RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 RFC4P35249 363 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 RPS8P62241 208 aaKnown RBP19.67■□□□□ 0.74
SH3D21-203ENST00000480549 CCT2P78371 535 aaKnown RBP19.67■□□□□ 0.74
SH3D21-203ENST00000480549 DDX11Q96FC9 970 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 QTRT2Q9H974 415 aaKnown RBP19.67■□□□□ 0.74
SH3D21-203ENST00000480549 KIF3AQ9Y496 699 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 PATL2C9JE40 543 aaKnown RBP19.67■□□□□ 0.74
SH3D21-203ENST00000480549 APPP05067 770 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 ARMT1Q9H993 441 aa19.67■□□□□ 0.74
SH3D21-203ENST00000480549 NCOA5Q9HCD5 579 aaKnown RBP19.67■□□□□ 0.74
SH3D21-203ENST00000480549 UBE2HP62256 183 aa19.66■□□□□ 0.74
SH3D21-203ENST00000480549 RALYLQ86SE5 291 aaKnown RBP19.66■□□□□ 0.74
SH3D21-203ENST00000480549 RNF214Q8ND24 703 aa19.66■□□□□ 0.74
SH3D21-203ENST00000480549 FAM84BQ96KN1 310 aaPredicted RBP19.66■□□□□ 0.74
SH3D21-203ENST00000480549 PNPLA7Q6ZV29 1317 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 PTPDC1A2A3K4 754 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 IFNL3Q8IZI9 196 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 CARMIL3Q8ND23 1372 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 IRX3P78415 501 aaPredicted RBP19.65■□□□□ 0.74
SH3D21-203ENST00000480549 FAM173BQ6P4H8 233 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 LCORLQ8N3X6 602 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 SYCE3A1L190 88 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 GSG1L2A8MUP6 293 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 NFIXQ14938 502 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 LRP2BPQ9P2M1 347 aa19.65■□□□□ 0.74
SH3D21-203ENST00000480549 LRSAM1Q6UWE0 723 aa19.64■□□□□ 0.73
SH3D21-203ENST00000480549 SECISBP2LQ93073 1101 aaKnown RBP19.64■□□□□ 0.73
SH3D21-203ENST00000480549 PRIMPOLQ96LW4 560 aa19.64■□□□□ 0.73
SH3D21-203ENST00000480549 GNL3LQ9NVN8 582 aaKnown RBP19.64■□□□□ 0.73
SH3D21-203ENST00000480549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.64■□□□□ 0.73
SH3D21-203ENST00000480549 KLRK1P26718 216 aa19.64■□□□□ 0.73
SH3D21-203ENST00000480549 HMGN5P82970 282 aaKnown RBP19.64■□□□□ 0.73
SH3D21-203ENST00000480549 ADGRA1Q86SQ6 560 aa19.64■□□□□ 0.73
SH3D21-203ENST00000480549 HPS5Q9UPZ3 1129 aa19.64■□□□□ 0.73
SH3D21-203ENST00000480549 RESTQ13127 1097 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 CAVIN4Q5BKX8 364 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 CYB5R4Q7L1T6 521 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 FBXO33Q7Z6M2 555 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 PRKAB2O43741 272 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 ADRA2BP18089 450 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 FAM184AQ8NB25 1140 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 NEDD4P46934 1319 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 KRT85P78386 507 aa19.63■□□□□ 0.73
SH3D21-203ENST00000480549 TTC6Q86TZ1 520 aa19.62■□□□□ 0.73
SH3D21-203ENST00000480549 C17orf53Q8N3J3 647 aaPredicted RBP19.62■□□□□ 0.73
SH3D21-203ENST00000480549 SYAP1Q96A49 352 aaPredicted RBP19.62■□□□□ 0.73
SH3D21-203ENST00000480549 NAPBQ9H115 298 aa19.62■□□□□ 0.73
SH3D21-203ENST00000480549 TACC3Q9Y6A5 838 aa19.62■□□□□ 0.73
SH3D21-203ENST00000480549 KLF18A0A0U1RQI7 1052 aa19.62■□□□□ 0.73
SH3D21-203ENST00000480549 TRDNQ13061 729 aa19.62■□□□□ 0.73
SH3D21-203ENST00000480549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.61■□□□□ 0.73
SH3D21-203ENST00000480549 GNAT2P19087 354 aa19.61■□□□□ 0.73
SH3D21-203ENST00000480549 MIGA1Q8NAN2 632 aa19.61■□□□□ 0.73
SH3D21-203ENST00000480549 ANKRD2Q9GZV1 360 aa19.61■□□□□ 0.73
SH3D21-203ENST00000480549 ELP1O95163 1332 aa19.61■□□□□ 0.73
SH3D21-203ENST00000480549 NAA16Q6N069 864 aaPredicted RBP19.61■□□□□ 0.73
SH3D21-203ENST00000480549 ABCF2Q9UG63 623 aa19.61■□□□□ 0.73
SH3D21-203ENST00000480549 IRS2Q9Y4H2 1338 aa19.61■□□□□ 0.73
SH3D21-203ENST00000480549 FDPSP14324 419 aaKnown RBP19.6■□□□□ 0.73
SH3D21-203ENST00000480549 CYP7A1P22680 504 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 SLC4A4Q9Y6R1 1079 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 B4E1Z4 1266 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 H3BQV1 296 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 IFFO2Q5TF58 517 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 VPS37DQ86XT2 251 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 CHMP4CQ96CF2 233 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 INCENPQ9NQS7 918 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 GOLGA8BA8MQT2 603 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 SH2B2O14492 632 aaPredicted RBP19.6■□□□□ 0.73
SH3D21-203ENST00000480549 ZNF384Q8TF68 577 aa19.6■□□□□ 0.73
SH3D21-203ENST00000480549 MAST2Q6P0Q8 1798 aa19.59■□□□□ 0.73
SH3D21-203ENST00000480549 SEMA3EO15041 775 aa19.59■□□□□ 0.73
SH3D21-203ENST00000480549 CTDSPL2Q05D32 466 aa19.59■□□□□ 0.73
SH3D21-203ENST00000480549 TEX2Q8IWB9 1127 aa19.59■□□□□ 0.73
SH3D21-203ENST00000480549 ANGEL1Q9UNK9 670 aaKnown RBP19.59■□□□□ 0.73
SH3D21-203ENST00000480549 PDS5AQ29RF7 1337 aaKnown RBP19.59■□□□□ 0.73
SH3D21-203ENST00000480549 SLC27A3Q5K4L6 730 aa19.59■□□□□ 0.73
SH3D21-203ENST00000480549 KRT27Q7Z3Y8 459 aa19.59■□□□□ 0.73
SH3D21-203ENST00000480549 CNBD1Q8NA66 436 aa19.59■□□□□ 0.73
SH3D21-203ENST00000480549 ZSCAN16Q9H4T2 348 aaPredicted RBP19.59■□□□□ 0.73
SH3D21-203ENST00000480549 RAI14Q9P0K7 980 aa19.59■□□□□ 0.73
SH3D21-203ENST00000480549 PPFIA3O75145 1194 aa19.58■□□□□ 0.73
SH3D21-203ENST00000480549 GTF2F1P35269 517 aaKnown RBP eCLIP19.58■□□□□ 0.732e-7■■■■□ 24.9
SH3D21-203ENST00000480549 ZBTB9Q96C00 473 aa19.58■□□□□ 0.73
SH3D21-203ENST00000480549 GYS1P13807 737 aa19.58■□□□□ 0.73
SH3D21-203ENST00000480549 SLC51AQ86UW1 340 aa19.58■□□□□ 0.73
SH3D21-203ENST00000480549 RIOK1Q9BRS2 568 aaKnown RBP19.58■□□□□ 0.73
SH3D21-203ENST00000480549 ECM29Q5VYK3 1845 aa19.58■□□□□ 0.72
SH3D21-203ENST00000480549 CCDC183Q5T5S1 534 aa19.58■□□□□ 0.72
SH3D21-203ENST00000480549 PRR5LQ6MZQ0 368 aa19.58■□□□□ 0.72
SH3D21-203ENST00000480549 IGDCC4Q8TDY8 1250 aa19.58■□□□□ 0.72
SH3D21-203ENST00000480549 TFCP2L1Q9NZI6 479 aa19.58■□□□□ 0.72
SH3D21-203ENST00000480549 NPHP1O15259 732 aa19.57■□□□□ 0.72
SH3D21-203ENST00000480549 SENP2Q9HC62 589 aa19.57■□□□□ 0.72
SH3D21-203ENST00000480549 TFIP11Q9UBB9 837 aaKnown RBP19.57■□□□□ 0.72
SH3D21-203ENST00000480549 CCDC88AQ3V6T2 1871 aa19.57■□□□□ 0.72
SH3D21-203ENST00000480549 TRIM37O94972 964 aa19.57■□□□□ 0.72
SH3D21-203ENST00000480549 NOLC1Q14978 699 aaKnown RBP eCLIP19.57■□□□□ 0.72
SH3D21-203ENST00000480549 AKNAD1Q5T1N1 836 aa19.57■□□□□ 0.72
SH3D21-203ENST00000480549 RAB11FIP4Q86YS3 637 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms