RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	CELF2	O95319	508 aa	Known RBP	11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	LDHC	P07864	332 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	MX1	P20591	662 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	NUCB1	Q02818	461 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	NAA16	Q6N069	864 aa	Predicted RBP	11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	CDC42EP5	Q6NZY7	148 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	PI4K2B	Q8TCG2	481 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	DEFB129	Q9H1M3	183 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	PAG1	Q9NWQ8	432 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	TMOD2	Q9NZR1	351 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	CNTNAP1	P78357	1384 aa		11.54	□□□□□ -0.56
SFI1-222	ENST00000478887	MAP4K4	O95819	1239 aa	Predicted RBP	11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	BTD	P43251	543 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	RHBDL3	P58872	404 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	MAP3K12	Q12852	859 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	RASA3	Q14644	834 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	TSHZ3	Q63HK5	1081 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	FAM83A	Q86UY5	434 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	CHD1L	Q86WJ1	897 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	EDC3	Q96F86	508 aa	Known RBP	11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	IDI2	Q9BXS1	227 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	STAP2	Q9UGK3	403 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	PAPPA2	Q9BXP8	1791 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	TRPM7	Q96QT4	1865 aa		11.53	□□□□□ -0.56
SFI1-222	ENST00000478887	TCP10L2	B9ZVM9	353 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	ERC2	O15083	957 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	GLRX3	O76003	335 aa	Known RBP	11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	TNNI2	P48788	182 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	CACNB3	P54284	484 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	FKBP1B	P68106	108 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	HTRA3	P83110	453 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	ADGRA1	Q86SQ6	560 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	TEPSIN	Q96N21	525 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	LNPK	Q9C0E8	428 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	ZNF408	Q9H9D4	720 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	GBA2	Q9HCG7	927 aa	Predicted RBP	11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	USP40	Q9NVE5	1235 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	TLL2	Q9Y6L7	1015 aa		11.52	□□□□□ -0.57
SFI1-222	ENST00000478887	MYH2	Q9UKX2	1941 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	RASSF10	A6NK89	507 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	WDHD1	O75717	1129 aa	Predicted RBP	11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	PDE6A	P16499	860 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	CYP7A1	P22680	504 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	NF2	P35240	595 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	PDE1A	P54750	535 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	PPP4C	P60510	307 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	NFIA	Q12857	509 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	PRAMEF18	Q5VWM3	479 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	B4GALNT3	Q6L9W6	998 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	SAPCD2	Q86UD0	394 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	CERS3	Q8IU89	383 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	MAGEB6	Q8N7X4	407 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	TMEM39B	Q9GZU3	492 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	FAM198A	Q9UFP1	575 aa		11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	COL2A1	P02458	1487 aa	Predicted RBP	11.51	□□□□□ -0.57
SFI1-222	ENST00000478887	TCRBV5S4A2T	A0A5A2	114 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	ENTPD3	O75355	529 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	BAG3	O95817	575 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	NEFL	P07196	543 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	PLCG2	P16885	1265 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	SLC9C2	Q5TAH2	1124 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	CDAN1	Q8IWY9	1227 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	C2orf69	Q8N8R5	385 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	KBTBD3	Q8NAB2	608 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	FAM151A	Q8WW52	585 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	HHIPL1	Q96JK4	782 aa		11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	NOL10	Q9BSC4	688 aa	Known RBP	11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	DDX4	Q9NQI0	724 aa	Known RBP	11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	ABT1	Q9ULW3	272 aa	Known RBP	11.5	□□□□□ -0.57
SFI1-222	ENST00000478887	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	ADD2	P35612	726 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	RGS3	P49796	1198 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	MAP3K11	Q16584	847 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	SUPT20HL1	Q3ZLR7	823 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	PLEKHM2	Q8IWE5	1019 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	DNAJC5G	Q8N7S2	189 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	RIOK1	Q9BRS2	568 aa	Known RBP	11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	OSBPL3	Q9H4L5	887 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	ZNF532	Q9HCE3	1301 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	ATRNL1	Q5VV63	1379 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	THSD7B	Q9C0I4	1608 aa		11.49	□□□□□ -0.57
SFI1-222	ENST00000478887	POLR2A	P24928	1970 aa	Known RBP	11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	HUNK	P57058	714 aa		11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	DYNLL1	P63167	89 aa	Known RBP	11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	TCP10	Q12799	353 aa		11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	UBE3C	Q15386	1083 aa		11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	ZSCAN25	Q6NSZ9	544 aa		11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	TEX11	Q8IYF3	940 aa		11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	MIGA1	Q8NAN2	632 aa		11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	KLRG1	Q96E93	195 aa		11.48	□□□□□ -0.57
SFI1-222	ENST00000478887	FLT1	P17948	1338 aa		11.47	□□□□□ -0.57
SFI1-222	ENST00000478887	PPP1R12B	O60237	982 aa	Predicted RBP	11.47	□□□□□ -0.57
SFI1-222	ENST00000478887	PDE4A	P27815	886 aa		11.47	□□□□□ -0.57
SFI1-222	ENST00000478887	DEFB115	Q30KQ5	88 aa		11.47	□□□□□ -0.57
SFI1-222	ENST00000478887	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms