□□ -1.4
CBX3-207ENST00000481300 RAD18Q9NS91 495 aa6.29□□□□□ -1.4
CBX3-207ENST00000481300 AP4E1Q9UPM8 1137 aa6.29□□□□□ -1.4
CBX3-207ENST00000481300 AKAP2Q9Y2D5 859 aa6.29□□□□□ -1.4
CBX3-207ENST00000481300 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.28□□□□□ -1.4
CBX3-207ENST00000481300 DYNC1LI2O43237 492 aaPredicted RBP6.28□□□□□ -1.4
CBX3-207ENST00000481300 AOC2O75106 756 aa6.28□□□□□ -1.4
CBX3-207ENST00000481300 RECKO95980 971 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms