RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 LMBR1LQ6UX01 489 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 INTS8Q75QN2 995 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 CRACR2BQ8N4Y2 399 aaPredicted RBP6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 KIAA1468Q9P260 1216 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 PLCH2O75038 1416 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 FAM135BQ49AJ0 1406 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 GAS8O95995 478 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 ATP2B2Q01814 1243 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 RNASELQ05823 741 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 GPATCH11Q8N954 259 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 RUNDC3BQ96NL0 473 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 LARSQ9P2J5 1176 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 UGGT2Q9NYU1 1516 aa6.9□□□□□ -1.3
PRPF4B-205ENST00000480058 PCP11498 1178 aaKnown RBP6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 CCDC152Q4G0S7 254 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 CCDC65Q8IXS2 484 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 CARD6Q9BX69 1037 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 ARHGEF11O15085 1522 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 EYA2O00167 538 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 DKC1O60832 514 aaKnown RBP eCLIP6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 MYL1P05976 194 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 MYSM1Q5VVJ2 828 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 FNBP4Q8N3X1 1017 aaPredicted RBP6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 TRERF1Q96PN7 1200 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 TMEM63CQ9P1W3 806 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 MTMR7Q9Y216 660 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 NPATQ14207 1427 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 HSPA6P17066 643 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 ATP11AP98196 1134 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 UBE4AQ14139 1066 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 CCDC14Q49A88 953 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 ATP6V0A2Q9Y487 856 aa6.9□□□□□ -1.31
PRPF4B-205ENST00000480058 DUOX2Q9NRD8 1548 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 ABCC4O15439 1325 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 CD109Q6YHK3 1445 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 MATR3P43243 847 aaKnown RBP eCLIP6.89□□□□□ -1.316e-6■■□□□ 12.4
PRPF4B-205ENST00000480058 DNM2P50570 870 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 STMN2Q93045 179 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 ZNF830Q96NB3 372 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 RAB17Q9H0T7 212 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 ANAPC4Q9UJX5 808 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 GRIN2AQ12879 1464 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 CCDC169A6NNP5 214 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 LUC7L3O95232 432 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 UBXN1Q04323 297 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 SLC9C2Q5TAH2 1124 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 P3H4Q92791 437 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 MPHOSPH6Q99547 160 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 CDC23Q9UJX2 597 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 SAR1BQ9Y6B6 198 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 CDK13Q14004 1512 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 DENND4BO75064 1496 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 KDM5DQ9BY66 1539 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 GOLGA8KD6RF30 607 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 GNA14O95837 355 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 IFIT1BQ5T764 474 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 MACROD2A1Z1Q3 448 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 KRT2P35908 639 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 GKAP1Q5VSY0 366 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 GALNT17Q6IS24 598 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 IWS1Q96ST2 819 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 MTA3Q9BTC8 594 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 PNMA2Q9UL42 364 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 ZNF215Q9UL58 517 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 RGS12O14924 1447 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 PTPRKQ15262 1439 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 IGSF3O75054 1194 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 ATP5JP18859 108 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 HAUS3Q68CZ6 603 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 EFCAB13Q8IY85 973 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 DCAF5Q96JK2 942 aa6.89□□□□□ -1.31
PRPF4B-205ENST00000480058 ADGRL2O95490 1459 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 H7C1D1 291 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 ZEB2O60315 1214 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 NOL3O60936 208 aaKnown RBP6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 LIG1P18858 919 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 KCNJ6P48051 423 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SARNPP82979 210 aaKnown RBP6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 FYB2Q5VWT5 728 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 KRT25Q7Z3Z0 450 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SYCP3Q8IZU3 236 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 TMEM87AQ8NBN3 555 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 PDLIM2Q96JY6 352 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 GSDMAQ96QA5 445 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 CUEDC2Q9H467 287 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 LZTFL1Q9NQ48 299 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 ACEP12821 1306 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 HIP1RO75146 1068 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 TRAPPC10P48553 1259 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SNX16P57768 344 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 INF2Q27J81 1249 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 CEP85LQ5SZL2 805 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 SEL1L2Q5TEA6 688 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 PPP1R2P3Q6NXS1 205 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 TTC6Q86TZ1 520 aa6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 ZSCAN29Q8IWY8 852 aaPredicted RBP6.88□□□□□ -1.31
PRPF4B-205ENST00000480058 DIS3L2Q8IYB7 885 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms