RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 CDC5LQ99459 802 aaKnown RBP11.26□□□□□ -0.61
COL13A1-207ENST00000478219 TEX13AQ9BXU3 409 aaPredicted RBP11.26□□□□□ -0.61
COL13A1-207ENST00000478219 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
COL13A1-207ENST00000478219 KRT32Q14532 448 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 AFAP1L1Q8TED9 768 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 ZNF609O15014 1411 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 TSPOAP1O95153 1857 aa11.26□□□□□ -0.61
COL13A1-207ENST00000478219 KCNQ3O43525 872 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 ERLIN1O75477 346 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 PDIA3P30101 505 aaKnown RBP11.25□□□□□ -0.61
COL13A1-207ENST00000478219 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 FMR1Q06787 632 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL13A1-207ENST00000478219 TEFQ10587 303 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 NCAPH2Q6IBW4 605 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 TRMT44Q8IYL2 757 aaKnown RBP11.25□□□□□ -0.61
COL13A1-207ENST00000478219 KAT14Q9H8E8 782 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 FAM169AQ9Y6X4 670 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 EIF5P55010 431 aaKnown RBP11.25□□□□□ -0.61
COL13A1-207ENST00000478219 KIF4BQ2VIQ3 1234 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 METTL16Q86W50 562 aaKnown RBP11.25□□□□□ -0.61
COL13A1-207ENST00000478219 SLC35F6Q8N357 371 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 CEP112Q8N8E3 955 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 MED15Q96RN5 788 aa11.25□□□□□ -0.61
COL13A1-207ENST00000478219 CCDC189A1A4V9 331 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 ZMYND10O75800 440 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 SCP2P22307 547 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 ZNF827Q17R98 1081 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 SPECC1LQ69YQ0 1117 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 TTC19Q6DKK2 380 aaPredicted RBP11.24□□□□□ -0.61
COL13A1-207ENST00000478219 CPLX2Q6PUV4 134 aaKnown RBP11.24□□□□□ -0.61
COL13A1-207ENST00000478219 DHX32Q7L7V1 743 aaKnown RBP11.24□□□□□ -0.61
COL13A1-207ENST00000478219 KCNG4Q8TDN1 519 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 CCDC175P0C221 793 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 SHC4Q6S5L8 630 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 GSPT2Q8IYD1 628 aaKnown RBP11.24□□□□□ -0.61
COL13A1-207ENST00000478219 CPLX3Q8WVH0 158 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 JPH2Q9BR39 696 aaPredicted RBP11.24□□□□□ -0.61
COL13A1-207ENST00000478219 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 C19orf44Q9H6X5 657 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 MED4Q9NPJ6 270 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
COL13A1-207ENST00000478219 OVOS2A0A0J9YW53 1432 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 OVOS2Q6IE36 1432 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 KDRP35968 1356 aa11.24□□□□□ -0.61
COL13A1-207ENST00000478219 TEX33O43247 280 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 CMA1P23946 247 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 SYKP43405 635 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 EXOSC10Q01780 885 aaKnown RBP11.23□□□□□ -0.61
COL13A1-207ENST00000478219 LONRF3Q496Y0 759 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL13A1-207ENST00000478219 SUCLG2Q96I99 432 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 HINFPQ9BQA5 517 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 SAMSN1Q9NSI8 373 aaKnown RBP11.23□□□□□ -0.61
COL13A1-207ENST00000478219 PCDHA5Q9Y5H7 936 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 LRRC37A3O60309 1634 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 AGPSO00116 658 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 MYO1FO00160 1098 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 A1BGP04217 495 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 GGCXP38435 758 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 ACRBPQ8NEB7 543 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 RAI14Q9P0K7 980 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 HPCAL4Q9UM19 191 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 SAMM50Q9Y512 469 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 YEATS4O95619 227 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL13A1-207ENST00000478219 IRAK1P51617 712 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 PROSER3Q2NL68 480 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 MAP3K2Q9Y2U5 619 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 NFE2L3Q9Y4A8 694 aa11.23□□□□□ -0.61
COL13A1-207ENST00000478219 CTAGE15A4D2H0 777 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 KIF5CO60282 957 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 CTAGE8P0CG41 777 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 MYBL2P10244 700 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 ZNF18P17022 549 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 G3BP1Q13283 466 aaKnown RBP eCLIP11.22□□□□□ -0.61
COL13A1-207ENST00000478219 SPECC1Q5M775 1068 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 DDX46Q7L014 1031 aaKnown RBP11.22□□□□□ -0.61
COL13A1-207ENST00000478219 CTAGE6Q86UF2 777 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 CTAGE4Q8IX94 777 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
COL13A1-207ENST00000478219 SPATA31D1Q6ZQQ2 1576 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 CTAGE9A4FU28 777 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 SHOX2O60902 331 aaPredicted RBP11.22□□□□□ -0.61
COL13A1-207ENST00000478219 AKAP17AQ02040 695 aaKnown RBP11.22□□□□□ -0.61
COL13A1-207ENST00000478219 RBL2Q08999 1139 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
COL13A1-207ENST00000478219 AIFM3Q96NN9 605 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 AGXT2Q9BYV1 514 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 CD248Q9HCU0 757 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 DBNLQ9UJU6 430 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms