RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 TRPM4Q8TD43 1214 aa13.48□□□□□ -0.25
CLDN11-205ENST00000480067 AIDAQ96BJ3 306 aa13.48□□□□□ -0.25
CLDN11-205ENST00000480067 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
CLDN11-205ENST00000480067 USP40Q9NVE5 1235 aa13.48□□□□□ -0.25
CLDN11-205ENST00000480067 RFX7Q2KHR2 1363 aa13.47□□□□□ -0.25
CLDN11-205ENST00000480067 PLCG2P16885 1265 aa13.47□□□□□ -0.25
CLDN11-205ENST00000480067 HIRAP54198 1017 aaPredicted RBP13.47□□□□□ -0.25
CLDN11-205ENST00000480067 PPP4CP60510 307 aa13.47□□□□□ -0.25
CLDN11-205ENST00000480067 EAPPQ56P03 285 aaPredicted RBP13.47□□□□□ -0.25
CLDN11-205ENST00000480067 ZMYM1Q5SVZ6 1142 aa13.47□□□□□ -0.25
CLDN11-205ENST00000480067 CERS3Q8IU89 383 aa13.47□□□□□ -0.25
CLDN11-205ENST00000480067 OSBP2Q969R2 916 aa13.47□□□□□ -0.25
CLDN11-205ENST00000480067 ZBED3Q96IU2 234 aaPredicted RBP13.47□□□□□ -0.25
CLDN11-205ENST00000480067 FAM227BQ96M60 508 aa13.47□□□□□ -0.25
CLDN11-205ENST00000480067 PUS7LQ9H0K6 701 aaKnown RBP13.47□□□□□ -0.25
CLDN11-205ENST00000480067 TDRD3Q9H7E2 651 aaKnown RBP13.47□□□□□ -0.25
CLDN11-205ENST00000480067 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
CLDN11-205ENST00000480067 CHMLP26374 656 aa13.46□□□□□ -0.25
CLDN11-205ENST00000480067 DYNLL1P63167 89 aaKnown RBP13.46□□□□□ -0.25
CLDN11-205ENST00000480067 NMIQ13287 307 aaPredicted RBP13.46□□□□□ -0.25
CLDN11-205ENST00000480067 MCMDC2Q4G0Z9 681 aa13.46□□□□□ -0.25
CLDN11-205ENST00000480067 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.25
CLDN11-205ENST00000480067 RUFY2Q8WXA3 655 aa13.46□□□□□ -0.25
CLDN11-205ENST00000480067 TMOD2Q9NZR1 351 aa13.46□□□□□ -0.25
CLDN11-205ENST00000480067 ZNF646O15015 1829 aaPredicted RBP13.45□□□□□ -0.26
CLDN11-205ENST00000480067 CLRN2A0PK11 232 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 CDC45O75419 566 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 MBD4O95243 580 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 ZC3H15Q8WU90 426 aaKnown RBP13.45□□□□□ -0.26
CLDN11-205ENST00000480067 SEC62Q99442 399 aaKnown RBP13.45□□□□□ -0.26
CLDN11-205ENST00000480067 RIOK1Q9BRS2 568 aaKnown RBP13.45□□□□□ -0.26
CLDN11-205ENST00000480067 ZNF70Q9UC06 446 aaPredicted RBP13.45□□□□□ -0.26
CLDN11-205ENST00000480067 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 A0A0D9SFI3 127 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 RHBDL3P58872 404 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 SH3RF3Q8TEJ3 882 aaPredicted RBP13.45□□□□□ -0.26
CLDN11-205ENST00000480067 CRNKL1Q9BZJ0 848 aaKnown RBP13.45□□□□□ -0.26
CLDN11-205ENST00000480067 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 VEZTQ9HBM0 779 aa13.45□□□□□ -0.26
CLDN11-205ENST00000480067 WDR90Q96KV7 1748 aa13.44□□□□□ -0.26
CLDN11-205ENST00000480067 M0R2C6 588 aa13.44□□□□□ -0.26
CLDN11-205ENST00000480067 GPAA1O43292 621 aa13.44□□□□□ -0.26
CLDN11-205ENST00000480067 MFAP1P55081 439 aaKnown RBP13.44□□□□□ -0.26
CLDN11-205ENST00000480067 ANGEL2Q5VTE6 544 aaKnown RBP13.44□□□□□ -0.26
CLDN11-205ENST00000480067 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
CLDN11-205ENST00000480067 DCPSQ96C86 337 aaKnown RBP13.44□□□□□ -0.26
CLDN11-205ENST00000480067 STRBPQ96SI9 672 aaKnown RBP13.44□□□□□ -0.26
CLDN11-205ENST00000480067 ASTN2O75129 1339 aaPredicted RBP13.44□□□□□ -0.26
CLDN11-205ENST00000480067 GNAT2P19087 354 aa13.43□□□□□ -0.26
CLDN11-205ENST00000480067 USP5P45974 858 aa13.43□□□□□ -0.26
CLDN11-205ENST00000480067 CACNB3P54284 484 aa13.43□□□□□ -0.26
CLDN11-205ENST00000480067 GGA3Q9NZ52 723 aa13.43□□□□□ -0.26
CLDN11-205ENST00000480067 SLC4A4Q9Y6R1 1079 aa13.43□□□□□ -0.26
CLDN11-205ENST00000480067 DOCK2Q92608 1830 aa13.43□□□□□ -0.26
CLDN11-205ENST00000480067 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 APPP05067 770 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 TNNI2P48788 182 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 TNFAIP1Q13829 316 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 FKBP1CQ5VVH2 108 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 APOBEC3FQ8IUX4 373 aaKnown RBP13.42□□□□□ -0.26
CLDN11-205ENST00000480067 SULF1Q8IWU6 871 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
CLDN11-205ENST00000480067 TGFBRAP1Q8WUH2 860 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 DDRGK1Q96HY6 314 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 IDI2Q9BXS1 227 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 SCN4AP35499 1836 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 MYO5AQ9Y4I1 1855 aaKnown RBP13.42□□□□□ -0.26
CLDN11-205ENST00000480067 MYH2Q9UKX2 1941 aa13.42□□□□□ -0.26
CLDN11-205ENST00000480067 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-205ENST00000480067 TCP10Q12799 353 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 NFIAQ12857 509 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 PICALMQ13492 652 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 ATP8A2Q9NTI2 1148 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 CCDC171Q6TFL3 1326 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 RAD50Q92878 1312 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 PITPNM2Q9BZ72 1349 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 PATL2C9JE40 543 aaKnown RBP13.41□□□□□ -0.26
CLDN11-205ENST00000480067 SGSM2O43147 1006 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 PRKAB2O43741 272 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 KRT26Q7Z3Y9 468 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 ZNF589Q86UQ0 364 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-205ENST00000480067 MAPKAPK5Q8IW41 473 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 ESYT1Q9BSJ8 1104 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 NACAP1Q9BZK3 213 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
CLDN11-205ENST00000480067 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
CLDN11-205ENST00000480067 MAST2Q6P0Q8 1798 aa13.4□□□□□ -0.26
CLDN11-205ENST00000480067 ENTPD3O75355 529 aa13.4□□□□□ -0.26
CLDN11-205ENST00000480067 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
CLDN11-205ENST00000480067 RASA3Q14644 834 aa13.4□□□□□ -0.26
CLDN11-205ENST00000480067 CDC37L1Q7L3B6 337 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms