RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 CRNKL1Q9BZJ0 848 aaKnown RBP16.95■□□□□ 0.3
RPP40-205ENST00000479782 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
RPP40-205ENST00000479782 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
RPP40-205ENST00000479782 SERPINA10Q9UK55 444 aa16.95■□□□□ 0.3
RPP40-205ENST00000479782 RPS12P25398 132 aaKnown RBP16.94■□□□□ 0.3
RPP40-205ENST00000479782 BTDP43251 543 aa16.94■□□□□ 0.3
RPP40-205ENST00000479782 DYNLL1P63167 89 aaKnown RBP16.94■□□□□ 0.3
RPP40-205ENST00000479782 ALX1Q15699 326 aa16.94■□□□□ 0.3
RPP40-205ENST00000479782 NACAP1Q9BZK3 213 aa16.94■□□□□ 0.3
RPP40-205ENST00000479782 RBM19Q9Y4C8 960 aaKnown RBP16.94■□□□□ 0.3
RPP40-205ENST00000479782 DAGLAQ9Y4D2 1042 aa16.94■□□□□ 0.3
RPP40-205ENST00000479782 SLC4A4Q9Y6R1 1079 aa16.94■□□□□ 0.3
RPP40-205ENST00000479782 FOXP2O15409 715 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 APPP05067 770 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 CRKP46108 304 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 GIMAP6Q6P9H5 292 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 KCNB2Q92953 911 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 IL17RAQ96F46 866 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 ZDHHC15Q96MV8 337 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 LAMA4Q16363 1823 aa16.93■□□□□ 0.3
RPP40-205ENST00000479782 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
RPP40-205ENST00000479782 FOCADQ5VW36 1801 aa16.92■□□□□ 0.3
RPP40-205ENST00000479782 GSG1L2A8MUP6 293 aa16.92■□□□□ 0.3
RPP40-205ENST00000479782 ZKSCAN1P17029 563 aaPredicted RBP16.92■□□□□ 0.3
RPP40-205ENST00000479782 SCNN1DP51172 638 aa16.92■□□□□ 0.3
RPP40-205ENST00000479782 CREB3L3Q68CJ9 461 aa16.92■□□□□ 0.3
RPP40-205ENST00000479782 IFNL3Q8IZI9 196 aa16.92■□□□□ 0.3
RPP40-205ENST00000479782 OGFOD1Q8N543 542 aa16.92■□□□□ 0.3
RPP40-205ENST00000479782 ATP8A2Q9NTI2 1148 aa16.92■□□□□ 0.3
RPP40-205ENST00000479782 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
RPP40-205ENST00000479782 CDK5RAP2Q96SN8 1893 aa16.91■□□□□ 0.3
RPP40-205ENST00000479782 SLC27A2O14975 620 aa16.91■□□□□ 0.3
RPP40-205ENST00000479782 FGAP02671 866 aa16.91■□□□□ 0.3
RPP40-205ENST00000479782 IMMTQ16891 758 aaKnown RBP16.91■□□□□ 0.3
RPP40-205ENST00000479782 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
RPP40-205ENST00000479782 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
RPP40-205ENST00000479782 NAPBQ9H115 298 aa16.91■□□□□ 0.3
RPP40-205ENST00000479782 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
RPP40-205ENST00000479782 PRKAB2O43741 272 aa16.9■□□□□ 0.3
RPP40-205ENST00000479782 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
RPP40-205ENST00000479782 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
RPP40-205ENST00000479782 SH3RF3Q8TEJ3 882 aaPredicted RBP16.9■□□□□ 0.3
RPP40-205ENST00000479782 DPF2Q92785 391 aa16.9■□□□□ 0.3
RPP40-205ENST00000479782 KIF2CQ99661 725 aa16.9■□□□□ 0.3
RPP40-205ENST00000479782 RNF181Q9P0P0 153 aa16.9■□□□□ 0.3
RPP40-205ENST00000479782 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
RPP40-205ENST00000479782 SNX14Q9Y5W7 946 aa16.9■□□□□ 0.3
RPP40-205ENST00000479782 NAV1Q8NEY1 1877 aa16.9■□□□□ 0.3
RPP40-205ENST00000479782 TDO2P48775 406 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 RBM5P52756 815 aaKnown RBP eCLIP16.89■□□□□ 0.29
RPP40-205ENST00000479782 RHBDL3P58872 404 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 KRT32Q14532 448 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 APOBEC3HQ6NTF7 200 aaKnown RBP16.89■□□□□ 0.29
RPP40-205ENST00000479782 GPC2Q8N158 579 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 MTMR14Q8NCE2 650 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 PALD1Q9ULE6 856 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 ZC3H4Q9UPT8 1303 aaKnown RBP16.89■□□□□ 0.29
RPP40-205ENST00000479782 LAMB1P07942 1786 aa16.89■□□□□ 0.29
RPP40-205ENST00000479782 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
RPP40-205ENST00000479782 ZNF213O14771 459 aa16.88■□□□□ 0.29
RPP40-205ENST00000479782 CYP21A2P08686 494 aa16.88■□□□□ 0.29
RPP40-205ENST00000479782 USP5P45974 858 aa16.88■□□□□ 0.29
RPP40-205ENST00000479782 RABEP1Q15276 862 aa16.88■□□□□ 0.29
RPP40-205ENST00000479782 CFAP100Q494V2 611 aa16.88■□□□□ 0.29
RPP40-205ENST00000479782 C9orf131Q5VYM1 1079 aa16.88■□□□□ 0.29
RPP40-205ENST00000479782 TEX11Q8IYF3 940 aa16.88■□□□□ 0.29
RPP40-205ENST00000479782 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
RPP40-205ENST00000479782 DCP1AQ9NPI6 582 aaPredicted RBP16.88■□□□□ 0.29
RPP40-205ENST00000479782 PSMA5P28066 241 aa16.87■□□□□ 0.29
RPP40-205ENST00000479782 ANP32AP39687 249 aaKnown RBP16.87■□□□□ 0.29
RPP40-205ENST00000479782 ZNF280AP59817 542 aaPredicted RBP16.87■□□□□ 0.29
RPP40-205ENST00000479782 USP40Q9NVE5 1235 aa16.87■□□□□ 0.29
RPP40-205ENST00000479782 ARPP21Q9UBL0 812 aaPredicted RBP16.87■□□□□ 0.29
RPP40-205ENST00000479782 MKRN1Q9UHC7 482 aaKnown RBP16.87■□□□□ 0.29
RPP40-205ENST00000479782 GJA3Q9Y6H8 435 aa16.87■□□□□ 0.29
RPP40-205ENST00000479782 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
RPP40-205ENST00000479782 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
RPP40-205ENST00000479782 GMPSP49915 693 aaPredicted RBP16.86■□□□□ 0.29
RPP40-205ENST00000479782 DLGAP5Q15398 846 aa16.86■□□□□ 0.29
RPP40-205ENST00000479782 SBK1Q52WX2 424 aa16.86■□□□□ 0.29
RPP40-205ENST00000479782 CDC42EP5Q6NZY7 148 aa16.86■□□□□ 0.29
RPP40-205ENST00000479782 AMOTL1Q8IY63 956 aa16.86■□□□□ 0.29
RPP40-205ENST00000479782 TGFBRAP1Q8WUH2 860 aa16.86■□□□□ 0.29
RPP40-205ENST00000479782 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
RPP40-205ENST00000479782 BAZ2AQ9UIF9 1905 aaKnown RBP16.86■□□□□ 0.29
RPP40-205ENST00000479782 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
RPP40-205ENST00000479782 MYOZ2Q9NPC6 264 aa16.85■□□□□ 0.29
RPP40-205ENST00000479782 ANAPC4Q9UJX5 808 aa16.85■□□□□ 0.29
RPP40-205ENST00000479782 FLT1P17948 1338 aa16.85■□□□□ 0.29
RPP40-205ENST00000479782 WDHD1O75717 1129 aaPredicted RBP16.84■□□□□ 0.29
RPP40-205ENST00000479782 PPARAQ07869 468 aa16.84■□□□□ 0.29
RPP40-205ENST00000479782 CTR9Q6PD62 1173 aa16.84■□□□□ 0.29
RPP40-205ENST00000479782 MICALL2Q8IY33 904 aa16.84■□□□□ 0.29
RPP40-205ENST00000479782 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
RPP40-205ENST00000479782 IDI2Q9BXS1 227 aa16.84■□□□□ 0.29
RPP40-205ENST00000479782 MCM9Q9NXL9 1143 aa16.84■□□□□ 0.29
RPP40-205ENST00000479782 MYH1P12882 1939 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms