RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 PPP1R9AQ9ULJ8 1098 aa7□□□□□ -1.29
HPS3-205ENST00000478525 SLC5A6Q9Y289 635 aa7□□□□□ -1.29
HPS3-205ENST00000478525 ICMTO60725 284 aa6.99□□□□□ -1.29
HPS3-205ENST00000478525 ORC1Q13415 861 aa6.99□□□□□ -1.29
HPS3-205ENST00000478525 OGFOD3Q6PK18 319 aa6.99□□□□□ -1.29
HPS3-205ENST00000478525 EHD4Q9H223 541 aa6.99□□□□□ -1.29
HPS3-205ENST00000478525 ABCB6Q9NP58 842 aa6.99□□□□□ -1.29
HPS3-205ENST00000478525 H3BRB1 525 aa6.98□□□□□ -1.29
HPS3-205ENST00000478525 TMPRSS2O15393 492 aa6.98□□□□□ -1.29
HPS3-205ENST00000478525 PLCL1Q15111 1095 aa6.98□□□□□ -1.29
HPS3-205ENST00000478525 ECM1Q16610 540 aa6.98□□□□□ -1.29
HPS3-205ENST00000478525 SPRED2Q7Z698 418 aa6.98□□□□□ -1.29
HPS3-205ENST00000478525 TUT1Q9H6E5 874 aaKnown RBP6.98□□□□□ -1.29
HPS3-205ENST00000478525 EGFL7Q9UHF1 273 aa6.98□□□□□ -1.29
HPS3-205ENST00000478525 BRPF3Q9ULD4 1205 aa6.98□□□□□ -1.29
HPS3-205ENST00000478525 SERPINB4P48594 390 aa6.97□□□□□ -1.29
HPS3-205ENST00000478525 CDK5R2Q13319 367 aa6.97□□□□□ -1.29
HPS3-205ENST00000478525 AP3B2Q13367 1082 aa6.97□□□□□ -1.29
HPS3-205ENST00000478525 ZNF792Q3KQV3 632 aa6.97□□□□□ -1.29
HPS3-205ENST00000478525 WDR89Q96FK6 387 aaPredicted RBP6.97□□□□□ -1.29
HPS3-205ENST00000478525 SYNGAP1Q96PV0 1343 aa6.97□□□□□ -1.29
HPS3-205ENST00000478525 CPNE3O75131 537 aaKnown RBP6.96□□□□□ -1.3
HPS3-205ENST00000478525 LIG1P18858 919 aa6.96□□□□□ -1.3
HPS3-205ENST00000478525 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
HPS3-205ENST00000478525 PTPN12Q05209 780 aaKnown RBP6.96□□□□□ -1.3
HPS3-205ENST00000478525 PRPF40BQ6NWY9 871 aaKnown RBP6.96□□□□□ -1.3
HPS3-205ENST00000478525 STK11IPQ8N1F8 1099 aa6.96□□□□□ -1.3
HPS3-205ENST00000478525 PLD6Q8N2A8 252 aaKnown RBP6.96□□□□□ -1.3
HPS3-205ENST00000478525 FAM181AQ8N9Y4 354 aa6.96□□□□□ -1.3
HPS3-205ENST00000478525 FAM129BQ96TA1 746 aa6.96□□□□□ -1.3
HPS3-205ENST00000478525 CCDC86Q9H6F5 360 aaKnown RBP6.96□□□□□ -1.3
HPS3-205ENST00000478525 C1orf115Q9H7X2 142 aa6.96□□□□□ -1.3
HPS3-205ENST00000478525 CRIM1Q9NZV1 1036 aa6.96□□□□□ -1.3
HPS3-205ENST00000478525 U3KQE9 123 aa6.96□□□□□ -1.3
HPS3-205ENST00000478525 NEFLP07196 543 aa6.95□□□□□ -1.3
HPS3-205ENST00000478525 FAM87AP0C7U9 286 aa6.95□□□□□ -1.3
HPS3-205ENST00000478525 FAAP100Q0VG06 881 aa6.95□□□□□ -1.3
HPS3-205ENST00000478525 BNIP3Q12983 259 aa6.95□□□□□ -1.3
HPS3-205ENST00000478525 CYP27C1Q4G0S4 372 aa6.95□□□□□ -1.3
HPS3-205ENST00000478525 GLYCTKQ8IVS8 523 aa6.95□□□□□ -1.3
HPS3-205ENST00000478525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.95□□□□□ -1.3
HPS3-205ENST00000478525 CARMIL2Q6F5E8 1435 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 NDUFB5O43674 189 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 ZNF862O60290 1169 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 ZNF157P51786 506 aaPredicted RBP6.94□□□□□ -1.3
HPS3-205ENST00000478525 MISP3Q96FF7 219 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 FANCD2OSQ96PS1 177 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 KRTAP4-2Q9BYR5 136 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 ZC3H12CQ9C0D7 883 aaKnown RBP6.94□□□□□ -1.3
HPS3-205ENST00000478525 PIDD1Q9HB75 910 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 PCDHGC5Q9Y5F6 944 aa6.94□□□□□ -1.3
HPS3-205ENST00000478525 GPR182O15218 404 aa6.93□□□□□ -1.3
HPS3-205ENST00000478525 FUT4P22083 530 aa6.93□□□□□ -1.3
HPS3-205ENST00000478525 ID3Q02535 119 aa6.93□□□□□ -1.3
HPS3-205ENST00000478525 RPS26P11Q5JNZ5 115 aaPredicted RBP6.93□□□□□ -1.3
HPS3-205ENST00000478525 ZNF648Q5T619 568 aaPredicted RBP6.93□□□□□ -1.3
HPS3-205ENST00000478525 NETO1Q8TDF5 533 aa6.93□□□□□ -1.3
HPS3-205ENST00000478525 CCDC74AQ96AQ1 378 aa6.93□□□□□ -1.3
HPS3-205ENST00000478525 ATXN3LQ9H3M9 355 aa6.93□□□□□ -1.3
HPS3-205ENST00000478525 TMEM238LA0A1B0GVL6 79 aa6.92□□□□□ -1.3
HPS3-205ENST00000478525 IGHA2P01877 340 aa6.92□□□□□ -1.3
HPS3-205ENST00000478525 CD8BP10966 210 aa6.92□□□□□ -1.3
HPS3-205ENST00000478525 CD96P40200 585 aa6.92□□□□□ -1.3
HPS3-205ENST00000478525 PDE3BQ13370 1112 aa6.92□□□□□ -1.3
HPS3-205ENST00000478525 GLIS3Q8NEA6 775 aa6.92□□□□□ -1.3
HPS3-205ENST00000478525 DISC1Q9NRI5 854 aa6.92□□□□□ -1.3
HPS3-205ENST00000478525 ADAMTS6Q9UKP5 1117 aa6.92□□□□□ -1.3
HPS3-205ENST00000478525 BIN1O00499 593 aa6.91□□□□□ -1.3
HPS3-205ENST00000478525 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
HPS3-205ENST00000478525 GADD45BO75293 160 aaPredicted RBP6.91□□□□□ -1.3
HPS3-205ENST00000478525 LEFTY1O75610 366 aa6.91□□□□□ -1.3
HPS3-205ENST00000478525 GSTP1P09211 210 aaKnown RBP6.91□□□□□ -1.3
HPS3-205ENST00000478525 GRM2Q14416 872 aa6.91□□□□□ -1.3
HPS3-205ENST00000478525 KIF4BQ2VIQ3 1234 aa6.91□□□□□ -1.3
HPS3-205ENST00000478525 SMYD4Q8IYR2 804 aaPredicted RBP6.91□□□□□ -1.3
HPS3-205ENST00000478525 RC3H2Q9HBD1 1191 aaKnown RBP6.91□□□□□ -1.3
HPS3-205ENST00000478525 MBNL3Q9NUK0 354 aaKnown RBP6.91□□□□□ -1.3
HPS3-205ENST00000478525 RNASE1P07998 156 aaKnown RBP6.9□□□□□ -1.3
HPS3-205ENST00000478525 HCLS1P14317 486 aaPredicted RBP6.9□□□□□ -1.3
HPS3-205ENST00000478525 TTLL4Q14679 1199 aa6.9□□□□□ -1.3
HPS3-205ENST00000478525 ATG4DQ86TL0 474 aaPredicted RBP6.9□□□□□ -1.3
HPS3-205ENST00000478525 DNAJC25Q9H1X3 360 aa6.9□□□□□ -1.3
HPS3-205ENST00000478525 KRT82Q9NSB4 513 aa6.9□□□□□ -1.3
HPS3-205ENST00000478525 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
HPS3-205ENST00000478525 SLFN14P0C7P3 912 aa6.89□□□□□ -1.31
HPS3-205ENST00000478525 PRKCQQ04759 706 aa6.89□□□□□ -1.31
HPS3-205ENST00000478525 ZNF124Q15973 351 aa6.89□□□□□ -1.31
HPS3-205ENST00000478525 B4GALNT3Q6L9W6 998 aa6.89□□□□□ -1.31
HPS3-205ENST00000478525 PDZD3Q86UT5 571 aa6.89□□□□□ -1.31
HPS3-205ENST00000478525 NIF3L1Q9GZT8 377 aa6.89□□□□□ -1.31
HPS3-205ENST00000478525 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
HPS3-205ENST00000478525 RNGTTO60942 597 aaKnown RBP6.88□□□□□ -1.31
HPS3-205ENST00000478525 CEACAM5P06731 702 aa6.88□□□□□ -1.31
HPS3-205ENST00000478525 NEFMP07197 916 aa6.88□□□□□ -1.31
HPS3-205ENST00000478525 IFI16Q16666 785 aaKnown RBP6.88□□□□□ -1.31
HPS3-205ENST00000478525 LRRN4CLQ8ND94 238 aa6.88□□□□□ -1.31
HPS3-205ENST00000478525 EPS8L3Q8TE67 593 aaKnown RBP6.88□□□□□ -1.31
HPS3-205ENST00000478525 FAM168AQ92567 244 aa6.88□□□□□ -1.31
HPS3-205ENST00000478525 CITED4Q96RK1 184 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms