RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SERPINA10Q9UK55 444 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 TAF6LQ9Y6J9 622 aa15.75■□□□□ 0.11
CHD3-210ENST00000479080 GSG1L2A8MUP6 293 aa15.74■□□□□ 0.11
CHD3-210ENST00000479080 USP17L8P0C7I0 530 aa15.74■□□□□ 0.11
CHD3-210ENST00000479080 HSPD1P10809 573 aaKnown RBP15.74■□□□□ 0.11
CHD3-210ENST00000479080 EVX2Q03828 476 aa15.74■□□□□ 0.11
CHD3-210ENST00000479080 CDC42EP5Q6NZY7 148 aa15.74■□□□□ 0.11
CHD3-210ENST00000479080 SDR42E1Q8WUS8 393 aa15.74■□□□□ 0.11
CHD3-210ENST00000479080 TEKT1Q969V4 418 aa15.74■□□□□ 0.11
CHD3-210ENST00000479080 AIDAQ96BJ3 306 aa15.74■□□□□ 0.11
CHD3-210ENST00000479080 PRMT6Q96LA8 375 aaPredicted RBP15.74■□□□□ 0.11
CHD3-210ENST00000479080 MKRN1Q9UHC7 482 aaKnown RBP15.74■□□□□ 0.11
CHD3-210ENST00000479080 ZC3H4Q9UPT8 1303 aaKnown RBP15.73■□□□□ 0.11
CHD3-210ENST00000479080 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 SMIM22K7EJ46 135 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 LDHCP07864 332 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 MTMR14Q8NCE2 650 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 MAP4K1Q92918 833 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 DDX4Q9NQI0 724 aaKnown RBP15.73■□□□□ 0.11
CHD3-210ENST00000479080 PALD1Q9ULE6 856 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 CDK5RAP2Q96SN8 1893 aa15.73■□□□□ 0.11
CHD3-210ENST00000479080 ASTN2O75129 1339 aaPredicted RBP15.72■□□□□ 0.11
CHD3-210ENST00000479080 WDHD1O75717 1129 aaPredicted RBP15.72■□□□□ 0.11
CHD3-210ENST00000479080 EPS15P42566 896 aa15.72■□□□□ 0.11
CHD3-210ENST00000479080 TRPM4Q8TD43 1214 aa15.72■□□□□ 0.11
CHD3-210ENST00000479080 DSCC1Q9BVC3 393 aa15.72■□□□□ 0.11
CHD3-210ENST00000479080 GPRC5DQ9NZD1 345 aa15.72■□□□□ 0.11
CHD3-210ENST00000479080 CNOT7Q9UIV1 285 aaKnown RBP15.72■□□□□ 0.11
CHD3-210ENST00000479080 RBM8AQ9Y5S9 174 aaKnown RBP15.72■□□□□ 0.11
CHD3-210ENST00000479080 TACC3Q9Y6A5 838 aa15.72■□□□□ 0.11
CHD3-210ENST00000479080 SLC4A4Q9Y6R1 1079 aa15.72■□□□□ 0.11
CHD3-210ENST00000479080 RPAP1Q9BWH6 1393 aaPredicted RBP15.72■□□□□ 0.11
CHD3-210ENST00000479080 POTECB2RU33 542 aa15.71■□□□□ 0.11
CHD3-210ENST00000479080 NFIAQ12857 509 aa15.71■□□□□ 0.11
CHD3-210ENST00000479080 COL9A3Q14050 684 aaPredicted RBP15.71■□□□□ 0.11
CHD3-210ENST00000479080 SAMD7Q7Z3H4 446 aa15.71■□□□□ 0.11
CHD3-210ENST00000479080 L3MBTL3Q96JM7 780 aaPredicted RBP15.71■□□□□ 0.11
CHD3-210ENST00000479080 NBPF3Q9H094 633 aa15.71■□□□□ 0.11
CHD3-210ENST00000479080 TDRD3Q9H7E2 651 aaKnown RBP15.71■□□□□ 0.11
CHD3-210ENST00000479080 MYOZ2Q9NPC6 264 aa15.71■□□□□ 0.11
CHD3-210ENST00000479080 FOCADQ5VW36 1801 aa15.71■□□□□ 0.1
CHD3-210ENST00000479080 PATL2C9JE40 543 aaKnown RBP15.7■□□□□ 0.1
CHD3-210ENST00000479080 REC8O95072 547 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 HIRAP54198 1017 aaPredicted RBP15.7■□□□□ 0.1
CHD3-210ENST00000479080 CACNB3P54284 484 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 NECTIN1Q15223 517 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 ALX1Q15699 326 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 NBPF9Q3BBW0 867 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 RASEFQ8IZ41 740 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 KCNB2Q92953 911 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 TBC1D32Q96NH3 1257 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 DCP1AQ9NPI6 582 aaPredicted RBP15.7■□□□□ 0.1
CHD3-210ENST00000479080 USP40Q9NVE5 1235 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 FAM198AQ9UFP1 575 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 WDR90Q96KV7 1748 aa15.7■□□□□ 0.1
CHD3-210ENST00000479080 FLT1P17948 1338 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 NAV1Q8NEY1 1877 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 ECM29Q5VYK3 1845 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 WNT10BO00744 389 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 FGAP02671 866 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 HSPA4P34932 840 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 TBC1D10BQ4KMP7 808 aaPredicted RBP15.69■□□□□ 0.1
CHD3-210ENST00000479080 ZFPM1Q8IX07 1006 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 TEX11Q8IYF3 940 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 IFNL3Q8IZI9 196 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 NKX2-3Q8TAU0 364 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 TGFBRAP1Q8WUH2 860 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 KIF2CQ99661 725 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 HDAC9Q9UKV0 1011 aa15.69■□□□□ 0.1
CHD3-210ENST00000479080 ZMYM6O95789 1325 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 CNTNAP1P78357 1384 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 CYP2D7A0A087X1C5 515 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 CLRN2A0PK11 232 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 SLC27A2O14975 620 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
CHD3-210ENST00000479080 BAG3O95817 575 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 CYP21A2P08686 494 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 CYP2D6P10635 497 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 RBM25P49756 843 aaKnown RBP15.68■□□□□ 0.1
CHD3-210ENST00000479080 RBM5P52756 815 aaKnown RBP eCLIP15.68■□□□□ 0.1
CHD3-210ENST00000479080 DLGAP5Q15398 846 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 KIF4BQ2VIQ3 1234 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 MAPKAPK5Q8IW41 473 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 IL17RAQ96F46 866 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 CRNKL1Q9BZJ0 848 aaKnown RBP15.68■□□□□ 0.1
CHD3-210ENST00000479080 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 ZNF70Q9UC06 446 aaPredicted RBP15.68■□□□□ 0.1
CHD3-210ENST00000479080 LAMA4Q16363 1823 aa15.68■□□□□ 0.1
CHD3-210ENST00000479080 SIPA1L1O43166 1804 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 GNAT2P19087 354 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
CHD3-210ENST00000479080 CREB3L3Q68CJ9 461 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 STOX1Q6ZVD7 989 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 SH3BP5LQ7L8J4 393 aa15.67■□□□□ 0.1
CHD3-210ENST00000479080 TBC1D10CQ8IV04 446 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms