RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 H7C1D1 291 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 BAG3O95817 575 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 MMP14P50281 582 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 ZDHHC15Q96MV8 337 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 RIOK1Q9BRS2 568 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 MYOZ2Q9NPC6 264 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 WDR90Q96KV7 1748 aa16.38■□□□□ 0.21
SMARCAL1-211ENST00000479008 LMOD1P29536 600 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-211ENST00000479008 MFAP1P55081 439 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-211ENST00000479008 PPP4CP60510 307 aa16.37■□□□□ 0.21
SMARCAL1-211ENST00000479008 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-211ENST00000479008 APOBEC3HQ6NTF7 200 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-211ENST00000479008 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-211ENST00000479008 PLCG2P16885 1265 aa16.36■□□□□ 0.21
SMARCAL1-211ENST00000479008 EPS15P42566 896 aa16.36■□□□□ 0.21
SMARCAL1-211ENST00000479008 SAMD7Q7Z3H4 446 aa16.36■□□□□ 0.21
SMARCAL1-211ENST00000479008 MTMR14Q8NCE2 650 aa16.36■□□□□ 0.21
SMARCAL1-211ENST00000479008 SH3RF3Q8TEJ3 882 aaPredicted RBP16.36■□□□□ 0.21
SMARCAL1-211ENST00000479008 L3MBTL3Q96JM7 780 aaPredicted RBP16.36■□□□□ 0.21
SMARCAL1-211ENST00000479008 PRMT6Q96LA8 375 aaPredicted RBP16.36■□□□□ 0.21
SMARCAL1-211ENST00000479008 MYH1P12882 1939 aa16.36■□□□□ 0.21
SMARCAL1-211ENST00000479008 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 EGFRP00533 1210 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 KIF4BQ2VIQ3 1234 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 CDC42EP5Q6NZY7 148 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 KIAA1211Q6ZU35 1233 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 CRNKL1Q9BZJ0 848 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 TDRD3Q9H7E2 651 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 ANO2Q9NQ90 1003 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 SLC4A4Q9Y6R1 1079 aa16.35■□□□□ 0.21
SMARCAL1-211ENST00000479008 PRKAB2O43741 272 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 SEC24BO95487 1268 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 GNAT2P19087 354 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 RHBDL3P58872 404 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 VPS53Q5VIR6 699 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 TEX11Q8IYF3 940 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 TRPM4Q8TD43 1214 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 ZBED3Q96IU2 234 aaPredicted RBP16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 BACH2Q9BYV9 841 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 HACL1Q9UJ83 578 aa16.34■□□□□ 0.21
SMARCAL1-211ENST00000479008 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.21
SMARCAL1-211ENST00000479008 WNT10BO00744 389 aa16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 REC8O95072 547 aa16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 PTH1RQ03431 593 aa16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 SDR42E1Q8WUS8 393 aa16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 LSG1Q9H089 658 aaKnown RBP16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 ADARB2Q9NS39 739 aaKnown RBP16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 DDX60LQ5H9U9 1706 aaKnown RBP16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 LAMB1P07942 1786 aa16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 LAMA4Q16363 1823 aa16.33■□□□□ 0.2
SMARCAL1-211ENST00000479008 CLRN2A0PK11 232 aa16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 FOXP2O15409 715 aa16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 MYO1BO43795 1136 aa16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 APPP05067 770 aa16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 USP5P45974 858 aa16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 CACNB3P54284 484 aa16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 TGFBRAP1Q8WUH2 860 aa16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 TMOD2Q9NZR1 351 aa16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
SMARCAL1-211ENST00000479008 IQCA1LA6NCM1 817 aa16.31■□□□□ 0.2
SMARCAL1-211ENST00000479008 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
SMARCAL1-211ENST00000479008 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
SMARCAL1-211ENST00000479008 EPHX2P34913 555 aa16.31■□□□□ 0.2
SMARCAL1-211ENST00000479008 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
SMARCAL1-211ENST00000479008 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
SMARCAL1-211ENST00000479008 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
SMARCAL1-211ENST00000479008 RPAP1Q9BWH6 1393 aaPredicted RBP16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 ASTN2O75129 1339 aaPredicted RBP16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 POTECB2RU33 542 aa16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 HIRAP54198 1017 aaPredicted RBP16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 PICALMQ13492 652 aa16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 IFNL3Q8IZI9 196 aa16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 ATP8A2Q9NTI2 1148 aa16.3■□□□□ 0.2
SMARCAL1-211ENST00000479008 FLT1P17948 1338 aa16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 TDO2P48775 406 aa16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 NFIAQ12857 509 aa16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 ZNF526Q8TF50 670 aaPredicted RBP16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 IDI2Q9BXS1 227 aa16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 NAPBQ9H115 298 aa16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 TAF1DQ9H5J8 278 aaPredicted RBP16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 DCP1AQ9NPI6 582 aaPredicted RBP16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 DDX4Q9NQI0 724 aaKnown RBP16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 RBM8AQ9Y5S9 174 aaKnown RBP16.29■□□□□ 0.2
SMARCAL1-211ENST00000479008 TCP10L2B9ZVM9 353 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms