RNA–Protein interactions for RNA: ENST00000478404.1

RNF149-204, Transcript of ring finger protein 149, humanhuman

TSL 2

Gene RNF149, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-204ENST00000478404 LMNB2Q03252 620 aa8.05□□□□□ -1.12
RNF149-204ENST00000478404 FBXL19Q6PCT2 694 aa8.05□□□□□ -1.12
RNF149-204ENST00000478404 USP35Q9P2H5 1018 aa8.05□□□□□ -1.12
RNF149-204ENST00000478404 FAM177BA6PVY3 158 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 GREM1O60565 184 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 NID1P14543 1247 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 CAMK2GQ13555 558 aaPredicted RBP8.04□□□□□ -1.12
RNF149-204ENST00000478404 MSL1Q68DK7 614 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 TXNDC11Q6PKC3 985 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 PDZD3Q86UT5 571 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 KIAA0825Q8IV33 1275 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 SULF2Q8IWU5 870 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 RASGRP4Q8TDF6 673 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 ZNF296Q8WUU4 475 aaPredicted RBP8.04□□□□□ -1.12
RNF149-204ENST00000478404 WNT8BQ93098 351 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 EAF1Q96JC9 268 aaPredicted RBP8.04□□□□□ -1.12
RNF149-204ENST00000478404 DRC1Q96MC2 740 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 NRSN2Q9GZP1 204 aa8.04□□□□□ -1.12
RNF149-204ENST00000478404 LINC01387J3KSC0 135 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 CDC25BP30305 580 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 PIP4K2BP78356 416 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 FAM160A1Q05DH4 1040 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 ZNF252P-AS1Q0IIN9 211 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 GNL2Q13823 731 aaKnown RBP8.03□□□□□ -1.12
RNF149-204ENST00000478404 SF3A1Q15459 793 aaKnown RBP8.03□□□□□ -1.12
RNF149-204ENST00000478404 TRIM42Q8IWZ5 723 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 GPRASP2Q96D09 838 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 CYP8B1Q9UNU6 501 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 PCDHB5Q9Y5E4 795 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 UNC13AQ9UPW8 1703 aa8.03□□□□□ -1.12
RNF149-204ENST00000478404 ARNTP27540 789 aa8.02□□□□□ -1.13
RNF149-204ENST00000478404 WFDC8Q8IUA0 241 aa8.02□□□□□ -1.13
RNF149-204ENST00000478404 GRIN3AQ8TCU5 1115 aa8.02□□□□□ -1.13
RNF149-204ENST00000478404 NT5C1AQ9BXI3 368 aa8.02□□□□□ -1.13
RNF149-204ENST00000478404 OSGEPQ9NPF4 335 aa8.02□□□□□ -1.13
RNF149-204ENST00000478404 SAMM50Q9Y512 469 aa8.02□□□□□ -1.13
RNF149-204ENST00000478404 FSCN2O14926 492 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 COBLO75128 1261 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 H2AFB2P0C5Z0 115 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 C19orf57Q0VDD7 668 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 AP3B2Q13367 1082 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 SETDB1Q15047 1291 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 MCTP1Q6DN14 999 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 GOLM1Q8NBJ4 401 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 GAL3ST3Q96A11 431 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 CACNA2D2Q9NY47 1150 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 PRKAG2Q9UGJ0 569 aa8.01□□□□□ -1.13
RNF149-204ENST00000478404 SUPT16HQ9Y5B9 1047 aaKnown RBP8.01□□□□□ -1.13
RNF149-204ENST00000478404 ATF4P18848 351 aaPredicted RBP8□□□□□ -1.13
RNF149-204ENST00000478404 DNAJA1P31689 397 aaKnown RBP8□□□□□ -1.13
RNF149-204ENST00000478404 ARID5AQ03989 594 aa8□□□□□ -1.13
RNF149-204ENST00000478404 LLGL2Q6P1M3 1020 aa8□□□□□ -1.13
RNF149-204ENST00000478404 CCDC84Q86UT8 332 aaPredicted RBP8□□□□□ -1.13
RNF149-204ENST00000478404 DDX54Q8TDD1 881 aaKnown RBP8□□□□□ -1.13
RNF149-204ENST00000478404 CARD10Q9BWT7 1032 aa8□□□□□ -1.13
RNF149-204ENST00000478404 EMILIN2Q9BXX0 1053 aa8□□□□□ -1.13
RNF149-204ENST00000478404 TANGO6Q9C0B7 1094 aa8□□□□□ -1.13
RNF149-204ENST00000478404 ARID1BQ8NFD5 2236 aaPredicted RBP8□□□□□ -1.13
RNF149-204ENST00000478404 FAM221AA4D161 298 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 GSTP1P09211 210 aaKnown RBP7.99□□□□□ -1.13
RNF149-204ENST00000478404 FGRP09769 529 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 YBX3P16989 372 aaKnown RBP eCLIP7.99□□□□□ -1.13
RNF149-204ENST00000478404 CRKP46108 304 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 GSTM4Q03013 218 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 LRRC14Q15048 493 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 SNAP47Q5SQN1 464 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 FAM117BQ6P1L5 589 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 MPRIPQ6WCQ1 1025 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 BNC2Q6ZN30 1099 aaPredicted RBP7.99□□□□□ -1.13
RNF149-204ENST00000478404 FAM196AQ6ZSG2 479 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 DMRTC2Q8IXT2 367 aaPredicted RBP7.99□□□□□ -1.13
RNF149-204ENST00000478404 GALNT11Q8NCW6 608 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 KLHDC7BQ96G42 594 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 KRTAP4-9Q9BYQ8 210 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 UBP1Q9NZI7 540 aa7.99□□□□□ -1.13
RNF149-204ENST00000478404 BICRAQ9NZM4 1560 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 SPDYE3A6NKU9 549 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 DEAF1O75398 565 aaPredicted RBP7.98□□□□□ -1.13
RNF149-204ENST00000478404 ECEL1O95672 775 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 F13A1P00488 732 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 TXKP42681 527 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 ARL4DP49703 201 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 PTPN11Q06124 597 aaPredicted RBP7.98□□□□□ -1.13
RNF149-204ENST00000478404 SEPT6Q14141 434 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 SCARA3Q6AZY7 606 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 MCF2L2Q86YR7 1114 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 KLHL23Q8NBE8 558 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 GATAD2BQ8WXI9 593 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 UBXN4Q92575 508 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 SPATA32Q96LK8 384 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 FMNL2Q96PY5 1086 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 LRRC3Q9BY71 257 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 MIR1-1HGQ9H1L0 117 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 CBX8Q9HC52 389 aa7.98□□□□□ -1.13
RNF149-204ENST00000478404 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
RNF149-204ENST00000478404 CILPO75339 1184 aa7.97□□□□□ -1.13
RNF149-204ENST00000478404 TRIM37O94972 964 aa7.97□□□□□ -1.13
RNF149-204ENST00000478404 APBA3O96018 575 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms