RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 APOBEC3HQ6NTF7 200 aaKnown RBP13.33□□□□□ -0.28
CNKSR1-204ENST00000480348 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
CNKSR1-204ENST00000480348 ERO1AQ96HE7 468 aa13.33□□□□□ -0.28
CNKSR1-204ENST00000480348 ELP3Q9H9T3 547 aa13.33□□□□□ -0.28
CNKSR1-204ENST00000480348 HPS5Q9UPZ3 1129 aa13.33□□□□□ -0.28
CNKSR1-204ENST00000480348 DOCK1Q14185 1865 aa13.32□□□□□ -0.28
CNKSR1-204ENST00000480348 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
CNKSR1-204ENST00000480348 MVPQ14764 893 aaKnown RBP13.32□□□□□ -0.28
CNKSR1-204ENST00000480348 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.32□□□□□ -0.28
CNKSR1-204ENST00000480348 WRNIP1Q96S55 665 aa13.32□□□□□ -0.28
CNKSR1-204ENST00000480348 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
CNKSR1-204ENST00000480348 ZCCHC17Q9NP64 241 aaKnown RBP13.32□□□□□ -0.28
CNKSR1-204ENST00000480348 MS4A1P11836 297 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 RLBP1P12271 317 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 PRDX5P30044 214 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 GJA5P36382 358 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 PHKA1P46020 1223 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 CACNB3P54284 484 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 TFCP2Q12800 502 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 G3BP1Q13283 466 aaKnown RBP eCLIP13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 OS9Q13438 667 aaPredicted RBP13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 ARHGEF6Q15052 776 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 SPTY2D1Q68D10 685 aaPredicted RBP13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 CCDC102BQ68D86 513 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 ERO1BQ86YB8 467 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 FAM151AQ8WW52 585 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 ZNF341Q9BYN7 854 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 DAGLAQ9Y4D2 1042 aa13.31□□□□□ -0.28
CNKSR1-204ENST00000480348 PDE4DIPQ5VU43 2346 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 PNMA6EA0A0J9YXQ4 647 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 A0A1B0GUL7 405 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 CRHR2Q13324 411 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 GORABQ5T7V8 394 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 DZIP1Q86YF9 867 aaKnown RBP13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 CDAN1Q8IWY9 1227 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 NEUROD6Q96NK8 337 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 PTPRFP10586 1907 aa13.3□□□□□ -0.28
CNKSR1-204ENST00000480348 CCL15-CCL14A0A0B4J2E2 113 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 CETPP11597 493 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 ADORA1P30542 326 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 PPIL2Q13356 520 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 SNAPC2Q13487 334 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 RASGRF1Q13972 1273 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 DIXDC1Q155Q3 683 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 CCL15Q16663 113 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 CDC42EP5Q6NZY7 148 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 MS4A4AQ96JQ5 239 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 SNCAIPQ9Y6H5 919 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 GAKO14976 1311 aa13.29□□□□□ -0.28
CNKSR1-204ENST00000480348 FOCADQ5VW36 1801 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 ATAD5Q96QE3 1844 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 ZBTB7BO15156 539 aaPredicted RBP13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 SOX10P56693 466 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 TIMM10P62072 90 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 SP3Q02447 781 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 PPATQ06203 517 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 R3HDMLQ9H3Y0 253 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 RFX7Q2KHR2 1363 aa13.28□□□□□ -0.28
CNKSR1-204ENST00000480348 ENTPD3O75355 529 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 ATP8B2P98198 1209 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 NOL9Q5SY16 702 aaKnown RBP13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 OTOP1Q7RTM1 612 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 BRI3BPQ8WY22 251 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 XAGE2Q96GT9 111 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 PTPN18Q99952 460 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 IDI2Q9BXS1 227 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 USP40Q9NVE5 1235 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 ABCF2Q9UG63 623 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 COL2A1P02458 1487 aaPredicted RBP13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 PHIPQ8WWQ0 1821 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 CDK5RAP2Q96SN8 1893 aa13.27□□□□□ -0.29
CNKSR1-204ENST00000480348 MROH7-TTC4A0A0A0MT08 1334 aa13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 MGAMO43451 1857 aa13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 SURF6O75683 361 aaKnown RBP13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 MAP4K4O95819 1239 aaPredicted RBP13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 GSTO1P78417 241 aa13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 TCP10Q12799 353 aa13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 ERICH6Q7L0X2 663 aa13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 SSH3Q8TE77 659 aa13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
CNKSR1-204ENST00000480348 IRF6O14896 467 aa13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 IGSF3O75054 1194 aa13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 NFIAQ12857 509 aa13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 POLA2Q14181 598 aa13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 CD99L2Q8TCZ2 262 aa13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
CNKSR1-204ENST00000480348 GPR108Q9NPR9 543 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms