RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 RTKN2Q8IZC4 609 aa5.3□□□□□ -1.56
COPS7B-220ENST00000479430 MRPL50Q8N5N7 158 aaKnown RBP5.3□□□□□ -1.56
COPS7B-220ENST00000479430 GIPC2Q8TF65 315 aa5.3□□□□□ -1.56
COPS7B-220ENST00000479430 PHACTR3Q96KR7 559 aa5.3□□□□□ -1.56
COPS7B-220ENST00000479430 THUMPD2Q9BTF0 503 aaKnown RBP5.3□□□□□ -1.56
COPS7B-220ENST00000479430 GPRC5DQ9NZD1 345 aa5.3□□□□□ -1.56
COPS7B-220ENST00000479430 FZD1Q9UP38 647 aa5.3□□□□□ -1.56
COPS7B-220ENST00000479430 NPC1L1Q9UHC9 1359 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 LAMB4A4D0S4 1761 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 UBN2Q6ZU65 1347 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 BTBD11A6QL63 1104 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 PPEF1O14829 653 aaPredicted RBP5.29□□□□□ -1.56
COPS7B-220ENST00000479430 ABL1P00519 1130 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 ANXA1P04083 346 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 CCNYL3P0C7X3 344 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 MYL6BP14649 208 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 ZNF157P51786 506 aaPredicted RBP5.29□□□□□ -1.56
COPS7B-220ENST00000479430 MCCD1P59942 119 aaPredicted RBP5.29□□□□□ -1.56
COPS7B-220ENST00000479430 PPP4CP60510 307 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 PRKG1Q13976 671 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 SWI5Q1ZZU3 235 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 SOGA3Q5TF21 947 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 SUSD4Q5VX71 490 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 USP50Q70EL3 339 aaPredicted RBP5.29□□□□□ -1.56
COPS7B-220ENST00000479430 CCDC85AQ96PX6 553 aaPredicted RBP5.29□□□□□ -1.56
COPS7B-220ENST00000479430 CSRNP1Q96S65 589 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 DBNDD1Q9H9R9 158 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 ADARB2Q9NS39 739 aaKnown RBP5.29□□□□□ -1.56
COPS7B-220ENST00000479430 CNOT7Q9UIV1 285 aaKnown RBP5.29□□□□□ -1.56
COPS7B-220ENST00000479430 NOD1Q9Y239 953 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 RRP7AQ9Y3A4 280 aaKnown RBP5.29□□□□□ -1.56
COPS7B-220ENST00000479430 ANKRD36CQ5JPF3 1778 aa5.29□□□□□ -1.56
COPS7B-220ENST00000479430 DDX60Q8IY21 1712 aaKnown RBP5.28□□□□□ -1.56
COPS7B-220ENST00000479430 SFI1A8K8P3 1242 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 HSPA5P11021 654 aaKnown RBP5.28□□□□□ -1.56
COPS7B-220ENST00000479430 OCLNQ16625 522 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 PTCRAQ6ISU1 281 aaPredicted RBP5.28□□□□□ -1.56
COPS7B-220ENST00000479430 RGMBQ6NW40 437 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 TPTE2Q6XPS3 522 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 TAS1R3Q7RTX0 852 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 NPAS4Q8IUM7 802 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 ARMC2Q8NEN0 867 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 C1orf216Q8TAB5 229 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 ZNF296Q8WUU4 475 aaPredicted RBP5.28□□□□□ -1.56
COPS7B-220ENST00000479430 RPGRQ92834 1020 aaKnown RBP5.28□□□□□ -1.56
COPS7B-220ENST00000479430 FMNL2Q96PY5 1086 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 NUDT12Q9BQG2 462 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 ARHGAP9Q9BRR9 750 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 GBA2Q9HCG7 927 aaPredicted RBP5.28□□□□□ -1.56
COPS7B-220ENST00000479430 PCDHB3Q9Y5E6 796 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 DUOX1Q9NRD9 1551 aa5.28□□□□□ -1.56
COPS7B-220ENST00000479430 KLRG2A4D1S0 409 aaPredicted RBP5.27□□□□□ -1.57
COPS7B-220ENST00000479430 GNAT3A8MTJ3 354 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 UBE2Q2LH0YL09 131 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 PSMD14O00487 310 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 NR1I2O75469 434 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 HCLS1P14317 486 aaPredicted RBP5.27□□□□□ -1.57
COPS7B-220ENST00000479430 ALDH1B1P30837 517 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 PBX2P40425 430 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 ATP1A2P50993 1020 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 FXR1P51114 621 aaKnown RBP eCLIP5.27□□□□□ -1.57
COPS7B-220ENST00000479430 CAP1Q01518 475 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 ZNF211Q13398 564 aaPredicted RBP5.27□□□□□ -1.57
COPS7B-220ENST00000479430 ECM1Q16610 540 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 OXLD1Q5BKU9 147 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 CCDC102BQ68D86 513 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 CAPN12Q6ZSI9 719 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 KRT26Q7Z3Y9 468 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 CTU1Q7Z7A3 348 aaKnown RBP5.27□□□□□ -1.57
COPS7B-220ENST00000479430 ZBTB33Q86T24 672 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 TRIM50Q86XT4 487 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 GAS2L2Q8NHY3 880 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 PSMD1Q99460 953 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 PRR14Q9BWN1 585 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 PRDM9Q9NQV7 894 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 HDAC9Q9UKV0 1011 aa5.27□□□□□ -1.57
COPS7B-220ENST00000479430 ABCC4O15439 1325 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 WTIPA6NIX2 430 aaPredicted RBP5.26□□□□□ -1.57
COPS7B-220ENST00000479430 DIAPH1O60610 1272 aaKnown RBP5.26□□□□□ -1.57
COPS7B-220ENST00000479430 DXOO77932 396 aaKnown RBP5.26□□□□□ -1.57
COPS7B-220ENST00000479430 EN2P19622 333 aaPredicted RBP5.26□□□□□ -1.57
COPS7B-220ENST00000479430 BCAMP50895 628 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 SEC13P55735 322 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 GTF2IP78347 998 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 NOGQ13253 232 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 CDC37L1Q7L3B6 337 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 RASAL3Q86YV0 1011 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 SIX5Q8N196 739 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 ZNF687Q8N1G0 1237 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 GPKOWQ92917 476 aaPredicted RBP eCLIP5.26□□□□□ -1.57
COPS7B-220ENST00000479430 RBM17Q96I25 401 aaKnown RBP5.26□□□□□ -1.57
COPS7B-220ENST00000479430 SPSB2Q99619 263 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 HINFPQ9BQA5 517 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 MXD3Q9BW11 206 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 CXXC1Q9P0U4 656 aaPredicted RBP5.26□□□□□ -1.57
COPS7B-220ENST00000479430 SEPT3Q9UH03 358 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 ZNRF3Q9ULT6 936 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 PDZRN3Q9UPQ7 1066 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 DOLKQ9UPQ8 538 aa5.26□□□□□ -1.57
COPS7B-220ENST00000479430 PCDHGA11Q9Y5H2 935 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms