RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 KSR2Q6VAB6 950 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 TEKT2Q9UIF3 430 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 SMIM24O75264 130 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 PABPC4Q13310 644 aaKnown RBP eCLIP10.02□□□□□ -0.81
TTC3-216ENST00000479930 CHMP1BQ7LBR1 199 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 SEC62Q99442 399 aaKnown RBP10.02□□□□□ -0.81
TTC3-216ENST00000479930 SAMSN1Q9NSI8 373 aaKnown RBP10.02□□□□□ -0.81
TTC3-216ENST00000479930 DISP3Q9P2K9 1392 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 PPFIA2O75334 1257 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 IFI16Q16666 785 aaKnown RBP10.02□□□□□ -0.81
TTC3-216ENST00000479930 HERC4Q5GLZ8 1057 aaPredicted RBP10.02□□□□□ -0.81
TTC3-216ENST00000479930 C16orf62Q7Z3J2 963 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
TTC3-216ENST00000479930 GOLGA8CPA6NN73 597 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 YEATS4O95619 227 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 SYF2O95926 243 aaKnown RBP10.02□□□□□ -0.81
TTC3-216ENST00000479930 INAQ16352 499 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 MFSD4BQ5TF39 518 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 TSPY26PQ9H489 355 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 EEA1Q15075 1411 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 TRAPPC3LQ5T215 181 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 CCDC25Q86WR0 208 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 TMEM57Q8N5G2 664 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 TTC25Q96NG3 672 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 SAP30BPQ9UHR5 308 aaKnown RBP10.02□□□□□ -0.81
TTC3-216ENST00000479930 ATP6V0A2Q9Y487 856 aa10.02□□□□□ -0.81
TTC3-216ENST00000479930 GSTA1P08263 222 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 GSTA2P09210 222 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 METTL23Q86XA0 190 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 CENPAP49450 140 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 ARMC9Q7Z3E5 817 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 USHBP1Q8N6Y0 703 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.01□□□□□ -0.81
TTC3-216ENST00000479930 ATF5Q9Y2D1 282 aaPredicted RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 AGRPO00253 132 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 BLOC1S2Q6QNY1 142 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 PATL1Q86TB9 770 aaKnown RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 FCHSD1Q86WN1 690 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 ZGPATQ8N5A5 531 aaKnown RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 MMS19Q96T76 1030 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 MTIF3Q9H2K0 278 aaKnown RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 PDRG1Q9NUG6 133 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 FBXL21Q9UKT6 434 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 N4BP1O75113 896 aaKnown RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 OSBPP22059 807 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 ARHGAP25P42331 645 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 HACD3Q9P035 362 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 RSPH10B2B2RC85 870 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 RSPH10BP0C881 870 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 NAA30Q147X3 362 aaPredicted RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 KCNK9Q9NPC2 374 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 KIF28PB7ZC32 967 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 NAPAP54920 295 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 DEUP1Q05D60 604 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 CLUL1Q15846 466 aa10.01□□□□□ -0.81
TTC3-216ENST00000479930 GKAP1Q5VSY0 366 aaPredicted RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 SDCCAG8Q86SQ7 713 aaPredicted RBP10.01□□□□□ -0.81
TTC3-216ENST00000479930 SAT1P21673 171 aa10□□□□□ -0.81
TTC3-216ENST00000479930 MCM2P49736 904 aa10□□□□□ -0.81
TTC3-216ENST00000479930 NLRP7Q8WX94 980 aa10□□□□□ -0.81
TTC3-216ENST00000479930 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
TTC3-216ENST00000479930 TRERF1Q96PN7 1200 aa10□□□□□ -0.81
TTC3-216ENST00000479930 PARP2Q9UGN5 583 aa10□□□□□ -0.81
TTC3-216ENST00000479930 CDK19Q9BWU1 502 aa10□□□□□ -0.81
TTC3-216ENST00000479930 ARHGEF10LQ9HCE6 1279 aa10□□□□□ -0.81
TTC3-216ENST00000479930 UBA7P41226 1012 aa10□□□□□ -0.81
TTC3-216ENST00000479930 IQCB1Q15051 598 aa10□□□□□ -0.81
TTC3-216ENST00000479930 ANGPTL8Q6UXH0 198 aa10□□□□□ -0.81
TTC3-216ENST00000479930 CPSF3Q9UKF6 684 aaKnown RBP10□□□□□ -0.81
TTC3-216ENST00000479930 MIA2Q96PC5 1412 aa10□□□□□ -0.81
TTC3-216ENST00000479930 PDE6BP35913 854 aa10□□□□□ -0.81
TTC3-216ENST00000479930 NYXQ9GZU5 481 aa10□□□□□ -0.81
TTC3-216ENST00000479930 EXO5Q9H790 373 aa10□□□□□ -0.81
TTC3-216ENST00000479930 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
TTC3-216ENST00000479930 RAP1GDS1P52306 607 aa10□□□□□ -0.81
TTC3-216ENST00000479930 SULT6B1Q6IMI4 303 aa10□□□□□ -0.81
TTC3-216ENST00000479930 SNX19Q92543 992 aa10□□□□□ -0.81
TTC3-216ENST00000479930 GEMIN8Q9NWZ8 242 aaKnown RBP10□□□□□ -0.81
TTC3-216ENST00000479930 NUB1Q9Y5A7 615 aa10□□□□□ -0.81
TTC3-216ENST00000479930 RILPL1Q5EBL4 403 aa10□□□□□ -0.81
TTC3-216ENST00000479930 TMEM132EQ6IEE7 984 aa10□□□□□ -0.81
TTC3-216ENST00000479930 NUDT18Q6ZVK8 323 aa10□□□□□ -0.81
TTC3-216ENST00000479930 SCYL1Q96KG9 808 aa10□□□□□ -0.81
TTC3-216ENST00000479930 C6orf203Q9P0P8 240 aaPredicted RBP10□□□□□ -0.81
TTC3-216ENST00000479930 CDC45O75419 566 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 DDAH1O94760 285 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 HOXD10P28358 340 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 DDB1Q16531 1140 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 JADE1Q6IE81 842 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 HS2ST1Q7LGA3 356 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 HVCN1Q96D96 273 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 ERICH4A6NGS2 130 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 MYL3P08590 195 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 SFPQP23246 707 aaKnown RBP eCLIP9.99□□□□□ -0.812e-13■■■■□ 26
TTC3-216ENST00000479930 MCM7P33993 719 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 MAP9Q49MG5 647 aa9.99□□□□□ -0.81
TTC3-216ENST00000479930 DDX53Q86TM3 631 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms