RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 KIF3CO14782 793 aa24.1■■□□□ 1.45
ACTB-210ENST00000477812 POTEIP0CG38 1075 aa24.1■■□□□ 1.45
ACTB-210ENST00000477812 POTEJP0CG39 1038 aa24.1■■□□□ 1.45
ACTB-210ENST00000477812 BTDP43251 543 aa24.1■■□□□ 1.45
ACTB-210ENST00000477812 RHBDL3P58872 404 aa24.1■■□□□ 1.45
ACTB-210ENST00000477812 PPP4CP60510 307 aa24.1■■□□□ 1.45
ACTB-210ENST00000477812 PGAP2Q9UHJ9 254 aa24.1■■□□□ 1.45
ACTB-210ENST00000477812 SPDYE2Q495Y8 402 aa24.09■■□□□ 1.45
ACTB-210ENST00000477812 ZMYM1Q5SVZ6 1142 aa24.09■■□□□ 1.45
ACTB-210ENST00000477812 CDC42EP5Q6NZY7 148 aa24.09■■□□□ 1.45
ACTB-210ENST00000477812 APPBP2Q92624 585 aa24.09■■□□□ 1.45
ACTB-210ENST00000477812 RIOK1Q9BRS2 568 aaKnown RBP24.09■■□□□ 1.45
ACTB-210ENST00000477812 LRRFIP1Q32MZ4 808 aaKnown RBP24.08■■□□□ 1.45
ACTB-210ENST00000477812 MIGA1Q8NAN2 632 aa24.08■■□□□ 1.45
ACTB-210ENST00000477812 ZC3H15Q8WU90 426 aaKnown RBP24.08■■□□□ 1.45
ACTB-210ENST00000477812 OSBP2Q969R2 916 aa24.08■■□□□ 1.45
ACTB-210ENST00000477812 TDRD3Q9H7E2 651 aaKnown RBP24.08■■□□□ 1.45
ACTB-210ENST00000477812 EAPPQ56P03 285 aaPredicted RBP24.07■■□□□ 1.44
ACTB-210ENST00000477812 PUS7LQ9H0K6 701 aaKnown RBP24.07■■□□□ 1.44
ACTB-210ENST00000477812 AATFQ9NY61 560 aaKnown RBP eCLIP24.07■■□□□ 1.443e-17■□□□□ 10.5
ACTB-210ENST00000477812 GGA3Q9NZ52 723 aa24.07■■□□□ 1.44
ACTB-210ENST00000477812 ZNF70Q9UC06 446 aaPredicted RBP24.07■■□□□ 1.44
ACTB-210ENST00000477812 CLRN2A0PK11 232 aa24.06■■□□□ 1.44
ACTB-210ENST00000477812 DYNLL1P63167 89 aaKnown RBP24.06■■□□□ 1.44
ACTB-210ENST00000477812 FAM227BQ96M60 508 aa24.06■■□□□ 1.44
ACTB-210ENST00000477812 PITPNM2Q9BZ72 1349 aa24.06■■□□□ 1.44
ACTB-210ENST00000477812 A0A0D9SFI3 127 aa24.05■■□□□ 1.44
ACTB-210ENST00000477812 WDHD1O75717 1129 aaPredicted RBP24.05■■□□□ 1.44
ACTB-210ENST00000477812 ANGEL2Q5VTE6 544 aaKnown RBP24.05■■□□□ 1.44
ACTB-210ENST00000477812 LDHDQ86WU2 507 aa24.05■■□□□ 1.44
ACTB-210ENST00000477812 SH3RF3Q8TEJ3 882 aaPredicted RBP24.05■■□□□ 1.44
ACTB-210ENST00000477812 SEC62Q99442 399 aaKnown RBP24.05■■□□□ 1.44
ACTB-210ENST00000477812 USP40Q9NVE5 1235 aa24.05■■□□□ 1.44
ACTB-210ENST00000477812 MAGEB6P1A0A0J9YX57 407 aa24.04■■□□□ 1.44
ACTB-210ENST00000477812 M0R2C6 588 aa24.04■■□□□ 1.44
ACTB-210ENST00000477812 MYO1BO43795 1136 aa24.04■■□□□ 1.44
ACTB-210ENST00000477812 MBD4O95243 580 aa24.04■■□□□ 1.44
ACTB-210ENST00000477812 BAG3O95817 575 aa24.04■■□□□ 1.44
ACTB-210ENST00000477812 NMIQ13287 307 aaPredicted RBP24.04■■□□□ 1.44
ACTB-210ENST00000477812 LCORLQ8N3X6 602 aa24.04■■□□□ 1.44
ACTB-210ENST00000477812 CDK5RAP2Q96SN8 1893 aa24.03■■□□□ 1.44
ACTB-210ENST00000477812 CHMLP26374 656 aa24.03■■□□□ 1.44
ACTB-210ENST00000477812 CACNB3P54284 484 aa24.03■■□□□ 1.44
ACTB-210ENST00000477812 NFIAQ12857 509 aa24.03■■□□□ 1.44
ACTB-210ENST00000477812 FKBP1CQ5VVH2 108 aa24.03■■□□□ 1.44
ACTB-210ENST00000477812 CERS3Q8IU89 383 aa24.03■■□□□ 1.44
ACTB-210ENST00000477812 FOCADQ5VW36 1801 aa24.03■■□□□ 1.44
ACTB-210ENST00000477812 HIP1O00291 1037 aa24.02■■□□□ 1.44
ACTB-210ENST00000477812 PLCG2P16885 1265 aa24.02■■□□□ 1.44
ACTB-210ENST00000477812 NOL10Q9BSC4 688 aaKnown RBP24.02■■□□□ 1.44
ACTB-210ENST00000477812 IDI2Q9BXS1 227 aa24.02■■□□□ 1.44
ACTB-210ENST00000477812 ARMT1Q9H993 441 aa24.02■■□□□ 1.44
ACTB-210ENST00000477812 HELLSQ9NRZ9 838 aa24.02■■□□□ 1.44
ACTB-210ENST00000477812 CNTNAP1P78357 1384 aa24.02■■□□□ 1.44
ACTB-210ENST00000477812 GPAA1O43292 621 aa24.01■■□□□ 1.43
ACTB-210ENST00000477812 APOBEC3FQ8IUX4 373 aaKnown RBP24.01■■□□□ 1.43
ACTB-210ENST00000477812 STRBPQ96SI9 672 aaKnown RBP24.01■■□□□ 1.43
ACTB-210ENST00000477812 IL25Q9H293 177 aa24.01■■□□□ 1.43
ACTB-210ENST00000477812 DIAPH3Q9NSV4 1193 aa24.01■■□□□ 1.43
ACTB-210ENST00000477812 FAM198AQ9UFP1 575 aa24.01■■□□□ 1.43
ACTB-210ENST00000477812 NPM3O75607 178 aaKnown RBP24■■□□□ 1.43
ACTB-210ENST00000477812 TEX11Q8IYF3 940 aa24■■□□□ 1.43
ACTB-210ENST00000477812 AIDAQ96BJ3 306 aa24■■□□□ 1.43
ACTB-210ENST00000477812 VEZTQ9HBM0 779 aa24■■□□□ 1.43
ACTB-210ENST00000477812 DDX4Q9NQI0 724 aaKnown RBP24■■□□□ 1.43
ACTB-210ENST00000477812 SCAF8Q9UPN6 1271 aaKnown RBP24■■□□□ 1.43
ACTB-210ENST00000477812 DDX60LQ5H9U9 1706 aaKnown RBP24■■□□□ 1.43
ACTB-210ENST00000477812 MCMDC2Q4G0Z9 681 aa23.99■■□□□ 1.43
ACTB-210ENST00000477812 MAP1SQ66K74 1059 aaPredicted RBP23.99■■□□□ 1.43
ACTB-210ENST00000477812 CWC27Q6UX04 472 aaKnown RBP23.99■■□□□ 1.43
ACTB-210ENST00000477812 ZNF589Q86UQ0 364 aaPredicted RBP23.99■■□□□ 1.43
ACTB-210ENST00000477812 DCPSQ96C86 337 aaKnown RBP23.99■■□□□ 1.43
ACTB-210ENST00000477812 TMOD2Q9NZR1 351 aa23.99■■□□□ 1.43
ACTB-210ENST00000477812 POLR2AP24928 1970 aaKnown RBP23.99■■□□□ 1.43
ACTB-210ENST00000477812 TCP10L2B9ZVM9 353 aa23.98■■□□□ 1.43
ACTB-210ENST00000477812 FOXP2O15409 715 aa23.98■■□□□ 1.43
ACTB-210ENST00000477812 CHADLQ6NUI6 762 aa23.98■■□□□ 1.43
ACTB-210ENST00000477812 CCDC129Q6ZRS4 1044 aa23.98■■□□□ 1.43
ACTB-210ENST00000477812 FAM83AQ86UY5 434 aa23.98■■□□□ 1.43
ACTB-210ENST00000477812 MKRN1Q9UHC7 482 aaKnown RBP23.98■■□□□ 1.43
ACTB-210ENST00000477812 ADM5C9JUS6 153 aa23.97■■□□□ 1.43
ACTB-210ENST00000477812 PRKAB2O43741 272 aa23.97■■□□□ 1.43
ACTB-210ENST00000477812 CDC45O75419 566 aa23.97■■□□□ 1.43
ACTB-210ENST00000477812 COL2A1P02458 1487 aaPredicted RBP23.97■■□□□ 1.43
ACTB-210ENST00000477812 FLT1P17948 1338 aa23.97■■□□□ 1.43
ACTB-210ENST00000477812 KRT26Q7Z3Y9 468 aa23.97■■□□□ 1.43
ACTB-210ENST00000477812 CRNKL1Q9BZJ0 848 aaKnown RBP23.97■■□□□ 1.43
ACTB-210ENST00000477812 DEFB129Q9H1M3 183 aa23.97■■□□□ 1.43
ACTB-210ENST00000477812 CLEC11AQ9Y240 323 aa23.97■■□□□ 1.43
ACTB-210ENST00000477812 RPAP1Q9BWH6 1393 aaPredicted RBP23.96■■□□□ 1.43
ACTB-210ENST00000477812 RAD50Q92878 1312 aa23.96■■□□□ 1.43
ACTB-210ENST00000477812 ENTPD3O75355 529 aa23.96■■□□□ 1.43
ACTB-210ENST00000477812 TNFAIP1Q13829 316 aa23.96■■□□□ 1.43
ACTB-210ENST00000477812 RASA3Q14644 834 aa23.96■■□□□ 1.43
ACTB-210ENST00000477812 ZFPM1Q8IX07 1006 aa23.96■■□□□ 1.43
ACTB-210ENST00000477812 TGFBRAP1Q8WUH2 860 aa23.96■■□□□ 1.43
ACTB-210ENST00000477812 TEPSINQ96N21 525 aa23.96■■□□□ 1.43
ACTB-210ENST00000477812 GLIS2Q9BZE0 524 aaPredicted RBP23.96■■□□□ 1.43
ACTB-210ENST00000477812 ATRNL1Q5VV63 1379 aa23.95■■□□□ 1.42
ACTB-210ENST00000477812 CCDC171Q6TFL3 1326 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms