RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 DEAF1O75398 565 aaPredicted RBP13.77□□□□□ -0.21
CUL3-209ENST00000481135 PRRT3Q5FWE3 981 aa13.77□□□□□ -0.21
CUL3-209ENST00000481135 BEND7Q8N7W2 519 aaPredicted RBP13.77□□□□□ -0.21
CUL3-209ENST00000481135 NRSN2Q9GZP1 204 aa13.77□□□□□ -0.21
CUL3-209ENST00000481135 PCDHB5Q9Y5E4 795 aa13.77□□□□□ -0.21
CUL3-209ENST00000481135 INSM1Q01101 510 aaPredicted RBP13.76□□□□□ -0.21
CUL3-209ENST00000481135 PDE3AQ14432 1141 aa13.76□□□□□ -0.21
CUL3-209ENST00000481135 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
CUL3-209ENST00000481135 JARID2Q92833 1246 aaPredicted RBP13.76□□□□□ -0.21
CUL3-209ENST00000481135 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
CUL3-209ENST00000481135 ZC3H12CQ9C0D7 883 aaKnown RBP13.76□□□□□ -0.21
CUL3-209ENST00000481135 GREM1O60565 184 aa13.75□□□□□ -0.21
CUL3-209ENST00000481135 GARTP22102 1010 aa13.75□□□□□ -0.21
CUL3-209ENST00000481135 ARID5AQ03989 594 aa13.75□□□□□ -0.21
CUL3-209ENST00000481135 FAM196AQ6ZSG2 479 aa13.75□□□□□ -0.21
CUL3-209ENST00000481135 GATAD2BQ8WXI9 593 aa13.75□□□□□ -0.21
CUL3-209ENST00000481135 BPNT1O95861 308 aa13.74□□□□□ -0.21
CUL3-209ENST00000481135 RASGRP4Q8TDF6 673 aa13.74□□□□□ -0.21
CUL3-209ENST00000481135 DLL1O00548 723 aa13.73□□□□□ -0.21
CUL3-209ENST00000481135 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
CUL3-209ENST00000481135 SEPT6Q14141 434 aa13.73□□□□□ -0.21
CUL3-209ENST00000481135 DUOXA2Q1HG44 320 aa13.73□□□□□ -0.21
CUL3-209ENST00000481135 FOXD4L6Q3SYB3 417 aaPredicted RBP13.73□□□□□ -0.21
CUL3-209ENST00000481135 FOXD4L3Q6VB84 417 aaPredicted RBP13.73□□□□□ -0.21
CUL3-209ENST00000481135 EAF1Q96JC9 268 aaPredicted RBP13.73□□□□□ -0.21
CUL3-209ENST00000481135 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
CUL3-209ENST00000481135 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
CUL3-209ENST00000481135 LOC100289279A0A1B0GTE1 492 aa13.72□□□□□ -0.21
CUL3-209ENST00000481135 TM4SF5O14894 197 aa13.72□□□□□ -0.21
CUL3-209ENST00000481135 DDX3YO15523 660 aaKnown RBP13.72□□□□□ -0.21
CUL3-209ENST00000481135 ELNP15502 786 aa13.72□□□□□ -0.21
CUL3-209ENST00000481135 DNAJA1P31689 397 aaKnown RBP13.72□□□□□ -0.21
CUL3-209ENST00000481135 BNC2Q6ZN30 1099 aaPredicted RBP13.72□□□□□ -0.21
CUL3-209ENST00000481135 ADAM11O75078 769 aa13.71□□□□□ -0.21
CUL3-209ENST00000481135 F13A1P00488 732 aa13.71□□□□□ -0.21
CUL3-209ENST00000481135 COL9A2Q14055 689 aaPredicted RBP13.71□□□□□ -0.21
CUL3-209ENST00000481135 MPP2Q14168 576 aa13.71□□□□□ -0.21
CUL3-209ENST00000481135 IGF2-ASQ6U949 168 aa13.71□□□□□ -0.21
CUL3-209ENST00000481135 NKD1Q969G9 470 aa13.71□□□□□ -0.21
CUL3-209ENST00000481135 TANGO6Q9C0B7 1094 aa13.71□□□□□ -0.21
CUL3-209ENST00000481135 CCDC86Q9H6F5 360 aaKnown RBP13.71□□□□□ -0.21
CUL3-209ENST00000481135 CWF19L2Q2TBE0 894 aaKnown RBP13.7□□□□□ -0.22
CUL3-209ENST00000481135 GPBAR1Q8TDU6 330 aa13.7□□□□□ -0.22
CUL3-209ENST00000481135 GAL3ST3Q96A11 431 aa13.7□□□□□ -0.22
CUL3-209ENST00000481135 SEC16BQ96JE7 1060 aa13.7□□□□□ -0.22
CUL3-209ENST00000481135 GMLQ99445 158 aa13.7□□□□□ -0.22
CUL3-209ENST00000481135 RAD18Q9NS91 495 aa13.7□□□□□ -0.22
CUL3-209ENST00000481135 CACNA2D2Q9NY47 1150 aa13.7□□□□□ -0.22
CUL3-209ENST00000481135 KCNK4Q9NYG8 393 aa13.7□□□□□ -0.22
CUL3-209ENST00000481135 PCDHA4Q9UN74 947 aa13.7□□□□□ -0.22
CUL3-209ENST00000481135 CILPO75339 1184 aa13.69□□□□□ -0.22
CUL3-209ENST00000481135 ECEL1O95672 775 aa13.69□□□□□ -0.22
CUL3-209ENST00000481135 SLFN14P0C7P3 912 aa13.69□□□□□ -0.22
CUL3-209ENST00000481135 EXOSC6Q5RKV6 272 aaKnown RBP13.69□□□□□ -0.22
CUL3-209ENST00000481135 SCARF2Q96GP6 870 aaPredicted RBP13.69□□□□□ -0.22
CUL3-209ENST00000481135 LRRC3Q9BY71 257 aa13.69□□□□□ -0.22
CUL3-209ENST00000481135 UBP1Q9NZI7 540 aa13.69□□□□□ -0.22
CUL3-209ENST00000481135 PRKAG2Q9UGJ0 569 aa13.69□□□□□ -0.22
CUL3-209ENST00000481135 ADAMTS8Q9UP79 889 aa13.69□□□□□ -0.22
CUL3-209ENST00000481135 FAM221AA4D161 298 aa13.68□□□□□ -0.22
CUL3-209ENST00000481135 RPL6Q02878 288 aaKnown RBP13.68□□□□□ -0.22
CUL3-209ENST00000481135 MRPL18Q9H0U6 180 aaKnown RBP13.68□□□□□ -0.22
CUL3-209ENST00000481135 ATF4P18848 351 aaPredicted RBP13.67□□□□□ -0.22
CUL3-209ENST00000481135 UBASH3BQ8TF42 649 aa13.67□□□□□ -0.22
CUL3-209ENST00000481135 RUSC1Q9BVN2 902 aa13.67□□□□□ -0.22
CUL3-209ENST00000481135 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
CUL3-209ENST00000481135 TLR3O15455 904 aaKnown RBP13.66□□□□□ -0.22
CUL3-209ENST00000481135 CTSBP07858 339 aa13.66□□□□□ -0.22
CUL3-209ENST00000481135 LIG1P18858 919 aa13.66□□□□□ -0.22
CUL3-209ENST00000481135 ATP2B1P20020 1258 aa13.66□□□□□ -0.22
CUL3-209ENST00000481135 LORP23490 312 aaPredicted RBP13.66□□□□□ -0.22
CUL3-209ENST00000481135 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
CUL3-209ENST00000481135 MPRIPQ6WCQ1 1025 aa13.66□□□□□ -0.22
CUL3-209ENST00000481135 SNCAIPQ9Y6H5 919 aa13.66□□□□□ -0.22
CUL3-209ENST00000481135 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 FAM229AH3BQW9 127 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 ZNF862O60290 1169 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 SPATA31C1P0DKV0 1188 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 SEZ6Q53EL9 994 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 ACAD11Q709F0 780 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 HDXQ7Z353 690 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 SLITRK4Q8IW52 837 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.65□□□□□ -0.22
CUL3-209ENST00000481135 RNF208Q9H0X6 261 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 EFR3BQ9Y2G0 817 aa13.65□□□□□ -0.22
CUL3-209ENST00000481135 MEGF11A6BM72 1044 aa13.64□□□□□ -0.23
CUL3-209ENST00000481135 PTPN11Q06124 597 aaPredicted RBP13.64□□□□□ -0.23
CUL3-209ENST00000481135 REC114Q7Z4M0 266 aa13.64□□□□□ -0.23
CUL3-209ENST00000481135 CYP4F12Q9HCS2 524 aa13.64□□□□□ -0.23
CUL3-209ENST00000481135 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
CUL3-209ENST00000481135 FAM181BA6NEQ2 426 aa13.63□□□□□ -0.23
CUL3-209ENST00000481135 AOC2O75106 756 aa13.63□□□□□ -0.23
CUL3-209ENST00000481135 CRKP46108 304 aa13.63□□□□□ -0.23
CUL3-209ENST00000481135 ZNF165P49910 485 aa13.63□□□□□ -0.23
CUL3-209ENST00000481135 NUTM2GQ5VZR2 741 aa13.63□□□□□ -0.23
CUL3-209ENST00000481135 ELMO3Q96BJ8 720 aa13.63□□□□□ -0.23
CUL3-209ENST00000481135 NACC1Q96RE7 527 aa13.63□□□□□ -0.23
CUL3-209ENST00000481135 STRIP2Q9ULQ0 834 aa13.63□□□□□ -0.23
CUL3-209ENST00000481135 MCM4P33991 863 aa13.62□□□□□ -0.23
CUL3-209ENST00000481135 FBXO27Q8NI29 283 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms