RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 FBXO18Q8NFZ0 1043 aa17.17■□□□□ 0.34
U2AF1-210ENST00000478282 CARD6Q9BX69 1037 aa17.17■□□□□ 0.34
U2AF1-210ENST00000478282 PARP3Q9Y6F1 533 aa17.17■□□□□ 0.34
U2AF1-210ENST00000478282 UBASH3AP57075 661 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
U2AF1-210ENST00000478282 MAST3O60307 1309 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 SLC20A2Q08357 652 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 DPF2Q92785 391 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 UBXN6Q9BZV1 441 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 BRWD3Q6RI45 1802 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 SBF2Q86WG5 1849 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 EXOC5O00471 708 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 ANO1Q5XXA6 986 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
U2AF1-210ENST00000478282 TUBE1Q9UJT0 475 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 KCPQ6ZWJ8 1503 aa17.16■□□□□ 0.34
U2AF1-210ENST00000478282 ZSCAN12O43309 604 aa17.15■□□□□ 0.34
U2AF1-210ENST00000478282 SEC31AO94979 1220 aaKnown RBP17.15■□□□□ 0.34
U2AF1-210ENST00000478282 ZNF831Q5JPB2 1677 aa17.15■□□□□ 0.34
U2AF1-210ENST00000478282 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
U2AF1-210ENST00000478282 POLR3GO15318 223 aaPredicted RBP17.15■□□□□ 0.34
U2AF1-210ENST00000478282 SERPINC1P01008 464 aa17.15■□□□□ 0.34
U2AF1-210ENST00000478282 MYL5Q02045 173 aa17.15■□□□□ 0.34
U2AF1-210ENST00000478282 ISM2Q6H9L7 571 aa17.15■□□□□ 0.34
U2AF1-210ENST00000478282 VSTM4Q8IW00 320 aa17.15■□□□□ 0.34
U2AF1-210ENST00000478282 GPHNQ9NQX3 736 aaPredicted RBP17.15■□□□□ 0.34
U2AF1-210ENST00000478282 NHSQ6T4R5 1651 aa17.15■□□□□ 0.34
U2AF1-210ENST00000478282 CAPN2P17655 700 aa17.14■□□□□ 0.34
U2AF1-210ENST00000478282 SLC39A6Q13433 755 aa17.14■□□□□ 0.34
U2AF1-210ENST00000478282 DHX16O60231 1041 aaKnown RBP17.14■□□□□ 0.33
U2AF1-210ENST00000478282 CFAP100Q494V2 611 aa17.14■□□□□ 0.33
U2AF1-210ENST00000478282 MPHOSPH8Q99549 860 aa17.14■□□□□ 0.33
U2AF1-210ENST00000478282 VWA3AA6NCI4 1184 aa17.14■□□□□ 0.33
U2AF1-210ENST00000478282 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
U2AF1-210ENST00000478282 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
U2AF1-210ENST00000478282 TBC1D8O95759 1140 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 DDB1Q16531 1140 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 TXLNBQ8N3L3 684 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 NEUROD6Q96NK8 337 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 RNF113AO15541 343 aaKnown RBP17.13■□□□□ 0.33
U2AF1-210ENST00000478282 ARHGAP6O43182 974 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 WDHD1O75717 1129 aaPredicted RBP17.13■□□□□ 0.33
U2AF1-210ENST00000478282 TOP1P11387 765 aaKnown RBP17.13■□□□□ 0.33
U2AF1-210ENST00000478282 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
U2AF1-210ENST00000478282 LRP10Q7Z4F1 713 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 SASH3O75995 380 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 SYKP43405 635 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 CC2D1AQ6P1N0 951 aaPredicted RBP17.13■□□□□ 0.33
U2AF1-210ENST00000478282 TMEM139Q8IV31 216 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 PPP2R2CQ9Y2T4 447 aa17.13■□□□□ 0.33
U2AF1-210ENST00000478282 SPEF2Q9C093 1822 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 DDX60Q8IY21 1712 aaKnown RBP17.12■□□□□ 0.33
U2AF1-210ENST00000478282 A0A087WZG4 1122 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 GOLGA8BA8MQT2 603 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 MYO1BO43795 1136 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
U2AF1-210ENST00000478282 GPR161Q8N6U8 529 aaKnown RBP17.12■□□□□ 0.33
U2AF1-210ENST00000478282 NEK11Q8NG66 645 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 M0R2C6 588 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 ZNF772Q68DY9 489 aaPredicted RBP17.12■□□□□ 0.33
U2AF1-210ENST00000478282 TSPYL1Q9H0U9 437 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 GJB4Q9NTQ9 266 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 HPSEQ9Y251 543 aa17.12■□□□□ 0.33
U2AF1-210ENST00000478282 OAS2P29728 719 aaKnown RBP17.11■□□□□ 0.33
U2AF1-210ENST00000478282 CASP7P55210 303 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 QTRT2Q9H974 415 aaKnown RBP17.11■□□□□ 0.33
U2AF1-210ENST00000478282 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
U2AF1-210ENST00000478282 GOLGA6L9A6NEM1 432 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 TMEM232C9JQI7 657 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 MARCKSP29966 332 aaPredicted RBP17.11■□□□□ 0.33
U2AF1-210ENST00000478282 MAP3K9P80192 1104 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 GPR108Q9NPR9 543 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 CASQ1P31415 396 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 MUM1L1Q5H9M0 696 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 ATG9AQ7Z3C6 839 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
U2AF1-210ENST00000478282 CPLX1O14810 134 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 PRC1O43663 620 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 TIMM10P62072 90 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 ST5P78524 1137 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 RAD51AP2Q09MP3 1159 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 FAM177A1Q8N128 213 aaPredicted RBP17.1■□□□□ 0.33
U2AF1-210ENST00000478282 SMARCE1Q969G3 411 aa17.1■□□□□ 0.33
U2AF1-210ENST00000478282 ATP5J2-PTCD1G3V325 749 aa17.09■□□□□ 0.33
U2AF1-210ENST00000478282 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms