RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CCDC73Q6ZRK6 1079 aa11.71□□□□□ -0.53
COMMD4-203ENST00000480484 C10orf67Q8IYJ2 551 aa11.71□□□□□ -0.53
COMMD4-203ENST00000480484 CCDC34Q96HJ3 373 aa11.71□□□□□ -0.53
COMMD4-203ENST00000480484 ZNF496Q96IT1 587 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-203ENST00000480484 TMX4Q9H1E5 349 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-203ENST00000480484 GRM8O00222 908 aa11.71□□□□□ -0.53
COMMD4-203ENST00000480484 PHKG2P15735 406 aa11.71□□□□□ -0.53
COMMD4-203ENST00000480484 CREBRFQ8IUR6 639 aa11.71□□□□□ -0.53
COMMD4-203ENST00000480484 DHX40Q8IX18 779 aaKnown RBP11.71□□□□□ -0.53
COMMD4-203ENST00000480484 CEP57L1Q8IYX8 460 aa11.71□□□□□ -0.53
COMMD4-203ENST00000480484 XAGE3Q8WTP9 111 aa11.71□□□□□ -0.53
COMMD4-203ENST00000480484 IRF6O14896 467 aa11.71□□□□□ -0.54
COMMD4-203ENST00000480484 URI1O94763 535 aaPredicted RBP11.71□□□□□ -0.54
COMMD4-203ENST00000480484 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.54
COMMD4-203ENST00000480484 ZRSR1Q15695 479 aaKnown RBP11.71□□□□□ -0.54
COMMD4-203ENST00000480484 SMARCE1Q969G3 411 aa11.71□□□□□ -0.54
COMMD4-203ENST00000480484 SLC52A2Q9HAB3 445 aa11.71□□□□□ -0.54
COMMD4-203ENST00000480484 DDX21Q9NR30 783 aaKnown RBP eCLIP11.71□□□□□ -0.54
COMMD4-203ENST00000480484 RSPH14Q9UHP6 348 aa11.71□□□□□ -0.54
COMMD4-203ENST00000480484 IQSEC3Q9UPP2 1182 aaPredicted RBP11.71□□□□□ -0.54
COMMD4-203ENST00000480484 GLI3P10071 1580 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 ALDH1L1O75891 902 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 ATF3P18847 181 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 GSDMDP57764 484 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 MTX1Q13505 466 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 GNL2Q13823 731 aaKnown RBP11.7□□□□□ -0.54
COMMD4-203ENST00000480484 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 HSP90AA4PQ58FG1 418 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 RIC3Q7Z5B4 369 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 ANO10Q9NW15 660 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 PRR12Q9ULL5 1215 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 TMA7Q9Y2S6 64 aaKnown RBP11.7□□□□□ -0.54
COMMD4-203ENST00000480484 BIN1O00499 593 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 GYS2P54840 703 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 IGBP1P78318 339 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 ANKRD1Q15327 319 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 RINLQ6ZS11 566 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 STK11IPQ8N1F8 1099 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 FSD1Q9BTV5 496 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 L2HGDHQ9H9P8 463 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 ECHDC1Q9NTX5 307 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 CFAP45Q9UL16 551 aa11.7□□□□□ -0.54
COMMD4-203ENST00000480484 CYP27B1O15528 508 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 NUBP1P53384 320 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 STOX1Q6ZVD7 989 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 TXLNBQ8N3L3 684 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 CCDC191Q8NCU4 936 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 LINS1Q8NG48 757 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 MYD88Q99836 296 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 RREB1Q92766 1687 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 NRDCO43847 1150 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 TATP17735 454 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-203ENST00000480484 OAS2P29728 719 aaKnown RBP11.69□□□□□ -0.54
COMMD4-203ENST00000480484 ME1P48163 572 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 HSPA2P54652 639 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
COMMD4-203ENST00000480484 NKX2-3Q8TAU0 364 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 RPS6KB1P23443 525 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 RESTQ13127 1097 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 TCEAL1Q15170 157 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-203ENST00000480484 C11orf96Q7Z7L8 435 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 CARD6Q9BX69 1037 aa11.69□□□□□ -0.54
COMMD4-203ENST00000480484 XPO4Q9C0E2 1151 aaKnown RBP11.69□□□□□ -0.54
COMMD4-203ENST00000480484 SBF2Q86WG5 1849 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 SOS2Q07890 1332 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-203ENST00000480484 IRX3P78415 501 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-203ENST00000480484 GPS2Q13227 327 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 ARMCX5Q6P1M9 558 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 UBA5Q9GZZ9 404 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 RASSF4Q9H2L5 321 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
COMMD4-203ENST00000480484 ORC3Q9UBD5 711 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-203ENST00000480484 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 FANCGO15287 622 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 ZSCAN26Q16670 478 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 NPAS4Q8IUM7 802 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 FSIP1Q8NA03 581 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 NAT10Q9H0A0 1025 aaKnown RBP11.68□□□□□ -0.54
COMMD4-203ENST00000480484 TTC41PQ6P2S7 1318 aa11.68□□□□□ -0.54
COMMD4-203ENST00000480484 ZNF335Q9H4Z2 1342 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-203ENST00000480484 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
COMMD4-203ENST00000480484 NEURL1BA8MQ27 555 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 CTAGE5O15320 804 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
COMMD4-203ENST00000480484 Q6ZUG5 572 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
COMMD4-203ENST00000480484 DENND2AQ9ULE3 1009 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms