RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, human

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF25-213	ENST00000480393	DUOX1	Q9NRD9	1551 aa		32.79	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	LDHB	P07195	334 aa	Known RBP	32.79	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	LARP1B	Q659C4	914 aa	Known RBP	32.79	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	LLPH	Q9BRT6	129 aa	Known RBP	32.79	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	CD209	Q9NNX6	404 aa		32.79	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	POLL	Q9UGP5	575 aa		32.79	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	VPS37C	A5D8V6	355 aa	Predicted RBP	32.78	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	BAG6	P46379	1132 aa		32.78	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	AKNAD1	Q5T1N1	836 aa		32.78	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	TMX4	Q9H1E5	349 aa	Predicted RBP	32.78	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	CCDC88A	Q3V6T2	1871 aa		32.78	■■■□□ 2.84
TNFRSF25-213	ENST00000480393		B4E1Z4	1266 aa		32.77	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	PDIA3	P30101	505 aa	Known RBP	32.77	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	MFSD6	Q6ZSS7	791 aa		32.77	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	GPHN	Q9NQX3	736 aa	Predicted RBP	32.77	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	LTBP1	Q14766	1721 aa		32.77	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	QSER1	Q2KHR3	1735 aa		32.77	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	F13A1	P00488	732 aa		32.77	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	KRT23	Q9C075	422 aa		32.77	■■■□□ 2.84
TNFRSF25-213	ENST00000480393	EVC	P57679	992 aa		32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	PPARA	Q07869	468 aa		32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	CYB5R4	Q7L1T6	521 aa		32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	STAG1	Q8WVM7	1258 aa		32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	CRNKL1	Q9BZJ0	848 aa	Known RBP	32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	RNF41	Q9H4P4	317 aa	Predicted RBP	32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	MTMR6	Q9Y217	621 aa		32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	ATP6V1D	Q9Y5K8	247 aa		32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	CHD4	Q14839	1912 aa		32.76	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	KLF18	A0A0U1RQI7	1052 aa		32.75	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	JAK2	O60674	1132 aa		32.75	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	IL1R1	P14778	569 aa		32.75	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	CCT2	P78371	535 aa	Known RBP	32.75	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	GSTO1	P78417	241 aa		32.75	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	C2CD5	Q86YS7	1000 aa		32.74	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	GOLGA8B	A8MQT2	603 aa		32.74	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	GIMAP6	Q6P9H5	292 aa		32.74	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.74	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	CHAMP1	Q96JM3	812 aa		32.74	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	TMEM87B	Q96K49	555 aa		32.74	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	TOMM22	Q9NS69	142 aa		32.74	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	ANGEL1	Q9UNK9	670 aa	Known RBP	32.74	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	KIAA1551	Q9HCM1	1747 aa		32.73	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	MINDY4B	A8MYZ0	360 aa		32.73	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	32.73	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	FOXD4L3	Q6VB84	417 aa	Predicted RBP	32.73	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	MPND	Q8N594	471 aa		32.73	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	FAM184A	Q8NB25	1140 aa		32.73	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	LMBRD1	Q9NUN5	540 aa		32.73	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	SH2B2	O14492	632 aa	Predicted RBP	32.72	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	PRPF40A	O75400	957 aa	Known RBP	32.72	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	HMGN5	P82970	282 aa	Known RBP	32.72	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	NCOA5	Q9HCD5	579 aa	Known RBP	32.72	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	KIF3A	Q9Y496	699 aa		32.72	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	NSUN7	Q8NE18	718 aa	Known RBP	32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	SMARCC2	Q8TAQ2	1214 aa		32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	DDX11	Q96FC9	970 aa		32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	GZF1	Q9H116	711 aa	Predicted RBP	32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	BRPF3	Q9ULD4	1205 aa		32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	DDX49	Q9Y6V7	483 aa	Known RBP	32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393		H0YIN7	160 aa		32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	KDM4A	O75164	1064 aa		32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	RRP12	Q5JTH9	1297 aa	Known RBP	32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	DPP8	Q6V1X1	898 aa	Predicted RBP	32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	INCENP	Q9NQS7	918 aa		32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	ANAPC4	Q9UJX5	808 aa		32.71	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	PTPDC1	A2A3K4	754 aa		32.7	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	NOL10	Q9BSC4	688 aa	Known RBP	32.7	■■■□□ 2.83
TNFRSF25-213	ENST00000480393	DHX16	O60231	1041 aa	Known RBP	32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	LDHC	P07864	332 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	TMEM67	Q5HYA8	995 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	STYK1	Q6J9G0	422 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	STK11IP	Q8N1F8	1099 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	ATP8A2	Q9NTI2	1148 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	TACC3	Q9Y6A5	838 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	RIMBP2	O15034	1052 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	KLHL40	Q2TBA0	621 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	NKX2-3	Q8TAU0	364 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	TBC1D22A	Q8WUA7	517 aa		32.68	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	CTDNEP1	O95476	244 aa		32.67	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	SART3	Q15020	963 aa	Known RBP	32.67	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	NFXL1	Q6ZNB6	911 aa		32.67	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	CDC37L1	Q7L3B6	337 aa		32.67	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.67	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	COA1	Q9GZY4	146 aa		32.67	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	ZSWIM5	Q9P217	1185 aa		32.67	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	IFIT3	O14879	490 aa	Known RBP	32.66	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	BAG3	O95817	575 aa		32.66	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	OLFM4	Q6UX06	510 aa		32.66	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	DEFB132	Q7Z7B7	95 aa		32.66	■■■□□ 2.82
TNFRSF25-213	ENST00000480393		H3BQV1	296 aa		32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	DIXDC1	Q155Q3	683 aa		32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	GRIK5	Q16478	980 aa		32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	MFSD14B	Q5SR56	506 aa		32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	IFFO2	Q5TF58	517 aa		32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	CTR9	Q6PD62	1173 aa		32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	IGDCC4	Q8TDY8	1250 aa		32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	DCP1A	Q9NPI6	582 aa	Predicted RBP	32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	HPS5	Q9UPZ3	1129 aa		32.65	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	LY9	Q9HBG7	655 aa		32.64	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms