RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ANO10Q9NW15 660 aa22.2■■□□□ 1.14
CCM2-214ENST00000481194 RAB11FIP4Q86YS3 637 aa22.2■■□□□ 1.14
CCM2-214ENST00000481194 NAP1L4Q99733 375 aaKnown RBP22.2■■□□□ 1.14
CCM2-214ENST00000481194 RPAP1Q9BWH6 1393 aaPredicted RBP22.2■■□□□ 1.14
CCM2-214ENST00000481194 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
CCM2-214ENST00000481194 PPARAQ07869 468 aa22.2■■□□□ 1.14
CCM2-214ENST00000481194 KDM6AO15550 1401 aaPredicted RBP22.19■■□□□ 1.14
CCM2-214ENST00000481194 SAP30BPQ9UHR5 308 aaKnown RBP22.19■■□□□ 1.14
CCM2-214ENST00000481194 TBC1D9BQ66K14 1250 aa22.19■■□□□ 1.14
CCM2-214ENST00000481194 TLR7Q9NYK1 1049 aaKnown RBP22.19■■□□□ 1.14
CCM2-214ENST00000481194 SMARCE1Q969G3 411 aa22.19■■□□□ 1.14
CCM2-214ENST00000481194 TTF2Q9UNY4 1162 aaKnown RBP22.19■■□□□ 1.14
CCM2-214ENST00000481194 NDUFB9Q9Y6M9 179 aa22.19■■□□□ 1.14
CCM2-214ENST00000481194 DLGAP5Q15398 846 aa22.19■■□□□ 1.14
CCM2-214ENST00000481194 ZNF34Q8IZ26 560 aa22.19■■□□□ 1.14
CCM2-214ENST00000481194 ARHGEF10LQ9HCE6 1279 aa22.19■■□□□ 1.14
CCM2-214ENST00000481194 E7EWF7 191 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 GNA11P29992 359 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 R3HCC1Q9Y3T6 440 aaKnown RBP22.18■■□□□ 1.14
CCM2-214ENST00000481194 KRT2P35908 639 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 NAPAP54920 295 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 IFNL3Q8IZI9 196 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 FSIP1Q8NA03 581 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 ABCC6O95255 1503 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 UTYO14607 1347 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 EPHA10Q5JZY3 1008 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 HEATR3Q7Z4Q2 680 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 CALML4Q96GE6 196 aa22.18■■□□□ 1.14
CCM2-214ENST00000481194 MMP10P09238 476 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 HSPD1P10809 573 aaKnown RBP22.17■■□□□ 1.14
CCM2-214ENST00000481194 AMPD3Q01432 767 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 TNFAIP1Q13829 316 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 CCDC93Q567U6 631 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 GLT8D2Q9H1C3 349 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 ATP8A2Q9NTI2 1148 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 GJA3Q9Y6H8 435 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 PXDNQ92626 1479 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 FOXO4P98177 505 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 RAB3GAP1Q15042 981 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 HOMER1Q86YM7 354 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 IGSF3O75054 1194 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 DEXIO95424 95 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 KIF20AO95235 890 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 RTKN2Q8IZC4 609 aa22.17■■□□□ 1.14
CCM2-214ENST00000481194 TTLL5Q6EMB2 1281 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 EDC3Q96F86 508 aaKnown RBP22.16■■□□□ 1.14
CCM2-214ENST00000481194 CAMTA2O94983 1202 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 ADD2P35612 726 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 CHST3Q7LGC8 479 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 RGL2O15211 777 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 CCP110O43303 1012 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 CAVIN2O95810 425 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 LSG1Q9H089 658 aaKnown RBP22.16■■□□□ 1.14
CCM2-214ENST00000481194 RBM26Q5T8P6 1007 aaKnown RBP22.16■■□□□ 1.14
CCM2-214ENST00000481194 MAP4K1Q92918 833 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 NALCNQ8IZF0 1738 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 WWC2Q6AWC2 1192 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 PI4K2BQ8TCG2 481 aa22.16■■□□□ 1.14
CCM2-214ENST00000481194 KLHL40Q2TBA0 621 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 USP40Q9NVE5 1235 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 SSBP05455 408 aaKnown RBP eCLIP22.15■■□□□ 1.14
CCM2-214ENST00000481194 COA1Q9GZY4 146 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 PIK3C2AO00443 1686 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 TGFBRAP1Q8WUH2 860 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 MED23Q9ULK4 1368 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 SERPINC1P01008 464 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 PDIA6Q15084 440 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 LINC00116Q8NCU8 138 aa22.15■■□□□ 1.14
CCM2-214ENST00000481194 MED1Q15648 1581 aaPredicted RBP22.15■■□□□ 1.14
CCM2-214ENST00000481194 GRPEL1Q9HAV7 217 aa22.14■■□□□ 1.14
CCM2-214ENST00000481194 RTN4Q9NQC3 1192 aaKnown RBP22.14■■□□□ 1.14
CCM2-214ENST00000481194 CNNM3Q8NE01 707 aa22.14■■□□□ 1.13
CCM2-214ENST00000481194 ZSWIM6Q9HCJ5 1215 aa22.14■■□□□ 1.13
CCM2-214ENST00000481194 ZNF274Q96GC6 653 aaPredicted RBP22.13■■□□□ 1.13
CCM2-214ENST00000481194 ZHX3Q9H4I2 956 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 CTDSPL2Q05D32 466 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 ERMNQ8TAM6 284 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 BCS1LQ9Y276 419 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 TMEM132AQ24JP5 1023 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 MAPKAPK5Q8IW41 473 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 NFAT5O94916 1531 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 SHPRHQ149N8 1683 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 B4DLN1 442 aa22.13■■□□□ 1.13
CCM2-214ENST00000481194 MRPL12P52815 198 aaKnown RBP22.13■■□□□ 1.13
CCM2-214ENST00000481194 BTDP43251 543 aa22.12■■□□□ 1.13
CCM2-214ENST00000481194 H7C1D1 291 aa22.12■■□□□ 1.13
CCM2-214ENST00000481194 PTH1RQ03431 593 aa22.12■■□□□ 1.13
CCM2-214ENST00000481194 TFIP11Q9UBB9 837 aaKnown RBP22.12■■□□□ 1.13
CCM2-214ENST00000481194 TRIM75PA6NK02 468 aa22.12■■□□□ 1.13
CCM2-214ENST00000481194 CLEC11AQ9Y240 323 aa22.11■■□□□ 1.13
CCM2-214ENST00000481194 UBA7P41226 1012 aa22.11■■□□□ 1.13
CCM2-214ENST00000481194 SF3B3Q15393 1217 aaKnown RBP22.11■■□□□ 1.13
CCM2-214ENST00000481194 PICK1Q9NRD5 415 aa22.11■■□□□ 1.13
CCM2-214ENST00000481194 SYCE3A1L190 88 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 FGFR1OPO95684 399 aaKnown RBP22.1■■□□□ 1.13
CCM2-214ENST00000481194 SMARCC2Q8TAQ2 1214 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 FNBP4Q8N3X1 1017 aaPredicted RBP22.1■■□□□ 1.13
CCM2-214ENST00000481194 BRIP1Q9BX63 1249 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 TTLL6Q8N841 843 aa22.1■■□□□ 1.13
CCM2-214ENST00000481194 TSG101Q99816 390 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms