RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 USP31Q70CQ4 1352 aa8.98□□□□□ -0.97
CALD1-219ENST00000480638 ZNF862O60290 1169 aa8.97□□□□□ -0.97
CALD1-219ENST00000480638 AOC2O75106 756 aa8.97□□□□□ -0.97
CALD1-219ENST00000480638 FURINP09958 794 aa8.97□□□□□ -0.97
CALD1-219ENST00000480638 ADH5P11766 374 aa8.97□□□□□ -0.97
CALD1-219ENST00000480638 RASIP1Q5U651 963 aa8.97□□□□□ -0.97
CALD1-219ENST00000480638 MAP1SQ66K74 1059 aaPredicted RBP8.97□□□□□ -0.97
CALD1-219ENST00000480638 C12orf50Q8NA57 414 aaPredicted RBP8.97□□□□□ -0.97
CALD1-219ENST00000480638 UTP4Q969X6 686 aaKnown RBP8.97□□□□□ -0.97
CALD1-219ENST00000480638 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
CALD1-219ENST00000480638 CBX8Q9HC52 389 aa8.97□□□□□ -0.97
CALD1-219ENST00000480638 RAD18Q9NS91 495 aa8.97□□□□□ -0.97
CALD1-219ENST00000480638 PODXL2Q9NZ53 605 aa8.97□□□□□ -0.97
CALD1-219ENST00000480638 DRD2P14416 443 aa8.96□□□□□ -0.98
CALD1-219ENST00000480638 LIG1P18858 919 aa8.96□□□□□ -0.98
CALD1-219ENST00000480638 SOX4Q06945 474 aaPredicted RBP8.96□□□□□ -0.98
CALD1-219ENST00000480638 GRIN3AQ8TCU5 1115 aa8.96□□□□□ -0.98
CALD1-219ENST00000480638 MYRFLQ96LU7 910 aa8.96□□□□□ -0.98
CALD1-219ENST00000480638 GAS2O43903 313 aaKnown RBP8.95□□□□□ -0.98
CALD1-219ENST00000480638 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 H2AFB2P0C5Z0 115 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 HNRNPUQ00839 825 aaKnown RBP eCLIP8.95□□□□□ -0.98
CALD1-219ENST00000480638 KIF4BQ2VIQ3 1234 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 AKAP4Q5JQC9 854 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 TTBK2Q6IQ55 1244 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 LLGL2Q6P1M3 1020 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 PRR23CQ6ZRP0 262 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 NOC4LQ9BVI4 516 aaKnown RBP8.95□□□□□ -0.98
CALD1-219ENST00000480638 CACNA2D2Q9NY47 1150 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 SYNGAP1Q96PV0 1343 aa8.95□□□□□ -0.98
CALD1-219ENST00000480638 DYRK3O43781 588 aa8.94□□□□□ -0.98
CALD1-219ENST00000480638 LRRC14Q15048 493 aa8.94□□□□□ -0.98
CALD1-219ENST00000480638 MPRIPQ6WCQ1 1025 aa8.94□□□□□ -0.98
CALD1-219ENST00000480638 C2CD4AQ8NCU7 369 aaPredicted RBP8.94□□□□□ -0.98
CALD1-219ENST00000480638 GPBAR1Q8TDU6 330 aa8.94□□□□□ -0.98
CALD1-219ENST00000480638 CYP8B1Q9UNU6 501 aa8.94□□□□□ -0.98
CALD1-219ENST00000480638 AP4E1Q9UPM8 1137 aa8.94□□□□□ -0.98
CALD1-219ENST00000480638 HIF3AQ9Y2N7 669 aa8.94□□□□□ -0.98
CALD1-219ENST00000480638 TMPRSS2O15393 492 aa8.93□□□□□ -0.98
CALD1-219ENST00000480638 DHX15O43143 795 aaKnown RBP8.93□□□□□ -0.98
CALD1-219ENST00000480638 TRIM37O94972 964 aa8.93□□□□□ -0.98
CALD1-219ENST00000480638 LIG3P49916 1009 aa8.93□□□□□ -0.98
CALD1-219ENST00000480638 MAP3K11Q16584 847 aa8.93□□□□□ -0.98
CALD1-219ENST00000480638 FAM20CQ8IXL6 584 aa8.93□□□□□ -0.98
CALD1-219ENST00000480638 PCDHGC5Q9Y5F6 944 aa8.93□□□□□ -0.98
CALD1-219ENST00000480638 ACTL7BQ9Y614 415 aa8.93□□□□□ -0.98
CALD1-219ENST00000480638 BMP3P12645 472 aa8.92□□□□□ -0.98
CALD1-219ENST00000480638 RPS26P62854 115 aaKnown RBP8.92□□□□□ -0.98
CALD1-219ENST00000480638 SGO2Q562F6 1265 aa8.92□□□□□ -0.98
CALD1-219ENST00000480638 ACSBG1Q96GR2 724 aa8.92□□□□□ -0.98
CALD1-219ENST00000480638 PPP1R9AQ9ULJ8 1098 aa8.92□□□□□ -0.98
CALD1-219ENST00000480638 ID3Q02535 119 aa8.91□□□□□ -0.98
CALD1-219ENST00000480638 SCARA3Q6AZY7 606 aa8.91□□□□□ -0.98
CALD1-219ENST00000480638 GAL3ST3Q96A11 431 aa8.91□□□□□ -0.98
CALD1-219ENST00000480638 GSX1Q9H4S2 264 aaPredicted RBP8.91□□□□□ -0.98
CALD1-219ENST00000480638 RAXQ9Y2V3 346 aa8.91□□□□□ -0.98
CALD1-219ENST00000480638 K7ELQ4 463 aaPredicted RBP8.9□□□□□ -0.98
CALD1-219ENST00000480638 SLFN14P0C7P3 912 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 RLBP1P12271 317 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 LDLRAD1Q5T700 205 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 AGMOQ6ZNB7 445 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 DYMQ7RTS9 669 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 KCNF1Q9H3M0 494 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 SEMA6BQ9H3T3 888 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 FAM105AQ9NUU6 356 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 CRIM1Q9NZV1 1036 aa8.9□□□□□ -0.98
CALD1-219ENST00000480638 MAP4P27816 1152 aaKnown RBP8.89□□□□□ -0.99
CALD1-219ENST00000480638 CDPF1Q6NVV7 123 aa8.89□□□□□ -0.99
CALD1-219ENST00000480638 UNCXA6NJT0 531 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 F6X3S4 739 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 RECKO95980 971 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 TFE3P19532 575 aaPredicted RBP8.88□□□□□ -0.99
CALD1-219ENST00000480638 VAMP1P23763 118 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 USP11P51784 963 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 ZC3H12AQ5D1E8 599 aaKnown RBP8.88□□□□□ -0.99
CALD1-219ENST00000480638 BEND4Q6ZU67 534 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 MRRFQ96E11 262 aaKnown RBP8.88□□□□□ -0.99
CALD1-219ENST00000480638 FANCD2OSQ96PS1 177 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 ATXN3LQ9H3M9 355 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 C7orf69Q9H7B7 122 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 STOML1Q9UBI4 398 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 TLR6Q9Y2C9 796 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 PCDHB5Q9Y5E4 795 aa8.88□□□□□ -0.99
CALD1-219ENST00000480638 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.87□□□□□ -0.99
CALD1-219ENST00000480638 ADAM23O75077 832 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 RAB6AP20340 208 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 LMNB1P20700 586 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 ITGB7P26010 798 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 RXRBP28702 533 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 ASPAP45381 313 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 PTPN11Q06124 597 aaPredicted RBP8.87□□□□□ -0.99
CALD1-219ENST00000480638 SEPT6Q14141 434 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 CLEC10AQ8IUN9 316 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 TMEM87AQ8NBN3 555 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 PHC3Q8NDX5 983 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 FBLIM1Q8WUP2 373 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 EZH1Q92800 747 aaPredicted RBP8.87□□□□□ -0.99
CALD1-219ENST00000480638 FAM83CQ9BQN1 747 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 YIPF2Q9BWQ6 316 aa8.87□□□□□ -0.99
CALD1-219ENST00000480638 BACH2Q9BYV9 841 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms